EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000000211 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
13682 bases
Position
chrKQ557222.1:15562354-15576035
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000000221RRM_1PF00076.225.6e-3112
ENSXCOP00000000221RRM_1PF00076.225.6e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000000227RBMS1 (1 of many)-2011101-ENSXCOP00000000221366 (aa)--
Gene Model
Click here to download ENSXCOG00000000211's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000211's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000000211RBMS18672.871ENSXCOG00000006995rbms2b8772.727
ENSXCOG00000000211RBMS19458.427ENSXCOG00000019600-8458.754
ENSXCOG00000000211RBMS19365.698ENSXCOG00000001659rbms1a8965.698
ENSXCOG00000000211RBMS19461.254ENSXCOG00000018635rbms2a9964.444
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000000211RBMS19575.852ENSG00000153250RBMS18392.453Homo_sapiens
ENSXCOG00000000211RBMS19369.767ENSAPOG00000013761rbms1a8969.767Acanthochromis_polyacanthus
ENSXCOG00000000211RBMS19587.393ENSAPOG00000024437-8887.393Acanthochromis_polyacanthus
ENSXCOG00000000211RBMS19573.876ENSAMEG00000012661RBMS19273.876Ailuropoda_melanoleuca
ENSXCOG00000000211RBMS19586.819ENSACIG00000021498RBMS18886.819Amphilophus_citrinellus
ENSXCOG00000000211RBMS19361.919ENSACIG00000000113rbms1a8961.919Amphilophus_citrinellus
ENSXCOG00000000211RBMS19369.767ENSAOCG00000010066rbms1a8969.767Amphiprion_ocellaris
ENSXCOG00000000211RBMS19587.393ENSAOCG00000014482-9581.616Amphiprion_ocellaris
ENSXCOG00000000211RBMS19587.393ENSAPEG00000018371-8887.393Amphiprion_percula
ENSXCOG00000000211RBMS19369.767ENSAPEG00000023563rbms1a8969.767Amphiprion_percula
ENSXCOG00000000211RBMS19368.023ENSATEG00000015450rbms1a8968.023Anabas_testudineus
ENSXCOG00000000211RBMS110084.511ENSATEG00000018573RBMS18986.246Anabas_testudineus
ENSXCOG00000000211RBMS19576.705ENSAPLG00000007282RBMS18876.705Anas_platyrhynchos
ENSXCOG00000000211RBMS110076.800ENSACAG00000011984RBMS17377.273Anolis_carolinensis
ENSXCOG00000000211RBMS18675.155ENSANAG00000024424RBMS110075.155Aotus_nancymaae
ENSXCOG00000000211RBMS110086.179ENSACLG00000013048RBMS18986.246Astatotilapia_calliptera
ENSXCOG00000000211RBMS19368.895ENSACLG00000021512rbms1a9068.895Astatotilapia_calliptera
ENSXCOG00000000211RBMS110077.027ENSAMXG00000009969RBMS19478.797Astyanax_mexicanus
ENSXCOG00000000211RBMS19574.138ENSAMXG00000002146rbms1a8874.138Astyanax_mexicanus
ENSXCOG00000000211RBMS19575.568ENSBTAG00000005180RBMS18775.568Bos_taurus
ENSXCOG00000000211RBMS19575.852ENSCJAG00000014861-8975.284Callithrix_jacchus
ENSXCOG00000000211RBMS110073.190ENSCJAG00000012871-9373.011Callithrix_jacchus
