EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000407 (Gene tree)
Gene ID: -
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9171 bases
Position: chrKQ557213.1:28363529-28372699
Accession: ZDB-GENE-060519-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000483	Exo_endo_phos	PF03372.23	7e-17	1	1
ENSXCOP00000000487	Exo_endo_phos	PF03372.23	8.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000491	-	1719	-	ENSXCOP00000000483	572 (aa)	-	-
ENSXCOT00000000495	-	1758	-	ENSXCOP00000000487	585 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000407	pde12	97	57.265	ENSG00000174840	PDE12	95	57.414	Homo_sapiens
ENSXCOG00000000407	pde12	99	80.484	ENSAPOG00000018806	pde12	97	80.484	Acanthochromis_polyacanthus
ENSXCOG00000000407	pde12	97	57.867	ENSAMEG00000011802	PDE12	99	57.867	Ailuropoda_melanoleuca
ENSXCOG00000000407	pde12	98	77.778	ENSACIG00000014918	pde12	95	77.778	Amphilophus_citrinellus
ENSXCOG00000000407	pde12	99	81.436	ENSAOCG00000016376	pde12	97	81.436	Amphiprion_ocellaris
ENSXCOG00000000407	pde12	99	81.261	ENSAPEG00000000756	pde12	97	81.261	Amphiprion_percula
ENSXCOG00000000407	pde12	99	78.634	ENSATEG00000003072	pde12	99	79.249	Anabas_testudineus
ENSXCOG00000000407	pde12	97	54.482	ENSACAG00000003067	PDE12	97	53.754	Anolis_carolinensis
ENSXCOG00000000407	pde12	97	57.290	ENSANAG00000011815	PDE12	95	57.439	Aotus_nancymaae
ENSXCOG00000000407	pde12	98	78.230	ENSACLG00000010127	pde12	98	75.972	Astatotilapia_calliptera
ENSXCOG00000000407	pde12	98	63.778	ENSAMXG00000020765	pde12	99	62.791	Astyanax_mexicanus
ENSXCOG00000000407	pde12	97	57.315	ENSBTAG00000015563	PDE12	95	57.659	Bos_taurus
ENSXCOG00000000407	pde12	97	58.204	ENSCJAG00000019905	PDE12	95	58.204	Callithrix_jacchus
ENSXCOG00000000407	pde12	97	56.799	ENSCAFG00000007792	PDE12	94	56.678	Canis_familiaris
ENSXCOG00000000407	pde12	97	56.799	ENSCAFG00020006692	PDE12	94	56.678	Canis_lupus_dingo
ENSXCOG00000000407	pde12	97	57.653	ENSCHIG00000014202	PDE12	95	57.633	Capra_hircus
ENSXCOG00000000407	pde12	97	56.873	ENSTSYG00000025750	PDE12	95	56.947	Carlito_syrichta
ENSXCOG00000000407	pde12	97	57.414	ENSCPOG00000001620	PDE12	95	57.414	Cavia_porcellus
ENSXCOG00000000407	pde12	87	63.158	ENSCCAG00000031290	PDE12	94	63.158	Cebus_capucinus
ENSXCOG00000000407	pde12	97	57.265	ENSCATG00000044539	PDE12	95	57.586	Cercocebus_atys
ENSXCOG00000000407	pde12	97	55.363	ENSCLAG00000004864	PDE12	95	56.034	Chinchilla_lanigera
ENSXCOG00000000407	pde12	97	57.192	ENSCSAG00000012275	PDE12	95	57.340	Chlorocebus_sabaeus
ENSXCOG00000000407	pde12	68	64.948	ENSCHOG00000012173	-	98	62.808	Choloepus_hoffmanni
