EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000000809 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 14408 bases
Position: chrKQ557206.1:9300229-9314636
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000000988	ResIII	PF04851.15	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001000	-	3336	-	ENSXCOP00000000988	1111 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000000809	chd3	91	68.814	ENSXCOG00000019269	-	52	73.434
ENSXCOG00000000809	chd3	90	72.233	ENSXCOG00000014202	chd5	93	72.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000809	chd3	96	83.089	ENSG00000170004	CHD3	69	80.556	Homo_sapiens
ENSXCOG00000000809	chd3	85	93.333	ENSAPOG00000005614	chd3	58	92.542	Acanthochromis_polyacanthus
ENSXCOG00000000809	chd3	85	92.455	ENSACIG00000019671	chd3	62	92.921	Amphilophus_citrinellus
ENSXCOG00000000809	chd3	97	92.188	ENSAOCG00000023784	chd3	60	93.333	Amphiprion_ocellaris
ENSXCOG00000000809	chd3	99	92.076	ENSAPEG00000006341	chd3	58	92.076	Amphiprion_percula
ENSXCOG00000000809	chd3	93	92.085	ENSATEG00000000848	chd3	59	87.584	Anabas_testudineus
ENSXCOG00000000809	chd3	89	83.089	ENSANAG00000034323	CHD3	50	82.864	Aotus_nancymaae
ENSXCOG00000000809	chd3	96	88.327	ENSACLG00000009222	chd3	94	88.716	Astatotilapia_calliptera
ENSXCOG00000000809	chd3	96	82.976	ENSBTAG00000014377	CHD3	51	83.089	Bos_taurus
ENSXCOG00000000809	chd3	96	83.089	ENSCJAG00000014766	CHD3	52	82.864	Callithrix_jacchus
ENSXCOG00000000809	chd3	96	83.296	ENSCAFG00000016859	CHD3	51	83.296	Canis_familiaris
ENSXCOG00000000809	chd3	89	83.296	ENSCAFG00020007422	CHD3	50	91.892	Canis_lupus_dingo
ENSXCOG00000000809	chd3	96	83.089	ENSCHIG00000016737	CHD3	51	83.202	Capra_hircus
ENSXCOG00000000809	chd3	96	83.089	ENSTSYG00000035658	CHD3	52	82.864	Carlito_syrichta
ENSXCOG00000000809	chd3	96	77.565	ENSCAPG00000014864	CHD3	50	77.001	Cavia_aperea
ENSXCOG00000000809	chd3	96	82.976	ENSCPOG00000022653	CHD3	51	82.413	Cavia_porcellus
ENSXCOG00000000809	chd3	96	83.089	ENSCCAG00000034792	CHD3	51	82.864	Cebus_capucinus
ENSXCOG00000000809	chd3	96	82.976	ENSCATG00000041717	CHD3	52	82.751	Cercocebus_atys
ENSXCOG00000000809	chd3	96	82.864	ENSCLAG00000010523	CHD3	53	82.751	Chinchilla_lanigera
ENSXCOG00000000809	chd3	96	82.864	ENSCSAG00000011122	CHD3	52	82.864	Chlorocebus_sabaeus
ENSXCOG00000000809	chd3	92	83.447	ENSCPBG00000011966	CHD3	94	75.808	Chrysemys_picta_bellii
ENSXCOG00000000809	chd3	96	82.976	ENSCANG00000037641	CHD3	50	91.429	Colobus_angolensis_palliatus
ENSXCOG00000000809	chd3	93	83.183	ENSCGRG00001011306	Chd3	52	83.070	Cricetulus_griseus_chok1gshd
ENSXCOG00000000809	chd3	98	72.865	ENSCGRG00000007878	Chd3	55	83.070	Cricetulus_griseus_crigri
ENSXCOG00000000809	chd3	96	86.044	ENSCSEG00000004489	chd3	64	87.072	Cynoglossus_semilaevis
ENSXCOG00000000809	chd3	93	94.250	ENSCVAG00000007293	chd3	58	94.250	Cyprinodon_variegatus
ENSXCOG00000000809	chd3	93	87.656	ENSDARG00000021405	chd3	57	87.769	Danio_rerio
ENSXCOG00000000809	chd3	96	83.202	ENSDORG00000010713	Chd3	53	82.976	Dipodomys_ordii
ENSXCOG00000000809	chd3	96	75.480	ENSETEG00000017733	CHD3	53	75.085	Echinops_telfairi
ENSXCOG00000000809	chd3	85	82.976	ENSEASG00005019360	CHD3	50	91.892	Equus_asinus_asinus
ENSXCOG00000000809	chd3	85	82.976	ENSECAG00000010051	CHD3	50	91.892	Equus_caballus
