EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000000245 (Gene tree)
Gene ID: -
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1 (yeast)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2759 bases
Position: chrKQ557221.1:29013738-29016496
Accession: ZDB-GENE-040426-1927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000312	RIO1	PF01163.22	2.9e-73	1	1
ENSXCOP00000000301	RIO1	PF01163.22	7.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000308	-	1290	-	ENSXCOP00000000301	429 (aa)	-	-
ENSXCOT00000000319	-	1251	-	ENSXCOP00000000312	416 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000000245	riok1	71	42.053	ENSXCOG00000001032	riok3	61	42.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000245	riok1	100	66.597	ENSG00000124784	RIOK1	84	65.126	Homo_sapiens
ENSXCOG00000000245	riok1	71	73.616	ENSAPOG00000015632	riok1	99	73.616	Acanthochromis_polyacanthus
ENSXCOG00000000245	riok1	100	67.227	ENSAMEG00000017367	RIOK1	84	65.336	Ailuropoda_melanoleuca
ENSXCOG00000000245	riok1	100	73.276	ENSACIG00000003735	riok1	85	73.970	Amphilophus_citrinellus
ENSXCOG00000000245	riok1	100	75.435	ENSAOCG00000011818	riok1	86	75.435	Amphiprion_ocellaris
ENSXCOG00000000245	riok1	100	75.217	ENSAPEG00000001345	riok1	86	75.217	Amphiprion_percula
ENSXCOG00000000245	riok1	99	71.429	ENSATEG00000006594	riok1	99	72.707	Anabas_testudineus
ENSXCOG00000000245	riok1	100	66.807	ENSAPLG00000004196	RIOK1	100	66.949	Anas_platyrhynchos
ENSXCOG00000000245	riok1	99	66.026	ENSACAG00000000695	RIOK1	83	65.385	Anolis_carolinensis
ENSXCOG00000000245	riok1	100	56.842	ENSANAG00000023777	RIOK1	83	56.211	Aotus_nancymaae
ENSXCOG00000000245	riok1	100	75.705	ENSACLG00000015799	riok1	86	75.488	Astatotilapia_calliptera
ENSXCOG00000000245	riok1	100	67.377	ENSAMXG00000015286	riok1	81	67.591	Astyanax_mexicanus
ENSXCOG00000000245	riok1	100	67.017	ENSBTAG00000013821	RIOK1	84	65.336	Bos_taurus
ENSXCOG00000000245	riok1	90	49.512	WBGene00019698	riok-1	50	63.386	Caenorhabditis_elegans
ENSXCOG00000000245	riok1	100	66.176	ENSCJAG00000042960	RIOK1	84	64.916	Callithrix_jacchus
ENSXCOG00000000245	riok1	100	66.807	ENSCAFG00000009563	RIOK1	84	65.546	Canis_familiaris
ENSXCOG00000000245	riok1	90	67.143	ENSCAFG00020013233	RIOK1	71	70.051	Canis_lupus_dingo
ENSXCOG00000000245	riok1	100	66.597	ENSCHIG00000001534	RIOK1	84	65.336	Capra_hircus
ENSXCOG00000000245	riok1	83	65.517	ENSTSYG00000011368	RIOK1	100	62.997	Carlito_syrichta
ENSXCOG00000000245	riok1	94	65.479	ENSCAPG00000008489	RIOK1	99	64.579	Cavia_aperea
ENSXCOG00000000245	riok1	97	66.017	ENSCPOG00000009882	RIOK1	84	65.336	Cavia_porcellus
ENSXCOG00000000245	riok1	100	65.966	ENSCCAG00000024061	RIOK1	84	64.706	Cebus_capucinus