ENSXCOG00000000407	pde12	86	65.395	ENSCHOG00000002188	-	83	65.217	Choloepus_hoffmanni
ENSXCOG00000000407	pde12	97	57.420	ENSCPBG00000012353	PDE12	91	57.420	Chrysemys_picta_bellii
ENSXCOG00000000407	pde12	95	36.738	ENSCING00000006903	-	99	38.526	Ciona_intestinalis
ENSXCOG00000000407	pde12	97	57.436	ENSCANG00000038723	PDE12	95	57.759	Colobus_angolensis_palliatus
ENSXCOG00000000407	pde12	97	56.672	ENSCGRG00001021836	Pde12	95	56.574	Cricetulus_griseus_chok1gshd
ENSXCOG00000000407	pde12	97	56.696	ENSCGRG00000012319	Pde12	95	56.597	Cricetulus_griseus_crigri
ENSXCOG00000000407	pde12	97	74.506	ENSCSEG00000018538	pde12	99	74.506	Cynoglossus_semilaevis
ENSXCOG00000000407	pde12	98	69.643	ENSCVAG00000003624	pde12	94	69.643	Cyprinodon_variegatus
ENSXCOG00000000407	pde12	97	62.230	ENSDARG00000030964	pde12	93	62.050	Danio_rerio
ENSXCOG00000000407	pde12	97	56.949	ENSDNOG00000048413	PDE12	95	57.265	Dasypus_novemcinctus
ENSXCOG00000000407	pde12	97	57.439	ENSDORG00000004313	Pde12	99	55.172	Dipodomys_ordii
ENSXCOG00000000407	pde12	96	34.087	FBgn0051759	CG31759	81	36.617	Drosophila_melanogaster
ENSXCOG00000000407	pde12	80	44.322	ENSEBUG00000004803	pde12	71	47.881	Eptatretus_burgeri
ENSXCOG00000000407	pde12	97	57.586	ENSEASG00005000644	PDE12	95	57.759	Equus_asinus_asinus
ENSXCOG00000000407	pde12	97	57.759	ENSECAG00000005326	PDE12	95	57.931	Equus_caballus
ENSXCOG00000000407	pde12	58	63.006	ENSEEUG00000010406	-	57	62.644	Erinaceus_europaeus
ENSXCOG00000000407	pde12	98	66.132	ENSELUG00000014391	pde12	93	66.132	Esox_lucius
ENSXCOG00000000407	pde12	99	55.229	ENSFCAG00000031696	PDE12	95	56.995	Felis_catus
ENSXCOG00000000407	pde12	83	60.251	ENSFALG00000008401	PDE12	99	60.587	Ficedula_albicollis
ENSXCOG00000000407	pde12	98	57.118	ENSFDAG00000021278	PDE12	95	57.118	Fukomys_damarensis
ENSXCOG00000000407	pde12	91	83.080	ENSFHEG00000018967	pde12	86	82.486	Fundulus_heteroclitus
ENSXCOG00000000407	pde12	97	64.337	ENSGMOG00000018041	pde12	99	64.452	Gadus_morhua
ENSXCOG00000000407	pde12	97	58.363	ENSGALG00000052355	PDE12	95	58.792	Gallus_gallus
ENSXCOG00000000407	pde12	98	93.023	ENSGAFG00000002045	pde12	95	93.023	Gambusia_affinis
ENSXCOG00000000407	pde12	99	75.087	ENSGACG00000003914	pde12	97	75.087	Gasterosteus_aculeatus
ENSXCOG00000000407	pde12	97	57.774	ENSGAGG00000010266	PDE12	92	57.774	Gopherus_agassizii
ENSXCOG00000000407	pde12	97	57.265	ENSGGOG00000003312	PDE12	95	57.414	Gorilla_gorilla
ENSXCOG00000000407	pde12	98	78.761	ENSHBUG00000023370	pde12	95	78.761	Haplochromis_burtoni
ENSXCOG00000000407	pde12	98	57.118	ENSHGLG00000005661	PDE12	95	57.118	Heterocephalus_glaber_female