ENSXCOG00000000809	chd3	95	76.384	ENSEEUG00000015205	CHD3	52	76.158	Erinaceus_europaeus
ENSXCOG00000000809	chd3	85	88.552	ENSELUG00000019499	chd3	62	88.018	Esox_lucius
ENSXCOG00000000809	chd3	90	76.099	ENSGMOG00000013599	chd3	50	84.592	Gadus_morhua
ENSXCOG00000000809	chd3	94	95.485	ENSGAFG00000004055	chd3	93	95.485	Gambusia_affinis
ENSXCOG00000000809	chd3	97	88.354	ENSGACG00000019275	chd3	54	87.122	Gasterosteus_aculeatus
ENSXCOG00000000809	chd3	79	83.390	ENSGAGG00000013164	CHD3	64	82.957	Gopherus_agassizii
ENSXCOG00000000809	chd3	96	83.089	ENSGGOG00000013496	CHD3	50	91.429	Gorilla_gorilla
ENSXCOG00000000809	chd3	96	82.976	ENSHGLG00000012017	CHD3	51	82.751	Heterocephalus_glaber_female
ENSXCOG00000000809	chd3	83	71.742	ENSHGLG00100013902	CHD3	55	70.581	Heterocephalus_glaber_male
ENSXCOG00000000809	chd3	97	88.704	ENSHCOG00000010170	chd3	56	87.708	Hippocampus_comes
ENSXCOG00000000809	chd3	85	88.664	ENSIPUG00000003271	chd3	61	82.071	Ictalurus_punctatus
ENSXCOG00000000809	chd3	96	83.089	ENSSTOG00000025907	CHD3	53	82.976	Ictidomys_tridecemlineatus
ENSXCOG00000000809	chd3	96	83.089	ENSJJAG00000017633	Chd3	53	82.864	Jaculus_jaculus
ENSXCOG00000000809	chd3	93	91.573	ENSKMAG00000019292	chd3	58	90.282	Kryptolebias_marmoratus
ENSXCOG00000000809	chd3	96	88.076	ENSLBEG00000028485	chd3	61	81.504	Labrus_bergylta
ENSXCOG00000000809	chd3	94	81.511	ENSLACG00000008031	CHD3	52	81.465	Latimeria_chalumnae
ENSXCOG00000000809	chd3	94	86.839	ENSLOCG00000013965	chd3	52	87.119	Lepisosteus_oculatus
ENSXCOG00000000809	chd3	98	72.925	ENSLAFG00000000572	CHD3	62	72.099	Loxodonta_africana
ENSXCOG00000000809	chd3	96	82.976	ENSMFAG00000020113	CHD3	51	91.429	Macaca_fascicularis
ENSXCOG00000000809	chd3	96	82.976	ENSMMUG00000022221	CHD3	52	82.751	Macaca_mulatta
ENSXCOG00000000809	chd3	96	82.976	ENSMNEG00000001728	CHD3	50	91.429	Macaca_nemestrina
ENSXCOG00000000809	chd3	96	82.976	ENSMLEG00000032249	CHD3	52	82.751	Mandrillus_leucophaeus
ENSXCOG00000000809	chd3	85	93.303	ENSMAMG00000000564	chd3	58	93.092	Mastacembelus_armatus
ENSXCOG00000000809	chd3	93	83.145	ENSMAUG00000013873	Chd3	50	93.333	Mesocricetus_auratus
ENSXCOG00000000809	chd3	96	83.202	ENSMICG00000008741	CHD3	50	78.002	Microcebus_murinus
ENSXCOG00000000809	chd3	93	83.183	ENSMOCG00000004848	Chd3	53	83.070	Microtus_ochrogaster
ENSXCOG00000000809	chd3	93	90.653	ENSMMOG00000012699	chd3	57	90.519	Mola_mola
ENSXCOG00000000809	chd3	82	91.892	ENSMODG00000007509	CHD3	51	91.892	Monodelphis_domestica
ENSXCOG00000000809	chd3	93	83.070	MGP_CAROLIEiJ_G0016564	Chd3	54	82.957	Mus_caroli
ENSXCOG00000000809	chd3	93	83.070	ENSMUSG00000018474	Chd3	54	82.957	Mus_musculus
ENSXCOG00000000809	chd3	96	83.070	MGP_PahariEiJ_G0017695	Chd3	54	82.957	Mus_pahari
ENSXCOG00000000809	chd3	93	83.070	MGP_SPRETEiJ_G0017400	Chd3	54	82.957	Mus_spretus
ENSXCOG00000000809	chd3	79	83.202	ENSMPUG00000008861	CHD3	52	82.976	Mustela_putorius_furo
ENSXCOG00000000809	chd3	96	83.108	ENSMLUG00000014643	-	51	82.883	Myotis_lucifugus
ENSXCOG00000000809	chd3	96	82.976	ENSNGAG00000000773	Chd3	51	82.751	Nannospalax_galili
ENSXCOG00000000809	chd3	88	85.756	ENSNBRG00000000636	chd3	63	85.659	Neolamprologus_brichardi
ENSXCOG00000000809	chd3	96	82.187	ENSNLEG00000009770	CHD3	53	81.962	Nomascus_leucogenys
ENSXCOG00000000809	chd3	89	81.962	ENSOPRG00000011069	CHD3	51	81.736	Ochotona_princeps