ENSXCOG00000000211RBMS19970.652ENSCJAG00000022465-9571.143Callithrix_jacchus
ENSXCOG00000000211RBMS19575.284ENSCAFG00000009922RBMS18775.284Canis_familiaris
ENSXCOG00000000211RBMS19574.716ENSCAFG00020006120RBMS18774.716Canis_lupus_dingo
ENSXCOG00000000211RBMS19575.000ENSCHIG00000023380RBMS18775.000Capra_hircus
ENSXCOG00000000211RBMS19575.852ENSTSYG00000005584RBMS19475.284Carlito_syrichta
ENSXCOG00000000211RBMS19575.568ENSCPOG00000012310RBMS19371.739Cavia_porcellus
ENSXCOG00000000211RBMS19575.852ENSCCAG00000033841RBMS19175.852Cebus_capucinus
ENSXCOG00000000211RBMS19575.852ENSCATG00000043032RBMS19475.284Cercocebus_atys
ENSXCOG00000000211RBMS19575.284ENSCLAG00000003031RBMS19571.467Chinchilla_lanigera
ENSXCOG00000000211RBMS19575.852ENSCSAG00000015687RBMS18775.852Chlorocebus_sabaeus
ENSXCOG00000000211RBMS19578.125ENSCPBG00000026455RBMS18878.125Chrysemys_picta_bellii
ENSXCOG00000000211RBMS19575.852ENSCANG00000042152RBMS19475.284Colobus_angolensis_palliatus
ENSXCOG00000000211RBMS19575.000ENSCGRG00001022833Rbms18775.000Cricetulus_griseus_chok1gshd
ENSXCOG00000000211RBMS19575.000ENSCGRG00000008824Rbms19371.739Cricetulus_griseus_crigri
ENSXCOG00000000211RBMS19367.151ENSCSEG00000000889rbms1a9067.151Cynoglossus_semilaevis
ENSXCOG00000000211RBMS110082.749ENSCSEG00000010652RBMS19482.808Cynoglossus_semilaevis
ENSXCOG00000000211RBMS19368.314ENSCVAG00000014698rbms1a8968.314Cyprinodon_variegatus
ENSXCOG00000000211RBMS110090.761ENSCVAG00000002027RBMS19691.977Cyprinodon_variegatus
ENSXCOG00000000211RBMS19573.639ENSDARG00000074023rbms1a8773.639Danio_rerio
ENSXCOG00000000211RBMS19572.554ENSDNOG00000040691RBMS19572.554Dasypus_novemcinctus
ENSXCOG00000000211RBMS19575.568ENSDORG00000007103Rbms19571.739Dipodomys_ordii
ENSXCOG00000000211RBMS19566.193ENSETEG00000012135RBMS19266.193Echinops_telfairi
ENSXCOG00000000211RBMS19575.284ENSEASG00005023132RBMS18775.284Equus_asinus_asinus
ENSXCOG00000000211RBMS19575.284ENSECAG00000019894RBMS18775.284Equus_caballus
ENSXCOG00000000211RBMS17287.755ENSEEUG00000005628RBMS16687.755Erinaceus_europaeus
ENSXCOG00000000211RBMS19368.406ENSELUG00000018923rbms1a9468.406Esox_lucius
ENSXCOG00000000211RBMS19569.914ENSELUG00000019328RBMS18669.914Esox_lucius
ENSXCOG00000000211RBMS19575.000ENSFCAG00000012524RBMS19474.432Felis_catus
ENSXCOG00000000211RBMS19576.989ENSFALG00000004440RBMS19476.989Ficedula_albicollis
ENSXCOG00000000211RBMS19575.568ENSFDAG00000015692RBMS19371.739Fukomys_damarensis
ENSXCOG00000000211RBMS19591.977ENSFHEG00000000720RBMS18991.977Fundulus_heteroclitus
ENSXCOG00000000211RBMS19368.314ENSFHEG00000005662rbms1a8081.013Fundulus_heteroclitus
ENSXCOG00000000211RBMS19464.986ENSGMOG00000000525rbms1a9964.986Gadus_morhua
