EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000715 (Gene tree)
Gene ID: -
Gene Symbol: tyw3
Alias: zgc:92277
Full Name: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 14923 bases
Position: chrKQ557225.1:31311652-31326574
Accession: ZDB-GENE-040718-355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000857	TYW3	PF02676.14	3.5e-53	1	1
ENSXCOP00000000866	TYW3	PF02676.14	2e-45	1	2
ENSXCOP00000000866	TYW3	PF02676.14	2e-45	2	2
ENSXCOP00000000861	TYW3	PF02676.14	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000871	-	438	-	ENSXCOP00000000861	145 (aa)	-	-
ENSXCOT00000000867	-	768	-	ENSXCOP00000000857	255 (aa)	-	-
ENSXCOT00000000876	-	738	-	ENSXCOP00000000866	245 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000715	tyw3	83	51.770	ENSG00000162623	TYW3	100	69.643	Homo_sapiens
ENSXCOG00000000715	tyw3	99	58.672	ENSAPOG00000009462	tyw3	99	58.672	Acanthochromis_polyacanthus
ENSXCOG00000000715	tyw3	85	53.017	ENSAMEG00000003461	TYW3	90	53.017	Ailuropoda_melanoleuca
ENSXCOG00000000715	tyw3	98	57.422	ENSACIG00000002242	tyw3	77	78.022	Amphilophus_citrinellus
ENSXCOG00000000715	tyw3	99	58.672	ENSAOCG00000002161	tyw3	99	58.672	Amphiprion_ocellaris
ENSXCOG00000000715	tyw3	87	51.327	ENSAPEG00000009395	tyw3	77	78.082	Amphiprion_percula
ENSXCOG00000000715	tyw3	97	56.746	ENSATEG00000004411	-	97	56.746	Anabas_testudineus
ENSXCOG00000000715	tyw3	97	56.746	ENSATEG00000004518	tyw3	97	56.746	Anabas_testudineus
ENSXCOG00000000715	tyw3	74	57.500	ENSACAG00000011380	TYW3	74	57.500	Anolis_carolinensis
ENSXCOG00000000715	tyw3	84	51.982	ENSANAG00000034485	TYW3	88	51.982	Aotus_nancymaae
ENSXCOG00000000715	tyw3	100	55.344	ENSACLG00000022833	tyw3	100	55.344	Astatotilapia_calliptera
ENSXCOG00000000715	tyw3	72	66.120	ENSAMXG00000039965	tyw3	85	53.241	Astyanax_mexicanus
ENSXCOG00000000715	tyw3	72	64.481	ENSBTAG00000005196	TYW3	71	64.481	Bos_taurus
ENSXCOG00000000715	tyw3	84	51.982	ENSCJAG00000006550	TYW3	88	51.982	Callithrix_jacchus
ENSXCOG00000000715	tyw3	78	55.172	ENSCAFG00000032209	TYW3	87	50.000	Canis_familiaris
ENSXCOG00000000715	tyw3	83	52.212	ENSCAFG00020017095	TYW3	81	52.212	Canis_lupus_dingo
ENSXCOG00000000715	tyw3	72	66.667	ENSCHIG00000009333	TYW3	71	66.667	Capra_hircus
ENSXCOG00000000715	tyw3	78	57.018	ENSTSYG00000006369	TYW3	85	53.774	Carlito_syrichta
ENSXCOG00000000715	tyw3	84	52.423	ENSCCAG00000034210	TYW3	88	52.423	Cebus_capucinus
ENSXCOG00000000715	tyw3	84	52.423	ENSCATG00000044397	TYW3	88	52.423	Cercocebus_atys