ENSXCOG00000000809	chd3	96	82.864	ENSODEG00000017785	CHD3	51	82.751	Octodon_degus
ENSXCOG00000000809	chd3	95	91.391	ENSONIG00000009292	chd3	57	90.066	Oreochromis_niloticus
ENSXCOG00000000809	chd3	96	81.982	ENSOCUG00000029299	CHD3	54	81.532	Oryctolagus_cuniculus
ENSXCOG00000000809	chd3	99	82.638	ENSORLG00000007107	chd3	71	82.638	Oryzias_latipes
ENSXCOG00000000809	chd3	92	85.108	ENSORLG00020008387	chd3	95	85.768	Oryzias_latipes_hni
ENSXCOG00000000809	chd3	84	92.605	ENSOMEG00000013691	chd3	58	91.648	Oryzias_melastigma
ENSXCOG00000000809	chd3	96	83.089	ENSOGAG00000003216	CHD3	51	82.864	Otolemur_garnettii
ENSXCOG00000000809	chd3	96	82.864	ENSOARG00000017855	CHD3	53	83.202	Ovis_aries
ENSXCOG00000000809	chd3	96	82.638	ENSPPAG00000032886	CHD3	50	91.429	Pan_paniscus
ENSXCOG00000000809	chd3	96	83.202	ENSPPRG00000000626	CHD3	52	82.976	Panthera_pardus
ENSXCOG00000000809	chd3	96	83.089	ENSPTRG00000008714	CHD3	50	91.429	Pan_troglodytes
ENSXCOG00000000809	chd3	96	82.976	ENSPANG00000023938	CHD3	51	91.429	Papio_anubis
ENSXCOG00000000809	chd3	88	95.247	ENSPKIG00000006305	chd3	55	95.247	Paramormyrops_kingsleyae
ENSXCOG00000000809	chd3	79	83.315	ENSPSIG00000010177	CHD3	79	83.089	Pelodiscus_sinensis
ENSXCOG00000000809	chd3	93	83.183	ENSPEMG00000014262	Chd3	51	83.070	Peromyscus_maniculatus_bairdii
ENSXCOG00000000809	chd3	93	82.525	ENSPCIG00000005442	CHD3	58	82.300	Phascolarctos_cinereus
ENSXCOG00000000809	chd3	99	94.872	ENSPFOG00000012464	chd3	56	94.872	Poecilia_formosa
ENSXCOG00000000809	chd3	95	93.785	ENSPLAG00000002887	chd3	95	93.785	Poecilia_latipinna
ENSXCOG00000000809	chd3	95	94.336	ENSPMEG00000016725	chd3	95	94.336	Poecilia_mexicana
ENSXCOG00000000809	chd3	98	96.618	ENSPREG00000011044	chd3	64	96.618	Poecilia_reticulata
ENSXCOG00000000809	chd3	94	80.383	ENSPPYG00000007940	CHD3	51	80.158	Pongo_abelii
ENSXCOG00000000809	chd3	96	83.202	ENSPCOG00000020952	CHD3	51	83.089	Propithecus_coquereli
ENSXCOG00000000809	chd3	94	88.401	ENSPNAG00000020393	chd3	58	88.176	Pygocentrus_nattereri
ENSXCOG00000000809	chd3	82	91.892	ENSRNOG00000009722	Chd3	50	91.892	Rattus_norvegicus
ENSXCOG00000000809	chd3	98	82.976	ENSRBIG00000033562	CHD3	50	91.429	Rhinopithecus_bieti
ENSXCOG00000000809	chd3	96	82.976	ENSRROG00000029554	CHD3	52	82.751	Rhinopithecus_roxellana
ENSXCOG00000000809	chd3	96	83.089	ENSSBOG00000020719	CHD3	50	91.429	Saimiri_boliviensis_boliviensis
ENSXCOG00000000809	chd3	96	82.525	ENSSHAG00000014412	CHD3	53	82.300	Sarcophilus_harrisii
ENSXCOG00000000809	chd3	79	89.053	ENSSFOG00015023123	chd3	50	89.053	Scleropages_formosus
ENSXCOG00000000809	chd3	85	92.221	ENSSMAG00000006451	chd3	59	92.221	Scophthalmus_maximus
ENSXCOG00000000809	chd3	89	87.634	ENSSDUG00000005792	chd3	96	87.439	Seriola_dumerili
ENSXCOG00000000809	chd3	97	92.067	ENSSPAG00000013694	chd3	61	92.117	Stegastes_partitus
ENSXCOG00000000809	chd3	96	83.089	ENSSSCG00000021363	CHD3	54	91.892	Sus_scrofa
ENSXCOG00000000809	chd3	93	91.377	ENSTRUG00000014990	chd3	65	90.146	Takifugu_rubripes
ENSXCOG00000000809	chd3	93	91.314	ENSTNIG00000012998	chd3	56	90.089	Tetraodon_nigroviridis
ENSXCOG00000000809	chd3	93	81.081	ENSUAMG00000005475	CHD3	50	91.429	Ursus_americanus
ENSXCOG00000000809	chd3	96	83.296	ENSVVUG00000028011	CHD3	50	83.296	Vulpes_vulpes
ENSXCOG00000000809	chd3	87	96.731	ENSXMAG00000016035	chd3	68	96.731	Xiphophorus_maculatus