ENSXCOG00000000211RBMS19577.557ENSGALG00000011132RBMS19477.557Gallus_gallus
ENSXCOG00000000211RBMS19368.605ENSGAFG00000011633rbms1a9568.605Gambusia_affinis
ENSXCOG00000000211RBMS110097.814ENSGAFG00000007708RBMS19397.814Gambusia_affinis
ENSXCOG00000000211RBMS19763.830ENSGACG00000015174rbms1a9069.159Gasterosteus_aculeatus
ENSXCOG00000000211RBMS19585.920ENSGACG00000005671RBMS18985.673Gasterosteus_aculeatus
ENSXCOG00000000211RBMS110077.480ENSGAGG00000007866RBMS18878.125Gopherus_agassizii
ENSXCOG00000000211RBMS19573.864ENSGGOG00000043756-8773.864Gorilla_gorilla
ENSXCOG00000000211RBMS19575.852ENSGGOG00000001264RBMS19475.284Gorilla_gorilla
ENSXCOG00000000211RBMS18987.423ENSHBUG00000004516RBMS19287.423Haplochromis_burtoni
ENSXCOG00000000211RBMS19368.895ENSHBUG00000004802rbms1a9068.895Haplochromis_burtoni
ENSXCOG00000000211RBMS19575.284ENSHGLG00000010387RBMS19371.467Heterocephalus_glaber_female
ENSXCOG00000000211RBMS19575.284ENSHGLG00100014105RBMS19371.467Heterocephalus_glaber_male
ENSXCOG00000000211RBMS19368.314ENSHCOG00000020097rbms1a8968.314Hippocampus_comes
ENSXCOG00000000211RBMS19581.375ENSHCOG00000016668RBMS18881.375Hippocampus_comes
ENSXCOG00000000211RBMS19573.563ENSIPUG00000010131RBMS18873.563Ictalurus_punctatus
ENSXCOG00000000211RBMS110078.591ENSIPUG00000014677RBMS18879.943Ictalurus_punctatus
ENSXCOG00000000211RBMS19575.852ENSSTOG00000012501RBMS19372.011Ictidomys_tridecemlineatus
ENSXCOG00000000211RBMS19574.716ENSJJAG00000016543Rbms19571.467Jaculus_jaculus
ENSXCOG00000000211RBMS19587.679ENSKMAG00000013911RBMS18887.679Kryptolebias_marmoratus
ENSXCOG00000000211RBMS19367.246ENSKMAG00000011839-8967.246Kryptolebias_marmoratus
ENSXCOG00000000211RBMS19584.814ENSLBEG00000005787RBMS18884.814Labrus_bergylta
ENSXCOG00000000211RBMS19368.605ENSLBEG00000025962rbms1a8968.605Labrus_bergylta
ENSXCOG00000000211RBMS110075.332ENSLACG00000004324RBMS110067.698Latimeria_chalumnae
ENSXCOG00000000211RBMS19581.662ENSLOCG00000008622rbms1a8881.662Lepisosteus_oculatus
ENSXCOG00000000211RBMS19574.432ENSLAFG00000017217RBMS19274.432Loxodonta_africana
ENSXCOG00000000211RBMS19575.852ENSMFAG00000000274RBMS19475.284Macaca_fascicularis
ENSXCOG00000000211RBMS19575.852ENSMMUG00000016825RBMS19275.852Macaca_mulatta
ENSXCOG00000000211RBMS19575.852ENSMNEG00000039425RBMS19475.284Macaca_nemestrina
ENSXCOG00000000211RBMS19575.568ENSMLEG00000031517RBMS19475.000Mandrillus_leucophaeus
ENSXCOG00000000211RBMS19485.014ENSMAMG00000003159-9284.527Mastacembelus_armatus
ENSXCOG00000000211RBMS19366.860ENSMAMG00000005018rbms1a8966.860Mastacembelus_armatus
ENSXCOG00000000211RBMS18986.810ENSMZEG00005007313RBMS19186.810Maylandia_zebra