ENSXCOG00000000407	pde12	98	57.118	ENSHGLG00100001136	PDE12	95	57.118	Heterocephalus_glaber_male
ENSXCOG00000000407	pde12	99	70.377	ENSHCOG00000013749	pde12	97	70.377	Hippocampus_comes
ENSXCOG00000000407	pde12	98	63.036	ENSIPUG00000007123	Pde12	98	61.446	Ictalurus_punctatus
ENSXCOG00000000407	pde12	97	57.414	ENSSTOG00000007861	PDE12	95	57.759	Ictidomys_tridecemlineatus
ENSXCOG00000000407	pde12	97	55.973	ENSJJAG00000006038	Pde12	94	56.507	Jaculus_jaculus
ENSXCOG00000000407	pde12	99	78.223	ENSKMAG00000018523	pde12	99	78.223	Kryptolebias_marmoratus
ENSXCOG00000000407	pde12	97	73.274	ENSLBEG00000026775	pde12	97	72.260	Labrus_bergylta
ENSXCOG00000000407	pde12	97	78.153	ENSLBEG00000009762	PDE12	94	78.330	Labrus_bergylta
ENSXCOG00000000407	pde12	99	62.478	ENSLACG00000015492	PDE12	95	62.478	Latimeria_chalumnae
ENSXCOG00000000407	pde12	98	64.464	ENSLOCG00000013277	pde12	94	63.879	Lepisosteus_oculatus
ENSXCOG00000000407	pde12	94	56.667	ENSLAFG00000002821	PDE12	100	56.537	Loxodonta_africana
ENSXCOG00000000407	pde12	97	57.265	ENSMFAG00000030966	PDE12	95	57.586	Macaca_fascicularis
ENSXCOG00000000407	pde12	97	57.265	ENSMMUG00000004052	PDE12	95	57.586	Macaca_mulatta
ENSXCOG00000000407	pde12	97	57.265	ENSMNEG00000030068	PDE12	95	57.586	Macaca_nemestrina
ENSXCOG00000000407	pde12	97	57.265	ENSMLEG00000036137	PDE12	95	57.586	Mandrillus_leucophaeus
ENSXCOG00000000407	pde12	98	79.715	ENSMAMG00000014415	pde12	95	79.715	Mastacembelus_armatus
ENSXCOG00000000407	pde12	98	78.761	ENSMZEG00005016132	pde12	98	76.502	Maylandia_zebra
ENSXCOG00000000407	pde12	98	76.554	ENSMZEG00005028202	-	99	76.554	Maylandia_zebra
ENSXCOG00000000407	pde12	56	66.875	ENSMGAG00000006449	PDE12	99	66.667	Meleagris_gallopavo
ENSXCOG00000000407	pde12	97	56.338	ENSMAUG00000000442	Pde12	95	55.458	Mesocricetus_auratus
ENSXCOG00000000407	pde12	97	57.560	ENSMICG00000005723	PDE12	95	56.724	Microcebus_murinus
ENSXCOG00000000407	pde12	97	57.618	ENSMOCG00000020734	Pde12	95	57.443	Microtus_ochrogaster
ENSXCOG00000000407	pde12	98	76.157	ENSMMOG00000013636	pde12	95	76.157	Mola_mola
ENSXCOG00000000407	pde12	97	57.168	ENSMODG00000000155	PDE12	95	57.068	Monodelphis_domestica
ENSXCOG00000000407	pde12	98	77.061	ENSMALG00000022647	pde12	95	77.061	Monopterus_albus
ENSXCOG00000000407	pde12	97	57.785	MGP_CAROLIEiJ_G0019032	Pde12	95	56.995	Mus_caroli
ENSXCOG00000000407	pde12	97	58.304	ENSMUSG00000043702	Pde12	95	57.513	Mus_musculus
ENSXCOG00000000407	pde12	97	57.958	MGP_PahariEiJ_G0030049	Pde12	95	57.513	Mus_pahari
ENSXCOG00000000407	pde12	97	58.304	MGP_SPRETEiJ_G0019916	Pde12	95	57.513	Mus_spretus
ENSXCOG00000000407	pde12	97	57.241	ENSMPUG00000016869	PDE12	95	57.241	Mustela_putorius_furo