ENSXCOG00000000245	riok1	100	69.655	ENSCATG00000001548	RIOK1	81	68.910	Cercocebus_atys
ENSXCOG00000000245	riok1	100	65.336	ENSCLAG00000003522	RIOK1	84	64.286	Chinchilla_lanigera
ENSXCOG00000000245	riok1	90	67.143	ENSCSAG00000007396	RIOK1	73	69.289	Chlorocebus_sabaeus
ENSXCOG00000000245	riok1	77	76.440	ENSCHOG00000001873	RIOK1	64	80.000	Choloepus_hoffmanni
ENSXCOG00000000245	riok1	85	70.202	ENSCPBG00000008685	RIOK1	68	70.305	Chrysemys_picta_bellii
ENSXCOG00000000245	riok1	100	69.425	ENSCANG00000032919	RIOK1	81	68.677	Colobus_angolensis_palliatus
ENSXCOG00000000245	riok1	100	64.108	ENSCGRG00001018868	Riok1	85	62.708	Cricetulus_griseus_chok1gshd
ENSXCOG00000000245	riok1	100	64.108	ENSCGRG00000008015	Riok1	85	62.708	Cricetulus_griseus_crigri
ENSXCOG00000000245	riok1	99	54.265	ENSCSEG00000015014	riok1	81	54.118	Cynoglossus_semilaevis
ENSXCOG00000000245	riok1	71	72.204	ENSCVAG00000011291	riok1	99	71.613	Cyprinodon_variegatus
ENSXCOG00000000245	riok1	100	67.742	ENSDARG00000016399	riok1	84	67.026	Danio_rerio
ENSXCOG00000000245	riok1	100	66.527	ENSDNOG00000015813	RIOK1	83	65.063	Dasypus_novemcinctus
ENSXCOG00000000245	riok1	100	65.756	ENSDORG00000008530	Riok1	84	64.706	Dipodomys_ordii
ENSXCOG00000000245	riok1	98	51.702	FBgn0036187	RIOK1	79	50.212	Drosophila_melanogaster
ENSXCOG00000000245	riok1	100	65.126	ENSETEG00000020273	RIOK1	85	64.076	Echinops_telfairi
ENSXCOG00000000245	riok1	99	61.752	ENSEBUG00000013672	riok1	83	61.752	Eptatretus_burgeri
ENSXCOG00000000245	riok1	90	67.143	ENSEASG00005012032	RIOK1	69	69.797	Equus_asinus_asinus
ENSXCOG00000000245	riok1	100	66.597	ENSECAG00000009007	RIOK1	84	65.336	Equus_caballus
ENSXCOG00000000245	riok1	90	60.238	ENSEEUG00000007123	RIOK1	90	62.437	Erinaceus_europaeus
ENSXCOG00000000245	riok1	100	67.819	ENSELUG00000017029	riok1	84	68.467	Esox_lucius
ENSXCOG00000000245	riok1	99	65.208	ENSFCAG00000027290	RIOK1	84	63.958	Felis_catus
ENSXCOG00000000245	riok1	100	66.667	ENSFALG00000013244	RIOK1	84	66.667	Ficedula_albicollis
ENSXCOG00000000245	riok1	100	64.916	ENSFDAG00000019139	RIOK1	84	63.866	Fukomys_damarensis
ENSXCOG00000000245	riok1	78	87.730	ENSFHEG00000021419	riok1	82	80.323	Fundulus_heteroclitus
ENSXCOG00000000245	riok1	81	75.429	ENSGMOG00000018668	riok1	88	75.429	Gadus_morhua
ENSXCOG00000000245	riok1	71	62.154	ENSGALG00000012795	RIOK1	100	62.500	Gallus_gallus
ENSXCOG00000000245	riok1	100	89.499	ENSGAFG00000004091	riok1	78	89.737	Gambusia_affinis
ENSXCOG00000000245	riok1	97	73.571	ENSGACG00000002496	riok1	91	74.565	Gasterosteus_aculeatus
ENSXCOG00000000245	riok1	84	71.094	ENSGAGG00000002262	RIOK1	85	71.094	Gopherus_agassizii
ENSXCOG00000000245	riok1	100	66.207	ENSGGOG00000011037	RIOK1	82	71.383	Gorilla_gorilla