ENSXCOG00000000211RBMS19368.895ENSMZEG00005005661rbms1a9068.895Maylandia_zebra
ENSXCOG00000000211RBMS19577.557ENSMGAG00000011054RBMS110076.900Meleagris_gallopavo
ENSXCOG00000000211RBMS19575.000ENSMAUG00000008550Rbms18775.000Mesocricetus_auratus
ENSXCOG00000000211RBMS19575.000ENSMICG00000008325RBMS19275.000Microcebus_murinus
ENSXCOG00000000211RBMS19574.432ENSMOCG00000022617Rbms19571.196Microtus_ochrogaster
ENSXCOG00000000211RBMS19586.207ENSMMOG00000003707RBMS18885.960Mola_mola
ENSXCOG00000000211RBMS19363.663ENSMMOG00000018249rbms1a8963.663Mola_mola
ENSXCOG00000000211RBMS19576.989ENSMODG00000005250RBMS18776.989Monodelphis_domestica
ENSXCOG00000000211RBMS19185.672ENSMALG00000015715-9084.527Monopterus_albus
ENSXCOG00000000211RBMS19368.012ENSMALG00000014235rbms1a8968.012Monopterus_albus
ENSXCOG00000000211RBMS19574.432MGP_CAROLIEiJ_G0023586Rbms19571.196Mus_caroli
ENSXCOG00000000211RBMS19574.432ENSMUSG00000026970Rbms19571.196Mus_musculus
ENSXCOG00000000211RBMS19574.148MGP_PahariEiJ_G0025037Rbms18774.148Mus_pahari
ENSXCOG00000000211RBMS19574.716MGP_SPRETEiJ_G0024508Rbms19571.467Mus_spretus
ENSXCOG00000000211RBMS19571.739ENSMPUG00000000539RBMS18771.739Mustela_putorius_furo
ENSXCOG00000000211RBMS19571.081ENSMLUG00000008762RBMS18871.081Myotis_lucifugus
ENSXCOG00000000211RBMS19574.432ENSNGAG00000013636Rbms18774.432Nannospalax_galili
ENSXCOG00000000211RBMS18668.987ENSNBRG00000020217rbms1a8569.767Neolamprologus_brichardi
ENSXCOG00000000211RBMS19582.184ENSNBRG00000015151RBMS19481.948Neolamprologus_brichardi
ENSXCOG00000000211RBMS19575.852ENSNLEG00000001667RBMS19475.284Nomascus_leucogenys
ENSXCOG00000000211RBMS18665.217ENSMEUG00000000746RBMS110065.217Notamacropus_eugenii
ENSXCOG00000000211RBMS19568.466ENSOPRG00000012431RBMS18768.466Ochotona_princeps
ENSXCOG00000000211RBMS19574.716ENSODEG00000013934RBMS19571.467Octodon_degus
ENSXCOG00000000211RBMS19767.688ENSONIG00000003329rbms1a8868.314Oreochromis_niloticus
ENSXCOG00000000211RBMS19587.644ENSONIG00000008934RBMS18987.393Oreochromis_niloticus
ENSXCOG00000000211RBMS19577.841ENSOANG00000006166RBMS18977.841Ornithorhynchus_anatinus
ENSXCOG00000000211RBMS15853.909ENSOANG00000004477-9954.098Ornithorhynchus_anatinus
ENSXCOG00000000211RBMS19575.284ENSOCUG00000017365RBMS18275.284Oryctolagus_cuniculus
ENSXCOG00000000211RBMS19366.279ENSORLG00000003917rbms1a9066.279Oryzias_latipes
ENSXCOG00000000211RBMS19584.571ENSORLG00000016818RBMS18984.571Oryzias_latipes
ENSXCOG00000000211RBMS19584.286ENSORLG00020022335RBMS18984.286Oryzias_latipes_hni
ENSXCOG00000000211RBMS19365.988ENSORLG00020018663rbms1a9065.988Oryzias_latipes_hni
ENSXCOG00000000211RBMS19366.279ENSORLG00015016556rbms1a9066.279Oryzias_latipes_hsok
