EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000762 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5252 bases
Position: chrKQ557206.1:9210679-9215930
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000900	zf-C2H2	PF00096.26	2e-18	1	2
ENSXCOP00000000900	zf-C2H2	PF00096.26	2e-18	2	2
ENSXCOP00000000900	zf-met	PF12874.7	4.4e-10	1	2
ENSXCOP00000000900	zf-met	PF12874.7	4.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000000912	-	3558	-	ENSXCOP00000000900	1185 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000762	si:ch211-212k18.5	99	71.603	ENSAPOG00000013387	si:ch211-212k18.5	99	71.780	Acanthochromis_polyacanthus
ENSXCOG00000000762	si:ch211-212k18.5	79	76.622	ENSACIG00000019922	si:ch211-212k18.5	99	76.701	Amphilophus_citrinellus
ENSXCOG00000000762	si:ch211-212k18.5	99	72.886	ENSAOCG00000010737	si:ch211-212k18.5	99	72.993	Amphiprion_ocellaris
ENSXCOG00000000762	si:ch211-212k18.5	99	73.134	ENSAPEG00000006751	si:ch211-212k18.5	99	73.244	Amphiprion_percula
ENSXCOG00000000762	si:ch211-212k18.5	54	45.939	ENSAPEG00000020215	sall2	68	48.248	Amphiprion_percula
ENSXCOG00000000762	si:ch211-212k18.5	56	44.183	ENSATEG00000007303	sall2	52	71.111	Anabas_testudineus
ENSXCOG00000000762	si:ch211-212k18.5	79	78.165	ENSATEG00000001254	si:ch211-212k18.5	99	77.468	Anabas_testudineus
ENSXCOG00000000762	si:ch211-212k18.5	99	71.675	ENSACLG00000009709	si:ch211-212k18.5	99	71.500	Astatotilapia_calliptera
ENSXCOG00000000762	si:ch211-212k18.5	57	64.865	ENSACLG00000019867	sall2	52	47.862	Astatotilapia_calliptera
ENSXCOG00000000762	si:ch211-212k18.5	99	55.119	ENSAMXG00000010979	si:ch211-212k18.5	99	53.610	Astyanax_mexicanus
ENSXCOG00000000762	si:ch211-212k18.5	81	38.575	ENSCSEG00000021148	sall2	70	39.232	Cynoglossus_semilaevis
ENSXCOG00000000762	si:ch211-212k18.5	99	66.774	ENSCSEG00000004426	si:ch211-212k18.5	99	65.822	Cynoglossus_semilaevis
ENSXCOG00000000762	si:ch211-212k18.5	99	84.545	ENSCVAG00000007475	si:ch211-212k18.5	99	84.083	Cyprinodon_variegatus
ENSXCOG00000000762	si:ch211-212k18.5	59	49.790	ENSDARG00000075116	sall2	66	59.184	Danio_rerio
ENSXCOG00000000762	si:ch211-212k18.5	99	53.498	ENSDARG00000103316	si:ch211-212k18.5	99	52.627	Danio_rerio
ENSXCOG00000000762	si:ch211-212k18.5	73	58.696	ENSELUG00000004389	sall2	62	58.696	Esox_lucius
ENSXCOG00000000762	si:ch211-212k18.5	99	54.473	ENSELUG00000024534	si:ch211-212k18.5	99	55.016	Esox_lucius
ENSXCOG00000000762	si:ch211-212k18.5	99	85.099	ENSFHEG00000017264	si:ch211-212k18.5	99	84.641	Fundulus_heteroclitus
ENSXCOG00000000762	si:ch211-212k18.5	100	94.467	ENSGAFG00000003746	si:ch211-212k18.5	100	94.467	Gambusia_affinis
ENSXCOG00000000762	si:ch211-212k18.5	99	71.839	ENSHBUG00000019672	si:ch211-212k18.5	99	71.790	Haplochromis_burtoni
ENSXCOG00000000762	si:ch211-212k18.5	98	59.966	ENSHCOG00000002842	si:ch211-212k18.5	99	59.130	Hippocampus_comes
ENSXCOG00000000762	si:ch211-212k18.5	99	52.036	ENSIPUG00000002559	sall2	96	52.409	Ictalurus_punctatus
ENSXCOG00000000762	si:ch211-212k18.5	55	69.697	ENSKMAG00000020172	sall2	50	55.102	Kryptolebias_marmoratus
ENSXCOG00000000762	si:ch211-212k18.5	100	73.697	ENSKMAG00000019657	si:ch211-212k18.5	98	73.924	Kryptolebias_marmoratus
ENSXCOG00000000762	si:ch211-212k18.5	100	67.074	ENSLBEG00000020887	si:ch211-212k18.5	99	66.529	Labrus_bergylta
ENSXCOG00000000762	si:ch211-212k18.5	70	80.630	ENSMAMG00000015887	si:ch211-212k18.5	99	79.113	Mastacembelus_armatus
ENSXCOG00000000762	si:ch211-212k18.5	56	68.571	ENSMAMG00000016229	sall2	50	68.571	Mastacembelus_armatus
