EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 10515 bases
Position: chrKQ557225.1:44233136-44243650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001142	tRNA-synt_2d	PF01409.20	6.5e-28	1	2
ENSXCOP00000001142	tRNA-synt_2d	PF01409.20	6.5e-28	2	2
ENSXCOP00000001167	tRNA-synt_2d	PF01409.20	8.2e-28	1	2
ENSXCOP00000001167	tRNA-synt_2d	PF01409.20	8.2e-28	2	2
ENSXCOP00000001013	tRNA-synt_2d	PF01409.20	8.4e-28	1	2
ENSXCOP00000001013	tRNA-synt_2d	PF01409.20	8.4e-28	2	2
ENSXCOP00000001175	tRNA-synt_2d	PF01409.20	8.5e-28	1	2
ENSXCOP00000001175	tRNA-synt_2d	PF01409.20	8.5e-28	2	2
ENSXCOP00000001155	tRNA-synt_2d	PF01409.20	8.5e-28	1	2
ENSXCOP00000001155	tRNA-synt_2d	PF01409.20	8.5e-28	2	2
ENSXCOP00000001192	tRNA-synt_2d	PF01409.20	9.2e-28	1	2
ENSXCOP00000001192	tRNA-synt_2d	PF01409.20	9.2e-28	2	2
ENSXCOP00000000912	tRNA-synt_2d	PF01409.20	9.2e-28	1	2
ENSXCOP00000000912	tRNA-synt_2d	PF01409.20	9.2e-28	2	2
ENSXCOP00000001186	tRNA-synt_2d	PF01409.20	1e-27	1	2
ENSXCOP00000001186	tRNA-synt_2d	PF01409.20	1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001191	-	1008	-	ENSXCOP00000001175	335 (aa)	-	-
ENSXCOT00000001183	-	1002	-	ENSXCOP00000001167	333 (aa)	-	-
ENSXCOT00000000924	-	1011	-	ENSXCOP00000000912	336 (aa)	-	-
ENSXCOT00000001171	-	987	-	ENSXCOP00000001155	328 (aa)	-	-
ENSXCOT00000001026	-	981	-	ENSXCOP00000001013	326 (aa)	-	-
ENSXCOT00000001208	-	1029	-	ENSXCOP00000001192	342 (aa)	-	-
ENSXCOT00000001155	-	915	-	ENSXCOP00000001142	304 (aa)	-	-
ENSXCOT00000001202	-	1107	-	ENSXCOP00000001186	368 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000559	-	60	68.132	ENSG00000145982	FARS2	97	65.657	Homo_sapiens
ENSXCOG00000000559	-	58	87.429	ENSAOCG00000016927	fars2	51	79.310	Amphiprion_ocellaris
ENSXCOG00000000559	-	55	54.098	ENSAPLG00000005643	FARS2	50	70.000	Anas_platyrhynchos
ENSXCOG00000000559	-	60	82.967	ENSACLG00000018607	fars2	50	68.511	Astatotilapia_calliptera
ENSXCOG00000000559	-	60	68.132	ENSBTAG00000018072	FARS2	50	63.054	Bos_taurus
ENSXCOG00000000559	-	66	51.185	WBGene00013361	fars-2	56	47.479	Caenorhabditis_elegans
ENSXCOG00000000559	-	60	68.132	ENSCJAG00000021369	FARS2	50	63.054	Callithrix_jacchus
ENSXCOG00000000559	-	57	59.195	ENSCSAVG00000011625	-	51	46.491	Ciona_savignyi
ENSXCOG00000000559	-	60	87.912	ENSCVAG00000008305	fars2	52	80.788	Cyprinodon_variegatus
ENSXCOG00000000559	-	60	68.132	ENSEASG00005012111	FARS2	50	63.054	Equus_asinus_asinus
ENSXCOG00000000559	-	60	66.484	ENSGALG00000042481	FARS2	52	55.745	Gallus_gallus
ENSXCOG00000000559	-	60	68.132	ENSJJAG00000002799	Fars2	55	56.275	Jaculus_jaculus
ENSXCOG00000000559	-	58	89.266	ENSKMAG00000002336	fars2	55	78.279	Kryptolebias_marmoratus
ENSXCOG00000000559	-	58	78.286	ENSLACG00000006541	FARS2	64	78.286	Latimeria_chalumnae
ENSXCOG00000000559	-	60	68.681	ENSMMUG00000016352	FARS2	53	65.327	Macaca_mulatta
ENSXCOG00000000559	-	55	53.005	ENSMGAG00000003984	FARS2	57	53.005	Meleagris_gallopavo
ENSXCOG00000000559	-	58	68.362	ENSOANG00000001199	-	66	68.362	Ornithorhynchus_anatinus
ENSXCOG00000000559	-	60	83.516	ENSORLG00020010934	fars2	51	69.362	Oryzias_latipes_hni
ENSXCOG00000000559	-	60	83.516	ENSORLG00015007676	fars2	51	69.362	Oryzias_latipes_hsok
ENSXCOG00000000559	-	60	85.165	ENSOMEG00000001412	fars2	50	70.638	Oryzias_melastigma
ENSXCOG00000000559	-	52	63.522	ENSOARG00000018718	-	61	63.522	Ovis_aries
ENSXCOG00000000559	-	57	65.143	ENSPMAG00000001580	fars2	53	55.856	Petromyzon_marinus
ENSXCOG00000000559	-	53	95.000	ENSPLAG00000010636	fars2	58	71.429	Poecilia_latipinna
ENSXCOG00000000559	-	59	96.629	ENSPMEG00000016166	fars2	61	96.629	Poecilia_mexicana
ENSXCOG00000000559	-	63	33.203	YPR047W	MSF1	53	33.203	Saccharomyces_cerevisiae
ENSXCOG00000000559	-	60	75.275	ENSSFOG00015020636	fars2	51	62.553	Scleropages_formosus
ENSXCOG00000000559	-	62	66.489	ENSSARG00000001129	FARS2	62	61.722	Sorex_araneus
ENSXCOG00000000559	-	62	65.957	ENSSSCG00000038717	FARS2	59	60.556	Sus_scrofa
ENSXCOG00000000559	-	60	69.231	ENSTGUG00000002269	FARS2	50	64.039	Taeniopygia_guttata
ENSXCOG00000000559	-	60	80.978	ENSTRUG00000005887	fars2	50	80.978	Takifugu_rubripes