ENSXCOG00000000715	tyw3	85	54.783	ENSCLAG00000004370	TYW3	85	54.783	Chinchilla_lanigera
ENSXCOG00000000715	tyw3	84	52.423	ENSCSAG00000001387	TYW3	88	52.423	Chlorocebus_sabaeus
ENSXCOG00000000715	tyw3	92	48.047	ENSCPBG00000017047	TYW3	90	48.472	Chrysemys_picta_bellii
ENSXCOG00000000715	tyw3	84	52.423	ENSCANG00000036108	TYW3	88	52.423	Colobus_angolensis_palliatus
ENSXCOG00000000715	tyw3	82	54.505	ENSCGRG00001022820	Tyw3	98	60.563	Cricetulus_griseus_chok1gshd
ENSXCOG00000000715	tyw3	72	59.434	ENSCGRG00000003132	Tyw3	92	61.250	Cricetulus_griseus_crigri
ENSXCOG00000000715	tyw3	73	76.596	ENSCSEG00000021219	tyw3	95	57.196	Cynoglossus_semilaevis
ENSXCOG00000000715	tyw3	76	75.130	ENSCVAG00000003270	tyw3	100	58.647	Cyprinodon_variegatus
ENSXCOG00000000715	tyw3	85	58.904	ENSDARG00000038222	tyw3	73	64.865	Danio_rerio
ENSXCOG00000000715	tyw3	76	60.000	ENSDNOG00000033863	TYW3	89	51.101	Dasypus_novemcinctus
ENSXCOG00000000715	tyw3	71	58.654	ENSDORG00000002718	-	73	58.654	Dipodomys_ordii
ENSXCOG00000000715	tyw3	74	55.556	ENSETEG00000012572	TYW3	63	66.667	Echinops_telfairi
ENSXCOG00000000715	tyw3	56	50.704	ENSEBUG00000014020	tyw3	55	50.704	Eptatretus_burgeri
ENSXCOG00000000715	tyw3	85	52.155	ENSEASG00005007776	TYW3	89	52.155	Equus_asinus_asinus
ENSXCOG00000000715	tyw3	85	52.155	ENSECAG00000007888	TYW3	89	52.155	Equus_caballus
ENSXCOG00000000715	tyw3	89	49.138	ENSEEUG00000009289	TYW3	88	50.000	Erinaceus_europaeus
ENSXCOG00000000715	tyw3	100	49.630	ENSELUG00000023000	tyw3	100	49.630	Esox_lucius
ENSXCOG00000000715	tyw3	83	52.863	ENSFCAG00000035340	TYW3	88	52.863	Felis_catus
ENSXCOG00000000715	tyw3	83	58.824	ENSFDAG00000003816	TYW3	85	58.296	Fukomys_damarensis
ENSXCOG00000000715	tyw3	87	69.198	ENSFHEG00000001347	tyw3	95	69.198	Fundulus_heteroclitus
ENSXCOG00000000715	tyw3	82	46.491	ENSGALG00000032549	TYW3	87	46.491	Gallus_gallus
ENSXCOG00000000715	tyw3	100	79.412	ENSGAFG00000012457	tyw3	100	79.412	Gambusia_affinis
ENSXCOG00000000715	tyw3	73	78.495	ENSGACG00000014630	tyw3	81	78.495	Gasterosteus_aculeatus
ENSXCOG00000000715	tyw3	83	51.770	ENSGGOG00000013676	TYW3	87	51.770	Gorilla_gorilla
ENSXCOG00000000715	tyw3	82	57.207	ENSHGLG00000004440	TYW3	86	57.207	Heterocephalus_glaber_female
ENSXCOG00000000715	tyw3	85	51.163	ENSHGLG00100018315	TYW3	85	53.604	Heterocephalus_glaber_male
ENSXCOG00000000715	tyw3	74	64.550	ENSHCOG00000016590	TYW3	91	64.550	Hippocampus_comes