ENSXCOG00000000245	riok1	52	69.778	ENSHBUG00000005586	riok1	63	70.183	Haplochromis_burtoni
ENSXCOG00000000245	riok1	100	65.254	ENSHGLG00000008699	RIOK1	84	64.195	Heterocephalus_glaber_female
ENSXCOG00000000245	riok1	100	65.254	ENSHGLG00100008188	RIOK1	84	64.195	Heterocephalus_glaber_male
ENSXCOG00000000245	riok1	100	71.154	ENSHCOG00000013275	riok1	88	71.154	Hippocampus_comes
ENSXCOG00000000245	riok1	100	67.447	ENSIPUG00000003290	riok1	83	67.234	Ictalurus_punctatus
ENSXCOG00000000245	riok1	100	65.546	ENSSTOG00000009289	RIOK1	84	65.336	Ictidomys_tridecemlineatus
ENSXCOG00000000245	riok1	100	67.019	ENSJJAG00000015152	Riok1	84	65.539	Jaculus_jaculus
ENSXCOG00000000245	riok1	83	78.068	ENSKMAG00000019378	riok1	100	78.068	Kryptolebias_marmoratus
ENSXCOG00000000245	riok1	100	73.605	ENSLBEG00000016650	riok1	84	74.893	Labrus_bergylta
ENSXCOG00000000245	riok1	100	61.064	ENSLACG00000000300	RIOK1	83	60.213	Latimeria_chalumnae
ENSXCOG00000000245	riok1	100	67.234	ENSLOCG00000011728	riok1	84	67.447	Lepisosteus_oculatus
ENSXCOG00000000245	riok1	100	66.807	ENSLAFG00000005504	RIOK1	85	65.546	Loxodonta_africana
ENSXCOG00000000245	riok1	100	69.655	ENSMFAG00000029990	RIOK1	81	68.910	Macaca_fascicularis
ENSXCOG00000000245	riok1	100	69.425	ENSMMUG00000015577	RIOK1	81	68.677	Macaca_mulatta
ENSXCOG00000000245	riok1	100	66.898	ENSMNEG00000034396	RIOK1	79	68.280	Macaca_nemestrina
ENSXCOG00000000245	riok1	100	69.655	ENSMLEG00000026327	RIOK1	81	68.910	Mandrillus_leucophaeus
ENSXCOG00000000245	riok1	99	73.707	ENSMAMG00000019557	riok1	85	75.000	Mastacembelus_armatus
ENSXCOG00000000245	riok1	100	75.705	ENSMZEG00005019482	riok1	85	75.488	Maylandia_zebra
ENSXCOG00000000245	riok1	100	67.585	ENSMGAG00000003816	RIOK1	84	67.161	Meleagris_gallopavo
ENSXCOG00000000245	riok1	100	64.842	ENSMAUG00000012751	Riok1	84	63.579	Mesocricetus_auratus
ENSXCOG00000000245	riok1	100	66.176	ENSMICG00000044301	RIOK1	71	64.916	Microcebus_murinus
ENSXCOG00000000245	riok1	100	64.000	ENSMOCG00000017032	Riok1	84	63.789	Microtus_ochrogaster
ENSXCOG00000000245	riok1	100	64.898	ENSMMOG00000020598	riok1	87	64.969	Mola_mola
ENSXCOG00000000245	riok1	100	65.539	ENSMODG00000009964	RIOK1	83	65.539	Monodelphis_domestica
ENSXCOG00000000245	riok1	100	67.411	ENSMALG00000019982	riok1	89	67.411	Monopterus_albus
ENSXCOG00000000245	riok1	100	64.644	MGP_CAROLIEiJ_G0018439	Riok1	84	63.235	Mus_caroli
ENSXCOG00000000245	riok1	100	64.916	ENSMUSG00000021428	Riok1	85	71.023	Mus_musculus
ENSXCOG00000000245	riok1	100	64.706	MGP_PahariEiJ_G0019507	Riok1	84	63.235	Mus_pahari
ENSXCOG00000000245	riok1	100	64.706	MGP_SPRETEiJ_G0019319	Riok1	84	63.235	Mus_spretus
ENSXCOG00000000245	riok1	100	66.946	ENSMPUG00000000570	RIOK1	84	64.916	Mustela_putorius_furo
