EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000000265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6378 bases
Position: chrKQ557225.1:43421471-43427848
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000284	RVT_1	PF00078.27	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000291	-	1233	-	ENSXCOP00000000284	410 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000000265	-	91	99.462	ENSXCOG00000001942	-	98	99.462
ENSXCOG00000000265	-	91	98.925	ENSXCOG00000008303	-	98	98.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000265	-	91	69.600	ENSAPOG00000023378	-	91	69.600	Acanthochromis_polyacanthus
ENSXCOG00000000265	-	90	68.392	ENSACIG00000009711	-	99	68.392	Amphilophus_citrinellus
ENSXCOG00000000265	-	51	79.524	ENSAPEG00000022145	-	64	79.524	Amphiprion_percula
ENSXCOG00000000265	-	90	67.647	ENSSMAG00000001572	-	93	67.647	Scophthalmus_maximus
ENSXCOG00000000265	-	73	78.298	ENSSPAG00000022162	-	92	78.298	Stegastes_partitus
ENSXCOG00000000265	-	83	96.471	ENSXMAG00000024880	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.176	ENSXMAG00000027748	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000000265	-	80	96.667	ENSXMAG00000022383	-	78	96.667	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	95.882	ENSXMAG00000021792	-	79	95.882	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	95.882	ENSXMAG00000022668	-	79	95.882	Xiphophorus_maculatus
ENSXCOG00000000265	-	54	81.498	ENSXMAG00000024987	-	64	81.498	Xiphophorus_maculatus
ENSXCOG00000000265	-	80	96.970	ENSXMAG00000029394	-	78	96.970	Xiphophorus_maculatus
ENSXCOG00000000265	-	80	96.364	ENSXMAG00000024488	-	78	96.364	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.176	ENSXMAG00000023260	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	95.882	ENSXMAG00000023593	-	79	95.882	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.471	ENSXMAG00000027368	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000000265	-	97	92.443	ENSXMAG00000025367	-	94	92.443	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.471	ENSXMAG00000022344	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	95.882	ENSXMAG00000026114	-	79	95.882	Xiphophorus_maculatus
ENSXCOG00000000265	-	90	97.035	ENSXMAG00000023963	-	94	97.035	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.471	ENSXMAG00000021499	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	96.176	ENSXMAG00000029702	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000000265	-	83	95.882	ENSXMAG00000029755	-	79	95.882	Xiphophorus_maculatus