ENSXCOG00000000715	tyw3	73	67.742	ENSIPUG00000012907	tyw3	62	67.742	Ictalurus_punctatus
ENSXCOG00000000715	tyw3	83	46.018	ENSSTOG00000028816	TYW3	81	46.018	Ictidomys_tridecemlineatus
ENSXCOG00000000715	tyw3	54	64.234	ENSJJAG00000005103	-	94	64.234	Jaculus_jaculus
ENSXCOG00000000715	tyw3	100	62.409	ENSKMAG00000020761	tyw3	100	62.774	Kryptolebias_marmoratus
ENSXCOG00000000715	tyw3	97	58.498	ENSLBEG00000021318	tyw3	97	58.594	Labrus_bergylta
ENSXCOG00000000715	tyw3	72	65.217	ENSLACG00000012636	TYW3	86	54.751	Latimeria_chalumnae
ENSXCOG00000000715	tyw3	75	66.146	ENSLOCG00000003437	tyw3	85	56.682	Lepisosteus_oculatus
ENSXCOG00000000715	tyw3	85	53.913	ENSLAFG00000011373	TYW3	89	53.913	Loxodonta_africana
ENSXCOG00000000715	tyw3	84	51.542	ENSMFAG00000003496	TYW3	88	51.542	Macaca_fascicularis
ENSXCOG00000000715	tyw3	76	56.757	ENSMMUG00000014595	TYW3	86	46.698	Macaca_mulatta
ENSXCOG00000000715	tyw3	84	51.542	ENSMNEG00000028346	TYW3	88	51.542	Macaca_nemestrina
ENSXCOG00000000715	tyw3	84	52.423	ENSMLEG00000041647	TYW3	88	52.423	Mandrillus_leucophaeus
ENSXCOG00000000715	tyw3	100	56.391	ENSMAMG00000010987	tyw3	100	57.565	Mastacembelus_armatus
ENSXCOG00000000715	tyw3	100	53.676	ENSMZEG00005023808	tyw3	100	54.909	Maylandia_zebra
ENSXCOG00000000715	tyw3	66	55.789	ENSMGAG00000012152	TYW3	98	46.739	Meleagris_gallopavo
ENSXCOG00000000715	tyw3	80	42.289	ENSMAUG00000000522	Tyw3	92	56.250	Mesocricetus_auratus
ENSXCOG00000000715	tyw3	85	54.783	ENSMICG00000015883	TYW3	86	54.783	Microcebus_murinus
ENSXCOG00000000715	tyw3	61	65.909	ENSMOCG00000021348	Tyw3	59	57.692	Microtus_ochrogaster
ENSXCOG00000000715	tyw3	98	58.140	ENSMMOG00000021442	tyw3	98	58.140	Mola_mola
ENSXCOG00000000715	tyw3	73	62.567	ENSMODG00000019082	TYW3	66	62.567	Monodelphis_domestica
ENSXCOG00000000715	tyw3	100	58.364	ENSMALG00000014442	tyw3	100	58.364	Monopterus_albus
ENSXCOG00000000715	tyw3	73	65.079	MGP_CAROLIEiJ_G0025755	Tyw3	98	63.380	Mus_caroli
ENSXCOG00000000715	tyw3	73	64.021	ENSMUSG00000047583	Tyw3	98	62.676	Mus_musculus
ENSXCOG00000000715	tyw3	73	65.079	MGP_PahariEiJ_G0027206	Tyw3	98	63.380	Mus_pahari
ENSXCOG00000000715	tyw3	73	64.021	MGP_SPRETEiJ_G0026708	Tyw3	98	61.972	Mus_spretus
ENSXCOG00000000715	tyw3	85	52.155	ENSMPUG00000010967	TYW3	90	52.155	Mustela_putorius_furo
ENSXCOG00000000715	tyw3	83	52.000	ENSMLUG00000005999	TYW3	87	52.000	Myotis_lucifugus
ENSXCOG00000000715	tyw3	56	65.068	ENSNGAG00000000586	-	100	65.068	Nannospalax_galili
