EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000530 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6428 bases
Position: chrKQ557223.1:23849930-23856357
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000606	YTH	PF04146.15	5.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000616	-	1155	-	ENSXCOP00000000606	384 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000530	ythdc1	79	52.692	ENSG00000083896	YTHDC1	50	52.574	Homo_sapiens
ENSXCOG00000000530	ythdc1	81	71.963	ENSAPOG00000013997	ythdc1	57	78.302	Acanthochromis_polyacanthus
ENSXCOG00000000530	ythdc1	86	60.050	ENSACIG00000019728	ythdc1	72	63.270	Amphilophus_citrinellus
ENSXCOG00000000530	ythdc1	81	69.159	ENSAOCG00000000239	ythdc1	52	77.358	Amphiprion_ocellaris
ENSXCOG00000000530	ythdc1	81	73.832	ENSAPEG00000000618	ythdc1	56	77.358	Amphiprion_percula
ENSXCOG00000000530	ythdc1	80	71.698	ENSATEG00000023007	ythdc1	57	71.429	Anabas_testudineus
ENSXCOG00000000530	ythdc1	79	56.198	ENSANAG00000001522	YTHDC1	50	52.574	Aotus_nancymaae
ENSXCOG00000000530	ythdc1	82	66.667	ENSACLG00000019371	ythdc1	52	76.415	Astatotilapia_calliptera
ENSXCOG00000000530	ythdc1	79	56.198	ENSCJAG00000009934	YTHDC1	50	52.574	Callithrix_jacchus
ENSXCOG00000000530	ythdc1	79	52.308	ENSCAFG00020027112	YTHDC1	50	50.534	Canis_lupus_dingo
ENSXCOG00000000530	ythdc1	87	50.694	ENSCHIG00000004810	YTHDC1	71	50.000	Capra_hircus
ENSXCOG00000000530	ythdc1	79	56.198	ENSTSYG00000011668	YTHDC1	50	52.574	Carlito_syrichta
ENSXCOG00000000530	ythdc1	79	56.198	ENSCCAG00000035754	YTHDC1	50	52.574	Cebus_capucinus
ENSXCOG00000000530	ythdc1	87	51.361	ENSCATG00000036320	YTHDC1	71	50.000	Cercocebus_atys
ENSXCOG00000000530	ythdc1	79	52.692	ENSCSAG00000005252	YTHDC1	50	52.574	Chlorocebus_sabaeus
ENSXCOG00000000530	ythdc1	87	51.361	ENSCANG00000004769	YTHDC1	71	50.000	Colobus_angolensis_palliatus
ENSXCOG00000000530	ythdc1	79	55.785	ENSCGRG00000009807	Ythdc1	50	52.206	Cricetulus_griseus_crigri
ENSXCOG00000000530	ythdc1	81	66.390	ENSCSEG00000020404	ythdc1	52	67.315	Cynoglossus_semilaevis
ENSXCOG00000000530	ythdc1	85	72.642	ENSCVAG00000022349	ythdc1	52	75.238	Cyprinodon_variegatus
ENSXCOG00000000530	ythdc1	81	51.481	ENSDNOG00000004949	YTHDC1	50	52.574	Dasypus_novemcinctus
ENSXCOG00000000530	ythdc1	77	53.150	ENSECAG00000018303	YTHDC1	67	52.574	Equus_caballus
ENSXCOG00000000530	ythdc1	82	61.694	ENSELUG00000014029	ythdc1	51	60.081	Esox_lucius
ENSXCOG00000000530	ythdc1	79	55.785	ENSFCAG00000026791	YTHDC1	50	52.941	Felis_catus
ENSXCOG00000000530	ythdc1	84	72.926	ENSFHEG00000001286	ythdc1	54	75.109	Fundulus_heteroclitus
ENSXCOG00000000530	ythdc1	85	54.098	ENSGMOG00000018815	ythdc1	69	54.595	Gadus_morhua
ENSXCOG00000000530	ythdc1	72	55.785	ENSGALG00000035906	YTHDC1	62	55.556	Gallus_gallus