ENSXCOG00000000245	riok1	100	66.876	ENSMLUG00000015312	RIOK1	84	65.618	Myotis_lucifugus
ENSXCOG00000000245	riok1	100	65.966	ENSNGAG00000021734	Riok1	84	64.916	Nannospalax_galili
ENSXCOG00000000245	riok1	85	76.515	ENSNBRG00000017489	riok1	75	76.590	Neolamprologus_brichardi
ENSXCOG00000000245	riok1	100	61.239	ENSNLEG00000011621	RIOK1	81	61.239	Nomascus_leucogenys
ENSXCOG00000000245	riok1	92	55.782	ENSMEUG00000006679	-	72	54.072	Notamacropus_eugenii
ENSXCOG00000000245	riok1	77	68.339	ENSOPRG00000009524	RIOK1	100	61.456	Ochotona_princeps
ENSXCOG00000000245	riok1	71	66.216	ENSODEG00000005663	RIOK1	71	66.216	Octodon_degus
ENSXCOG00000000245	riok1	100	74.464	ENSONIG00000014010	riok1	84	75.107	Oreochromis_niloticus
ENSXCOG00000000245	riok1	99	64.454	ENSOANG00000012553	RIOK1	99	66.307	Ornithorhynchus_anatinus
ENSXCOG00000000245	riok1	100	64.706	ENSOCUG00000011824	RIOK1	84	64.916	Oryctolagus_cuniculus
ENSXCOG00000000245	riok1	100	75.271	ENSORLG00000008221	riok1	85	74.620	Oryzias_latipes
ENSXCOG00000000245	riok1	99	76.235	ENSORLG00020013838	riok1	58	76.235	Oryzias_latipes_hni
ENSXCOG00000000245	riok1	100	75.054	ENSORLG00015009817	riok1	85	75.054	Oryzias_latipes_hsok
ENSXCOG00000000245	riok1	100	75.758	ENSOMEG00000002758	riok1	77	75.758	Oryzias_melastigma
ENSXCOG00000000245	riok1	99	62.174	ENSOGAG00000010192	RIOK1	83	61.456	Otolemur_garnettii
ENSXCOG00000000245	riok1	100	67.017	ENSOARG00000017747	RIOK1	84	65.546	Ovis_aries
ENSXCOG00000000245	riok1	100	60.381	ENSPPAG00000016349	RIOK1	100	59.561	Pan_paniscus
ENSXCOG00000000245	riok1	100	65.546	ENSPPRG00000001932	RIOK1	83	64.286	Panthera_pardus
ENSXCOG00000000245	riok1	100	65.546	ENSPTIG00000018545	RIOK1	83	64.286	Panthera_tigris_altaica
ENSXCOG00000000245	riok1	100	66.176	ENSPTRG00000017700	RIOK1	84	64.916	Pan_troglodytes
ENSXCOG00000000245	riok1	100	69.655	ENSPANG00000016522	RIOK1	81	68.910	Papio_anubis
ENSXCOG00000000245	riok1	100	68.590	ENSPKIG00000006442	riok1	85	68.162	Paramormyrops_kingsleyae
ENSXCOG00000000245	riok1	100	68.000	ENSPSIG00000006488	RIOK1	83	66.737	Pelodiscus_sinensis
ENSXCOG00000000245	riok1	84	76.438	ENSPMGG00000017807	riok1	92	72.754	Periophthalmus_magnuspinnatus
ENSXCOG00000000245	riok1	100	64.706	ENSPEMG00000017844	Riok1	84	63.445	Peromyscus_maniculatus_bairdii
ENSXCOG00000000245	riok1	73	74.754	ENSPMAG00000006351	riok1	73	74.754	Petromyzon_marinus
ENSXCOG00000000245	riok1	90	65.550	ENSPCIG00000012653	RIOK1	70	68.274	Phascolarctos_cinereus
ENSXCOG00000000245	riok1	100	91.048	ENSPFOG00000011532	riok1	86	91.048	Poecilia_formosa
ENSXCOG00000000245	riok1	100	90.830	ENSPLAG00000001341	riok1	86	90.830	Poecilia_latipinna