ENSXCOG00000000211RBMS19584.286ENSORLG00015018208RBMS18984.286Oryzias_latipes_hsok
ENSXCOG00000000211RBMS19584.527ENSOMEG00000002394RBMS18884.527Oryzias_melastigma
ENSXCOG00000000211RBMS19574.859ENSOGAG00000002900RBMS19474.859Otolemur_garnettii
ENSXCOG00000000211RBMS19575.000ENSOARG00000006870RBMS19571.351Ovis_aries
ENSXCOG00000000211RBMS19575.852ENSPPAG00000040083RBMS19275.852Pan_paniscus
ENSXCOG00000000211RBMS19573.011ENSPPAG00000036520-9273.011Pan_paniscus
ENSXCOG00000000211RBMS19575.000ENSPPRG00000005040RBMS19474.432Panthera_pardus
ENSXCOG00000000211RBMS19575.000ENSPTIG00000021240RBMS19474.432Panthera_tigris_altaica
ENSXCOG00000000211RBMS19575.852ENSPTRG00000052304RBMS19275.852Pan_troglodytes
ENSXCOG00000000211RBMS19573.580ENSPTRG00000039358-9969.275Pan_troglodytes
ENSXCOG00000000211RBMS19575.852ENSPANG00000001383RBMS19275.852Papio_anubis
ENSXCOG00000000211RBMS19576.571ENSPKIG00000012818rbms1a8976.791Paramormyrops_kingsleyae
ENSXCOG00000000211RBMS110077.628ENSPKIG00000001498rbms1a8877.143Paramormyrops_kingsleyae
ENSXCOG00000000211RBMS19577.273ENSPSIG00000010240RBMS18777.273Pelodiscus_sinensis
ENSXCOG00000000211RBMS19763.231ENSPMGG00000004341rbms1a9063.663Periophthalmus_magnuspinnatus
ENSXCOG00000000211RBMS19377.746ENSPMGG00000006310RBMS19674.785Periophthalmus_magnuspinnatus
ENSXCOG00000000211RBMS19575.284ENSPEMG00000009449Rbms18975.284Peromyscus_maniculatus_bairdii
ENSXCOG00000000211RBMS19576.989ENSPCIG00000018405RBMS18776.989Phascolarctos_cinereus
ENSXCOG00000000211RBMS110097.820ENSPFOG00000017483RBMS19397.820Poecilia_formosa
ENSXCOG00000000211RBMS19368.605ENSPFOG00000016116rbms1a8968.605Poecilia_formosa
ENSXCOG00000000211RBMS19368.605ENSPLAG00000013864rbms1a8968.605Poecilia_latipinna
ENSXCOG00000000211RBMS110098.361ENSPLAG00000000920RBMS19398.361Poecilia_latipinna
ENSXCOG00000000211RBMS110097.820ENSPMEG00000015838RBMS19397.820Poecilia_mexicana
ENSXCOG00000000211RBMS19368.605ENSPMEG00000016185rbms1a8968.605Poecilia_mexicana
ENSXCOG00000000211RBMS19368.605ENSPREG00000020161rbms1a8968.605Poecilia_reticulata
ENSXCOG00000000211RBMS110098.093ENSPREG00000008146RBMS19398.093Poecilia_reticulata
ENSXCOG00000000211RBMS19572.283ENSPPYG00000012879-8772.283Pongo_abelii
ENSXCOG00000000211RBMS19569.886ENSPCAG00000009673RBMS18769.886Procavia_capensis
ENSXCOG00000000211RBMS19575.000ENSPCOG00000027294RBMS19474.432Propithecus_coquereli
ENSXCOG00000000211RBMS19564.773ENSPVAG00000010429RBMS18764.773Pteropus_vampyrus
ENSXCOG00000000211RBMS19586.782ENSPNYG00000002643RBMS18986.533Pundamilia_nyererei
ENSXCOG00000000211RBMS19574.713ENSPNAG00000010225rbms1a8874.713Pygocentrus_nattereri
ENSXCOG00000000211RBMS110079.459ENSPNAG00000023479RBMS18881.375Pygocentrus_nattereri