ENSXCOG00000000762	si:ch211-212k18.5	99	71.757	ENSMZEG00005021214	si:ch211-212k18.5	99	71.582	Maylandia_zebra
ENSXCOG00000000762	si:ch211-212k18.5	93	76.529	ENSMMOG00000012726	si:ch211-212k18.5	99	75.528	Mola_mola
ENSXCOG00000000762	si:ch211-212k18.5	92	70.732	ENSMALG00000000979	si:ch211-212k18.5	97	70.993	Monopterus_albus
ENSXCOG00000000762	si:ch211-212k18.5	70	46.629	ENSNBRG00000017645	sall2	62	49.202	Neolamprologus_brichardi
ENSXCOG00000000762	si:ch211-212k18.5	94	70.793	ENSNBRG00000023948	si:ch211-212k18.5	96	70.410	Neolamprologus_brichardi
ENSXCOG00000000762	si:ch211-212k18.5	100	67.184	ENSORLG00000030429	si:ch211-212k18.5	99	67.081	Oryzias_latipes
ENSXCOG00000000762	si:ch211-212k18.5	54	44.974	ENSORLG00000026871	sall2	78	39.960	Oryzias_latipes
ENSXCOG00000000762	si:ch211-212k18.5	100	66.857	ENSORLG00020008145	si:ch211-212k18.5	99	67.330	Oryzias_latipes_hni
ENSXCOG00000000762	si:ch211-212k18.5	54	44.841	ENSORLG00020007873	sall2	78	39.759	Oryzias_latipes_hni
ENSXCOG00000000762	si:ch211-212k18.5	54	44.284	ENSORLG00015002422	sall2	78	39.442	Oryzias_latipes_hsok
ENSXCOG00000000762	si:ch211-212k18.5	100	66.449	ENSORLG00015004982	si:ch211-212k18.5	99	66.915	Oryzias_latipes_hsok
ENSXCOG00000000762	si:ch211-212k18.5	100	66.855	ENSOMEG00000013949	si:ch211-212k18.5	99	67.931	Oryzias_melastigma
ENSXCOG00000000762	si:ch211-212k18.5	57	54.348	ENSOMEG00000012904	sall2	50	54.348	Oryzias_melastigma
ENSXCOG00000000762	si:ch211-212k18.5	77	49.679	ENSPKIG00000009207	sall2	62	64.286	Paramormyrops_kingsleyae
ENSXCOG00000000762	si:ch211-212k18.5	94	63.955	ENSPMGG00000018714	si:ch211-212k18.5	99	63.773	Periophthalmus_magnuspinnatus
ENSXCOG00000000762	si:ch211-212k18.5	55	66.667	ENSPFOG00000016504	sall2	51	49.153	Poecilia_formosa
ENSXCOG00000000762	si:ch211-212k18.5	99	92.429	ENSPFOG00000023705	si:ch211-212k18.5	99	91.923	Poecilia_formosa
ENSXCOG00000000762	si:ch211-212k18.5	55	66.667	ENSPLAG00000018320	sall2	51	49.153	Poecilia_latipinna
ENSXCOG00000000762	si:ch211-212k18.5	100	94.055	ENSPLAG00000002577	si:ch211-212k18.5	100	94.055	Poecilia_latipinna
ENSXCOG00000000762	si:ch211-212k18.5	55	66.667	ENSPMEG00000006335	sall2	51	49.153	Poecilia_mexicana
ENSXCOG00000000762	si:ch211-212k18.5	99	92.512	ENSPMEG00000016395	si:ch211-212k18.5	99	91.000	Poecilia_mexicana
ENSXCOG00000000762	si:ch211-212k18.5	100	92.238	ENSPREG00000005292	si:ch211-212k18.5	99	92.167	Poecilia_reticulata
ENSXCOG00000000762	si:ch211-212k18.5	55	66.667	ENSPREG00000021908	sall2	51	49.153	Poecilia_reticulata
ENSXCOG00000000762	si:ch211-212k18.5	99	71.106	ENSPNYG00000021576	si:ch211-212k18.5	99	71.260	Pundamilia_nyererei
ENSXCOG00000000762	si:ch211-212k18.5	96	56.874	ENSPNAG00000006123	si:ch211-212k18.5	95	55.942	Pygocentrus_nattereri
ENSXCOG00000000762	si:ch211-212k18.5	100	71.440	ENSSMAG00000006241	si:ch211-212k18.5	99	71.477	Scophthalmus_maximus
ENSXCOG00000000762	si:ch211-212k18.5	100	75.083	ENSSDUG00000006164	si:ch211-212k18.5	99	75.187	Seriola_dumerili
ENSXCOG00000000762	si:ch211-212k18.5	72	64.865	ENSSLDG00000001653	sall2	51	81.579	Seriola_lalandi_dorsalis
ENSXCOG00000000762	si:ch211-212k18.5	100	75.083	ENSSLDG00000003393	si:ch211-212k18.5	99	75.187	Seriola_lalandi_dorsalis
ENSXCOG00000000762	si:ch211-212k18.5	94	73.986	ENSSPAG00000013435	si:ch211-212k18.5	97	73.986	Stegastes_partitus
ENSXCOG00000000762	si:ch211-212k18.5	94	67.475	ENSTRUG00000025082	si:ch211-212k18.5	98	66.835	Takifugu_rubripes
ENSXCOG00000000762	si:ch211-212k18.5	100	97.684	ENSXMAG00000001461	si:ch211-212k18.5	100	97.684	Xiphophorus_maculatus