ENSXCOG00000000715	tyw3	84	52.423	ENSNLEG00000009556	TYW3	88	52.423	Nomascus_leucogenys
ENSXCOG00000000715	tyw3	64	50.610	ENSOPRG00000014182	TYW3	64	50.610	Ochotona_princeps
ENSXCOG00000000715	tyw3	73	63.636	ENSODEG00000005361	TYW3	93	63.235	Octodon_degus
ENSXCOG00000000715	tyw3	73	71.658	ENSONIG00000019965	tyw3	94	71.658	Oreochromis_niloticus
ENSXCOG00000000715	tyw3	77	51.786	ENSOANG00000002172	-	64	66.154	Ornithorhynchus_anatinus
ENSXCOG00000000715	tyw3	85	54.783	ENSOCUG00000003043	TYW3	89	54.783	Oryctolagus_cuniculus
ENSXCOG00000000715	tyw3	99	55.639	ENSORLG00000004470	tyw3	98	55.639	Oryzias_latipes
ENSXCOG00000000715	tyw3	99	54.135	ENSORLG00020003793	tyw3	98	54.887	Oryzias_latipes_hni
ENSXCOG00000000715	tyw3	99	53.383	ENSORLG00015006950	tyw3	98	54.135	Oryzias_latipes_hsok
ENSXCOG00000000715	tyw3	99	53.788	ENSOMEG00000016176	tyw3	96	64.815	Oryzias_melastigma
ENSXCOG00000000715	tyw3	86	53.814	ENSOGAG00000011590	-	91	53.814	Otolemur_garnettii
ENSXCOG00000000715	tyw3	82	49.321	ENSOGAG00000025029	-	86	49.321	Otolemur_garnettii
ENSXCOG00000000715	tyw3	72	66.120	ENSOARG00000012508	TYW3	71	66.120	Ovis_aries
ENSXCOG00000000715	tyw3	83	51.770	ENSPPAG00000043438	TYW3	87	51.770	Pan_paniscus
ENSXCOG00000000715	tyw3	83	53.778	ENSPPRG00000023209	TYW3	88	53.778	Panthera_pardus
ENSXCOG00000000715	tyw3	83	52.863	ENSPTIG00000017448	TYW3	88	52.863	Panthera_tigris_altaica
ENSXCOG00000000715	tyw3	83	51.770	ENSPTRG00000000867	TYW3	87	51.770	Pan_troglodytes
ENSXCOG00000000715	tyw3	84	52.423	ENSPANG00000013397	TYW3	88	52.423	Papio_anubis
ENSXCOG00000000715	tyw3	89	53.012	ENSPKIG00000009802	tyw3	89	50.000	Paramormyrops_kingsleyae
ENSXCOG00000000715	tyw3	77	53.509	ENSPSIG00000008432	TYW3	72	60.484	Pelodiscus_sinensis
ENSXCOG00000000715	tyw3	99	56.557	ENSPMGG00000005290	tyw3	98	56.557	Periophthalmus_magnuspinnatus
ENSXCOG00000000715	tyw3	72	65.574	ENSPEMG00000013100	Tyw3	94	63.235	Peromyscus_maniculatus_bairdii
ENSXCOG00000000715	tyw3	73	65.079	ENSPCIG00000024204	TYW3	75	54.867	Phascolarctos_cinereus
ENSXCOG00000000715	tyw3	100	82.707	ENSPFOG00000000927	tyw3	100	82.707	Poecilia_formosa
ENSXCOG00000000715	tyw3	100	81.579	ENSPLAG00000009891	tyw3	100	81.579	Poecilia_latipinna
ENSXCOG00000000715	tyw3	100	82.331	ENSPMEG00000002006	tyw3	100	98.246	Poecilia_mexicana
ENSXCOG00000000715	tyw3	100	80.075	ENSPREG00000012341	tyw3	100	80.075	Poecilia_reticulata
ENSXCOG00000000715	tyw3	73	61.376	ENSPPYG00000001234	TYW3	85	53.182	Pongo_abelii