ENSXCOG00000000211RBMS19574.148ENSRNOG00000008482Rbms19170.924Rattus_norvegicus
ENSXCOG00000000211RBMS19575.568ENSRBIG00000044262RBMS19275.354Rhinopithecus_bieti
ENSXCOG00000000211RBMS19575.852ENSRROG00000043108RBMS19275.852Rhinopithecus_roxellana
ENSXCOG00000000211RBMS19575.852ENSSBOG00000034705RBMS19475.852Saimiri_boliviensis_boliviensis
ENSXCOG00000000211RBMS19576.705ENSSHAG00000012271RBMS110071.884Sarcophilus_harrisii
ENSXCOG00000000211RBMS19579.656ENSSFOG00015022929rbms18879.656Scleropages_formosus
ENSXCOG00000000211RBMS19575.575ENSSFOG00015014493rbms1a9575.358Scleropages_formosus
ENSXCOG00000000211RBMS19368.314ENSSMAG00000012722rbms1a9568.314Scophthalmus_maximus
ENSXCOG00000000211RBMS19585.673ENSSMAG00000012152RBMS18886.503Scophthalmus_maximus
ENSXCOG00000000211RBMS19369.186ENSSDUG00000020602rbms1a9569.186Seriola_dumerili
ENSXCOG00000000211RBMS19586.819ENSSDUG00000018803RBMS18986.819Seriola_dumerili
ENSXCOG00000000211RBMS19586.533ENSSLDG00000016556RBMS18886.533Seriola_lalandi_dorsalis
ENSXCOG00000000211RBMS19369.186ENSSLDG00000009495rbms1a8969.186Seriola_lalandi_dorsalis
ENSXCOG00000000211RBMS18157.333ENSSARG00000011085RBMS17457.333Sorex_araneus
ENSXCOG00000000211RBMS19577.841ENSSPUG00000017163RBMS19477.841Sphenodon_punctatus
ENSXCOG00000000211RBMS19369.477ENSSPAG00000005371rbms1a8969.477Stegastes_partitus
ENSXCOG00000000211RBMS19587.966ENSSPAG00000000059RBMS18887.966Stegastes_partitus
ENSXCOG00000000211RBMS19575.000ENSSSCG00000015888RBMS18775.000Sus_scrofa
ENSXCOG00000000211RBMS19576.989ENSTGUG00000006606RBMS18776.989Taeniopygia_guttata
ENSXCOG00000000211RBMS19582.857ENSTRUG00000005466-8883.095Takifugu_rubripes
ENSXCOG00000000211RBMS19367.251ENSTRUG00000017155rbms1a8967.151Takifugu_rubripes
ENSXCOG00000000211RBMS19664.589ENSTNIG00000009477rbms1a9864.577Tetraodon_nigroviridis
ENSXCOG00000000211RBMS110082.337ENSTNIG00000016496RBMS19784.770Tetraodon_nigroviridis
ENSXCOG00000000211RBMS19567.898ENSTBEG00000016156RBMS19267.898Tupaia_belangeri
ENSXCOG00000000211RBMS19575.000ENSTTRG00000011058RBMS19275.000Tursiops_truncatus
ENSXCOG00000000211RBMS19575.000ENSUAMG00000022331RBMS18775.000Ursus_americanus
ENSXCOG00000000211RBMS19575.000ENSUMAG00000008605RBMS19075.000Ursus_maritimus
ENSXCOG00000000211RBMS18877.982ENSVPAG00000002716RBMS18677.982Vicugna_pacos
ENSXCOG00000000211RBMS19574.716ENSVVUG00000018682RBMS19474.716Vulpes_vulpes
ENSXCOG00000000211RBMS110069.786ENSXETG00000016204rbms19570.704Xenopus_tropicalis
ENSXCOG00000000211RBMS110098.638ENSXMAG00000011405RBMS19398.638Xiphophorus_maculatus
ENSXCOG00000000211RBMS19368.605ENSXMAG00000001802rbms1a8968.605Xiphophorus_maculatus

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