ENSXCOG00000000407	pde12	97	56.747	ENSMLUG00000026487	PDE12	95	57.266	Myotis_lucifugus
ENSXCOG00000000407	pde12	97	57.491	ENSNGAG00000001228	Pde12	95	57.491	Nannospalax_galili
ENSXCOG00000000407	pde12	98	73.262	ENSNBRG00000015769	pde12	65	73.262	Neolamprologus_brichardi
ENSXCOG00000000407	pde12	97	57.436	ENSNLEG00000007269	-	95	57.241	Nomascus_leucogenys
ENSXCOG00000000407	pde12	97	54.167	ENSNLEG00000034833	-	95	54.466	Nomascus_leucogenys
ENSXCOG00000000407	pde12	96	56.577	ENSMEUG00000006786	PDE12	94	57.398	Notamacropus_eugenii
ENSXCOG00000000407	pde12	97	56.775	ENSOPRG00000015273	PDE12	95	57.461	Ochotona_princeps
ENSXCOG00000000407	pde12	96	57.391	ENSODEG00000006268	PDE12	95	57.414	Octodon_degus
ENSXCOG00000000407	pde12	97	78.853	ENSONIG00000004293	pde12	100	78.853	Oreochromis_niloticus
ENSXCOG00000000407	pde12	92	54.645	ENSOANG00000012885	PDE12	99	55.191	Ornithorhynchus_anatinus
ENSXCOG00000000407	pde12	96	57.465	ENSOCUG00000000823	PDE12	95	58.348	Oryctolagus_cuniculus
ENSXCOG00000000407	pde12	98	74.464	ENSORLG00000017444	pde12	95	74.107	Oryzias_latipes
ENSXCOG00000000407	pde12	98	74.107	ENSORLG00020010469	pde12	95	73.750	Oryzias_latipes_hni
ENSXCOG00000000407	pde12	98	74.464	ENSORLG00015004093	pde12	95	74.107	Oryzias_latipes_hsok
ENSXCOG00000000407	pde12	98	74.061	ENSOMEG00000020900	pde12	95	74.061	Oryzias_melastigma
ENSXCOG00000000407	pde12	97	57.607	ENSOGAG00000024093	PDE12	95	57.414	Otolemur_garnettii
ENSXCOG00000000407	pde12	93	57.500	ENSOARG00000013642	PDE12	100	57.374	Ovis_aries
ENSXCOG00000000407	pde12	97	57.094	ENSPPAG00000034712	PDE12	95	57.241	Pan_paniscus
ENSXCOG00000000407	pde12	99	55.229	ENSPPRG00000011738	PDE12	95	56.995	Panthera_pardus
ENSXCOG00000000407	pde12	86	58.121	ENSPTIG00000019166	PDE12	95	58.103	Panthera_tigris_altaica
ENSXCOG00000000407	pde12	97	57.094	ENSPTRG00000030221	PDE12	95	57.241	Pan_troglodytes
ENSXCOG00000000407	pde12	97	57.094	ENSPANG00000007324	PDE12	95	57.414	Papio_anubis
ENSXCOG00000000407	pde12	100	61.780	ENSPKIG00000025354	pde12	97	61.606	Paramormyrops_kingsleyae
ENSXCOG00000000407	pde12	97	58.481	ENSPSIG00000004926	PDE12	92	58.481	Pelodiscus_sinensis
ENSXCOG00000000407	pde12	100	66.143	ENSPMGG00000006742	pde12	99	66.143	Periophthalmus_magnuspinnatus
ENSXCOG00000000407	pde12	85	60.900	ENSPEMG00000007259	Pde12	88	61.483	Peromyscus_maniculatus_bairdii
ENSXCOG00000000407	pde12	98	93.486	ENSPFOG00000011864	pde12	95	93.486	Poecilia_formosa
ENSXCOG00000000407	pde12	76	94.444	ENSPLAG00000023871	pde12	80	94.444	Poecilia_latipinna
ENSXCOG00000000407	pde12	98	94.991	ENSPMEG00000005674	pde12	95	94.991	Poecilia_mexicana