ENSXCOG00000000715	tyw3	82	54.091	ENSPCAG00000000524	TYW3	85	54.091	Procavia_capensis
ENSXCOG00000000715	tyw3	85	53.913	ENSPCOG00000023207	TYW3	86	53.913	Propithecus_coquereli
ENSXCOG00000000715	tyw3	73	64.021	ENSPVAG00000002356	TYW3	92	52.609	Pteropus_vampyrus
ENSXCOG00000000715	tyw3	100	50.667	ENSPNYG00000017982	tyw3	96	51.000	Pundamilia_nyererei
ENSXCOG00000000715	tyw3	89	56.652	ENSPNAG00000028431	tyw3	73	66.129	Pygocentrus_nattereri
ENSXCOG00000000715	tyw3	73	65.079	ENSRNOG00000028328	Tyw3	64	65.079	Rattus_norvegicus
ENSXCOG00000000715	tyw3	74	55.046	ENSRBIG00000040137	-	78	55.046	Rhinopithecus_bieti
ENSXCOG00000000715	tyw3	84	51.982	ENSRROG00000034171	TYW3	88	51.982	Rhinopithecus_roxellana
ENSXCOG00000000715	tyw3	67	30.693	YGL050W	-	73	30.693	Saccharomyces_cerevisiae
ENSXCOG00000000715	tyw3	84	52.863	ENSSBOG00000022917	TYW3	88	52.863	Saimiri_boliviensis_boliviensis
ENSXCOG00000000715	tyw3	89	57.709	ENSSFOG00015021842	tyw3	75	63.590	Scleropages_formosus
ENSXCOG00000000715	tyw3	100	56.506	ENSSMAG00000019609	tyw3	97	56.506	Scophthalmus_maximus
ENSXCOG00000000715	tyw3	100	58.582	ENSSDUG00000003674	tyw3	100	58.582	Seriola_dumerili
ENSXCOG00000000715	tyw3	100	58.582	ENSSLDG00000010425	tyw3	100	58.582	Seriola_lalandi_dorsalis
ENSXCOG00000000715	tyw3	78	53.982	ENSSARG00000001097	TYW3	66	62.687	Sorex_araneus
ENSXCOG00000000715	tyw3	72	60.215	ENSSPUG00000007880	TYW3	91	46.383	Sphenodon_punctatus
ENSXCOG00000000715	tyw3	100	58.909	ENSSPAG00000013786	tyw3	100	60.364	Stegastes_partitus
ENSXCOG00000000715	tyw3	73	62.434	ENSSSCG00000003779	TYW3	73	62.434	Sus_scrofa
ENSXCOG00000000715	tyw3	100	55.515	ENSTRUG00000023563	tyw3	100	55.515	Takifugu_rubripes
ENSXCOG00000000715	tyw3	73	70.053	ENSTNIG00000003368	tyw3	94	70.053	Tetraodon_nigroviridis
ENSXCOG00000000715	tyw3	82	55.656	ENSTBEG00000017002	TYW3	85	55.656	Tupaia_belangeri
ENSXCOG00000000715	tyw3	87	55.263	ENSTTRG00000010464	TYW3	89	52.361	Tursiops_truncatus
ENSXCOG00000000715	tyw3	85	52.586	ENSUAMG00000010803	TYW3	92	52.586	Ursus_americanus
ENSXCOG00000000715	tyw3	85	52.586	ENSUMAG00000006460	TYW3	91	52.586	Ursus_maritimus
ENSXCOG00000000715	tyw3	73	65.241	ENSVPAG00000006900	TYW3	100	65.241	Vicugna_pacos
ENSXCOG00000000715	tyw3	83	52.212	ENSVVUG00000006902	TYW3	81	52.212	Vulpes_vulpes
ENSXCOG00000000715	tyw3	73	65.405	ENSXETG00000002996	tyw3	73	65.761	Xenopus_tropicalis
ENSXCOG00000000715	tyw3	100	100.000	ENSXMAG00000006464	tyw3	100	100.000	Xiphophorus_maculatus