ENSXCOG00000000245	riok1	100	91.485	ENSPMEG00000007710	riok1	88	91.485	Poecilia_mexicana
ENSXCOG00000000245	riok1	100	91.247	ENSPREG00000009237	riok1	87	91.247	Poecilia_reticulata
ENSXCOG00000000245	riok1	100	65.966	ENSPPYG00000016207	RIOK1	84	64.916	Pongo_abelii
ENSXCOG00000000245	riok1	100	57.773	ENSPCAG00000007892	RIOK1	85	56.723	Procavia_capensis
ENSXCOG00000000245	riok1	100	66.387	ENSPVAG00000014091	RIOK1	83	65.546	Pteropus_vampyrus
ENSXCOG00000000245	riok1	71	75.399	ENSPNYG00000004465	riok1	100	76.038	Pundamilia_nyererei
ENSXCOG00000000245	riok1	100	68.590	ENSPNAG00000015435	riok1	83	67.521	Pygocentrus_nattereri
ENSXCOG00000000245	riok1	100	63.655	ENSRNOG00000014049	Riok1	99	63.067	Rattus_norvegicus
ENSXCOG00000000245	riok1	100	69.425	ENSRBIG00000036685	RIOK1	81	68.677	Rhinopithecus_bieti
ENSXCOG00000000245	riok1	100	69.425	ENSRROG00000036611	RIOK1	81	68.677	Rhinopithecus_roxellana
ENSXCOG00000000245	riok1	74	38.227	YOR119C	RIO1	98	35.639	Saccharomyces_cerevisiae
ENSXCOG00000000245	riok1	100	70.413	ENSSBOG00000012588	RIOK1	81	69.676	Saimiri_boliviensis_boliviensis
ENSXCOG00000000245	riok1	84	68.112	ENSSHAG00000003091	RIOK1	76	68.112	Sarcophilus_harrisii
ENSXCOG00000000245	riok1	100	67.377	ENSSFOG00015001035	riok1	85	67.377	Scleropages_formosus
ENSXCOG00000000245	riok1	71	70.382	ENSSDUG00000007291	riok1	100	69.427	Seriola_dumerili
ENSXCOG00000000245	riok1	100	75.325	ENSSLDG00000017657	riok1	85	74.675	Seriola_lalandi_dorsalis
ENSXCOG00000000245	riok1	99	63.158	ENSSPUG00000007624	RIOK1	80	61.737	Sphenodon_punctatus
ENSXCOG00000000245	riok1	100	75.705	ENSSPAG00000022710	riok1	87	75.705	Stegastes_partitus
ENSXCOG00000000245	riok1	99	68.213	ENSSSCG00000001024	RIOK1	81	67.765	Sus_scrofa
ENSXCOG00000000245	riok1	100	67.227	ENSTGUG00000002331	RIOK1	84	66.105	Taeniopygia_guttata
ENSXCOG00000000245	riok1	64	63.251	ENSTRUG00000001575	-	99	63.571	Takifugu_rubripes
ENSXCOG00000000245	riok1	89	60.244	ENSTRUG00000002854	riok1	92	60.215	Takifugu_rubripes
ENSXCOG00000000245	riok1	100	66.385	ENSTNIG00000003078	riok1	85	66.808	Tetraodon_nigroviridis
ENSXCOG00000000245	riok1	100	63.235	ENSTBEG00000016730	RIOK1	84	62.185	Tupaia_belangeri
ENSXCOG00000000245	riok1	83	69.845	ENSTTRG00000017335	RIOK1	81	69.845	Tursiops_truncatus
ENSXCOG00000000245	riok1	90	67.290	ENSUAMG00000003721	RIOK1	71	70.051	Ursus_americanus
ENSXCOG00000000245	riok1	100	67.647	ENSUMAG00000018461	RIOK1	84	65.756	Ursus_maritimus
ENSXCOG00000000245	riok1	100	67.227	ENSVVUG00000005018	RIOK1	84	65.756	Vulpes_vulpes
ENSXCOG00000000245	riok1	97	69.213	ENSXETG00000020436	riok1	78	67.824	Xenopus_tropicalis
ENSXCOG00000000245	riok1	92	92.637	ENSXMAG00000014572	riok1	82	92.637	Xiphophorus_maculatus