ENSXCOG00000000530	ythdc1	90	86.667	ENSGAFG00000001759	ythdc1	79	90.816	Gambusia_affinis
ENSXCOG00000000530	ythdc1	84	68.908	ENSGACG00000015486	ythdc1	52	74.312	Gasterosteus_aculeatus
ENSXCOG00000000530	ythdc1	87	51.361	ENSGGOG00000021958	YTHDC1	71	50.000	Gorilla_gorilla
ENSXCOG00000000530	ythdc1	82	66.667	ENSHBUG00000019288	ythdc1	52	76.415	Haplochromis_burtoni
ENSXCOG00000000530	ythdc1	79	51.807	ENSHGLG00100008060	-	50	51.807	Heterocephalus_glaber_male
ENSXCOG00000000530	ythdc1	79	53.659	ENSHGLG00100001556	-	50	50.368	Heterocephalus_glaber_male
ENSXCOG00000000530	ythdc1	91	50.120	ENSHCOG00000001520	ythdc1	57	71.875	Hippocampus_comes
ENSXCOG00000000530	ythdc1	82	57.028	ENSIPUG00000018136	ythdc1	51	56.566	Ictalurus_punctatus
ENSXCOG00000000530	ythdc1	78	56.198	ENSJJAG00000010268	Ythdc1	50	52.574	Jaculus_jaculus
ENSXCOG00000000530	ythdc1	55	68.354	ENSKMAG00000006483	ythdc1	52	69.170	Kryptolebias_marmoratus
ENSXCOG00000000530	ythdc1	70	66.667	ENSLAFG00000021592	YTHDC1	64	54.430	Loxodonta_africana
ENSXCOG00000000530	ythdc1	87	51.361	ENSMFAG00000031927	YTHDC1	71	50.000	Macaca_fascicularis
ENSXCOG00000000530	ythdc1	88	54.348	ENSMMUG00000002265	YTHDC1	69	53.261	Macaca_mulatta
ENSXCOG00000000530	ythdc1	87	51.361	ENSMNEG00000033751	YTHDC1	71	50.000	Macaca_nemestrina
ENSXCOG00000000530	ythdc1	87	51.361	ENSMLEG00000042147	YTHDC1	71	50.000	Mandrillus_leucophaeus
ENSXCOG00000000530	ythdc1	82	65.254	ENSMAMG00000013122	ythdc1	51	70.642	Mastacembelus_armatus
ENSXCOG00000000530	ythdc1	82	66.667	ENSMZEG00005023173	ythdc1	52	76.415	Maylandia_zebra
ENSXCOG00000000530	ythdc1	54	64.815	ENSMGAG00000010391	YTHDC1	51	64.151	Meleagris_gallopavo
ENSXCOG00000000530	ythdc1	79	55.785	ENSMOCG00000020201	Ythdc1	50	52.206	Microtus_ochrogaster
ENSXCOG00000000530	ythdc1	84	66.667	ENSMMOG00000021200	ythdc1	60	70.000	Mola_mola
ENSXCOG00000000530	ythdc1	89	64.151	ENSMALG00000013412	ythdc1	60	72.477	Monopterus_albus
ENSXCOG00000000530	ythdc1	89	53.986	MGP_CAROLIEiJ_G0027347	Ythdc1	69	52.899	Mus_caroli
ENSXCOG00000000530	ythdc1	94	53.497	ENSMUSG00000035851	Ythdc1	69	52.899	Mus_musculus
ENSXCOG00000000530	ythdc1	94	53.497	MGP_PahariEiJ_G0017126	Ythdc1	69	52.899	Mus_pahari
ENSXCOG00000000530	ythdc1	94	53.497	MGP_SPRETEiJ_G0028339	Ythdc1	69	52.899	Mus_spretus
ENSXCOG00000000530	ythdc1	78	52.308	ENSMLUG00000016300	YTHDC1	50	52.941	Myotis_lucifugus
ENSXCOG00000000530	ythdc1	66	52.973	ENSNGAG00000024000	Ythdc1	58	52.000	Nannospalax_galili
ENSXCOG00000000530	ythdc1	76	56.510	ENSNBRG00000007663	ythdc1	67	62.198	Neolamprologus_brichardi
ENSXCOG00000000530	ythdc1	87	50.340	ENSNLEG00000009202	YTHDC1	71	48.980	Nomascus_leucogenys
ENSXCOG00000000530	ythdc1	86	94.286	ENSONIG00000012651	ythdc1	58	91.667	Oreochromis_niloticus