ENSXCOG00000000407	pde12	98	93.939	ENSPREG00000022831	pde12	95	93.939	Poecilia_reticulata
ENSXCOG00000000407	pde12	98	56.973	ENSPPYG00000013769	PDE12	95	57.290	Pongo_abelii
ENSXCOG00000000407	pde12	97	56.873	ENSPCOG00000026004	PDE12	95	56.897	Propithecus_coquereli
ENSXCOG00000000407	pde12	97	57.292	ENSPVAG00000008885	PDE12	95	57.292	Pteropus_vampyrus
ENSXCOG00000000407	pde12	98	78.584	ENSPNYG00000013258	pde12	95	78.584	Pundamilia_nyererei
ENSXCOG00000000407	pde12	98	65.836	ENSPNAG00000029032	pde12	96	66.192	Pygocentrus_nattereri
ENSXCOG00000000407	pde12	97	58.131	ENSRNOG00000059442	Pde12	95	57.785	Rattus_norvegicus
ENSXCOG00000000407	pde12	97	57.265	ENSRBIG00000040704	PDE12	95	57.759	Rhinopithecus_bieti
ENSXCOG00000000407	pde12	97	57.265	ENSRROG00000031279	PDE12	95	57.759	Rhinopithecus_roxellana
ENSXCOG00000000407	pde12	96	57.168	ENSSBOG00000023974	PDE12	94	57.439	Saimiri_boliviensis_boliviensis
ENSXCOG00000000407	pde12	84	68.452	ENSSFOG00015003468	pde12	89	68.452	Scleropages_formosus
ENSXCOG00000000407	pde12	97	75.445	ENSSMAG00000003258	pde12	96	75.395	Scophthalmus_maximus
ENSXCOG00000000407	pde12	99	79.965	ENSSDUG00000020470	pde12	97	79.965	Seriola_dumerili
ENSXCOG00000000407	pde12	99	78.459	ENSSLDG00000019833	pde12	97	78.459	Seriola_lalandi_dorsalis
ENSXCOG00000000407	pde12	97	57.666	ENSSARG00000007201	PDE12	95	57.913	Sorex_araneus
ENSXCOG00000000407	pde12	98	78.470	ENSSPAG00000014980	pde12	95	78.470	Stegastes_partitus
ENSXCOG00000000407	pde12	97	57.414	ENSSSCG00000011465	-	95	57.759	Sus_scrofa
ENSXCOG00000000407	pde12	56	57.321	ENSSSCG00000034476	-	74	57.321	Sus_scrofa
ENSXCOG00000000407	pde12	65	64.960	ENSTGUG00000007290	PDE12	100	64.960	Taeniopygia_guttata
ENSXCOG00000000407	pde12	99	74.074	ENSTRUG00000005159	pde12	96	74.250	Takifugu_rubripes
ENSXCOG00000000407	pde12	97	72.500	ENSTNIG00000017497	pde12	95	72.500	Tetraodon_nigroviridis
ENSXCOG00000000407	pde12	77	65.798	ENSTBEG00000008202	PDE12	75	65.798	Tupaia_belangeri
ENSXCOG00000000407	pde12	97	57.949	ENSTTRG00000014707	PDE12	95	57.931	Tursiops_truncatus
ENSXCOG00000000407	pde12	73	49.302	ENSUAMG00000008368	-	93	49.535	Ursus_americanus
ENSXCOG00000000407	pde12	99	55.172	ENSUAMG00000020634	-	95	57.069	Ursus_americanus
ENSXCOG00000000407	pde12	75	61.048	ENSUMAG00000021906	PDE12	100	61.048	Ursus_maritimus
ENSXCOG00000000407	pde12	97	56.995	ENSVVUG00000020335	PDE12	93	56.873	Vulpes_vulpes
ENSXCOG00000000407	pde12	97	49.820	ENSXETG00000008653	pde12	97	50.000	Xenopus_tropicalis
ENSXCOG00000000407	pde12	98	98.927	ENSXMAG00000013370	pde12	95	98.927	Xiphophorus_maculatus