ENSXCOG00000000530	ythdc1	82	61.798	ENSOCUG00000015886	YTHDC1	52	62.105	Oryctolagus_cuniculus
ENSXCOG00000000530	ythdc1	82	71.845	ENSORLG00000030544	ythdc1	53	73.267	Oryzias_latipes
ENSXCOG00000000530	ythdc1	82	72.549	ENSORLG00020019316	ythdc1	53	73.267	Oryzias_latipes_hni
ENSXCOG00000000530	ythdc1	81	72.115	ENSOMEG00000000551	ythdc1	54	72.816	Oryzias_melastigma
ENSXCOG00000000530	ythdc1	79	53.077	ENSOGAG00000003362	YTHDC1	50	52.941	Otolemur_garnettii
ENSXCOG00000000530	ythdc1	87	51.361	ENSPPAG00000041315	YTHDC1	71	50.000	Pan_paniscus
ENSXCOG00000000530	ythdc1	78	54.959	ENSPTIG00000015527	YTHDC1	50	52.206	Panthera_tigris_altaica
ENSXCOG00000000530	ythdc1	87	51.361	ENSPTRG00000016105	YTHDC1	71	50.000	Pan_troglodytes
ENSXCOG00000000530	ythdc1	87	51.361	ENSPANG00000021590	YTHDC1	70	50.000	Papio_anubis
ENSXCOG00000000530	ythdc1	85	55.634	ENSPKIG00000018497	ythdc1	53	54.455	Paramormyrops_kingsleyae
ENSXCOG00000000530	ythdc1	89	53.552	ENSPMGG00000000970	-	71	51.913	Periophthalmus_magnuspinnatus
ENSXCOG00000000530	ythdc1	78	55.785	ENSPEMG00000013850	Ythdc1	50	52.206	Peromyscus_maniculatus_bairdii
ENSXCOG00000000530	ythdc1	89	82.301	ENSPFOG00000013404	ythdc1	52	92.632	Poecilia_formosa
ENSXCOG00000000530	ythdc1	60	74.609	ENSPLAG00000011079	ythdc1	53	76.562	Poecilia_latipinna
ENSXCOG00000000530	ythdc1	89	84.071	ENSPMEG00000009238	ythdc1	52	92.857	Poecilia_mexicana
ENSXCOG00000000530	ythdc1	85	91.919	ENSPREG00000016973	ythdc1	57	91.837	Poecilia_reticulata
ENSXCOG00000000530	ythdc1	82	66.667	ENSPNYG00000011687	ythdc1	52	76.415	Pundamilia_nyererei
ENSXCOG00000000530	ythdc1	82	60.643	ENSPNAG00000028365	ythdc1	54	55.208	Pygocentrus_nattereri
ENSXCOG00000000530	ythdc1	87	52.041	ENSRBIG00000028279	YTHDC1	71	51.027	Rhinopithecus_bieti
ENSXCOG00000000530	ythdc1	87	51.361	ENSRROG00000035028	YTHDC1	71	50.000	Rhinopithecus_roxellana
ENSXCOG00000000530	ythdc1	87	51.361	ENSSBOG00000022353	YTHDC1	71	50.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000000530	ythdc1	83	60.714	ENSSFOG00015003298	ythdc1	53	55.797	Scleropages_formosus
ENSXCOG00000000530	ythdc1	82	70.940	ENSSMAG00000009086	ythdc1	53	74.312	Scophthalmus_maximus
ENSXCOG00000000530	ythdc1	82	71.552	ENSSDUG00000022008	ythdc1	52	74.312	Seriola_dumerili
ENSXCOG00000000530	ythdc1	82	66.102	ENSSLDG00000007926	ythdc1	52	73.394	Seriola_lalandi_dorsalis
ENSXCOG00000000530	ythdc1	82	73.043	ENSSPAG00000011449	ythdc1	52	81.481	Stegastes_partitus
ENSXCOG00000000530	ythdc1	91	56.808	ENSTNIG00000013243	ythdc1	57	65.056	Tetraodon_nigroviridis
ENSXCOG00000000530	ythdc1	82	47.000	ENSUMAG00000013668	YTHDC1	54	46.360	Ursus_maritimus
ENSXCOG00000000530	ythdc1	79	52.308	ENSVVUG00000005387	YTHDC1	54	47.492	Vulpes_vulpes
ENSXCOG00000000530	ythdc1	85	100.000	ENSXMAG00000005196	ythdc1	52	100.000	Xiphophorus_maculatus