EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000824 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5725 bases
Position: chrKQ557207.1:5093058-5098782
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001015	HAT	PF02184.16	2.5e-31	1	2
ENSXCOP00000001015	HAT	PF02184.16	2.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001028	-	2247	-	ENSXCOP00000001015	748 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000824	crnkl1	91	83.895	ENSG00000101343	CRNKL1	97	85.457	Homo_sapiens
ENSXCOG00000000824	crnkl1	96	89.679	ENSAPOG00000009705	crnkl1	97	93.750	Acanthochromis_polyacanthus
ENSXCOG00000000824	crnkl1	91	84.513	ENSAMEG00000000270	CRNKL1	80	86.357	Ailuropoda_melanoleuca
ENSXCOG00000000824	crnkl1	97	87.654	ENSACIG00000015267	crnkl1	100	85.209	Amphilophus_citrinellus
ENSXCOG00000000824	crnkl1	96	90.111	ENSAOCG00000021964	crnkl1	93	89.930	Amphiprion_ocellaris
ENSXCOG00000000824	crnkl1	96	90.210	ENSAPEG00000015041	crnkl1	94	89.930	Amphiprion_percula
ENSXCOG00000000824	crnkl1	96	88.750	ENSATEG00000001068	crnkl1	88	93.423	Anabas_testudineus
ENSXCOG00000000824	crnkl1	90	83.976	ENSAPLG00000013105	CRNKL1	97	84.708	Anas_platyrhynchos
ENSXCOG00000000824	crnkl1	92	84.402	ENSACAG00000005284	CRNKL1	98	85.714	Anolis_carolinensis
ENSXCOG00000000824	crnkl1	84	85.420	ENSANAG00000024889	CRNKL1	99	85.420	Aotus_nancymaae
ENSXCOG00000000824	crnkl1	100	85.059	ENSACLG00000010813	crnkl1	100	86.093	Astatotilapia_calliptera
ENSXCOG00000000824	crnkl1	93	87.966	ENSAMXG00000018334	crnkl1	90	90.120	Astyanax_mexicanus
ENSXCOG00000000824	crnkl1	92	84.448	ENSBTAG00000008472	CRNKL1	96	86.357	Bos_taurus
ENSXCOG00000000824	crnkl1	86	63.453	WBGene00019762	M03F8.3	88	63.691	Caenorhabditis_elegans
ENSXCOG00000000824	crnkl1	91	84.041	ENSCJAG00000005393	CRNKL1	97	85.607	Callithrix_jacchus
ENSXCOG00000000824	crnkl1	91	84.513	ENSCAFG00000005333	CRNKL1	91	86.357	Canis_familiaris
ENSXCOG00000000824	crnkl1	91	84.627	ENSCAFG00020027488	CRNKL1	97	86.357	Canis_lupus_dingo
ENSXCOG00000000824	crnkl1	92	84.884	ENSCHIG00000013171	CRNKL1	96	86.807	Capra_hircus
ENSXCOG00000000824	crnkl1	91	83.895	ENSTSYG00000004197	CRNKL1	97	85.457	Carlito_syrichta
ENSXCOG00000000824	crnkl1	85	82.468	ENSCAPG00000010501	CRNKL1	96	84.333	Cavia_aperea
ENSXCOG00000000824	crnkl1	91	83.602	ENSCPOG00000004418	CRNKL1	97	85.307	Cavia_porcellus
ENSXCOG00000000824	crnkl1	91	83.895	ENSCCAG00000027037	CRNKL1	97	85.457	Cebus_capucinus
ENSXCOG00000000824	crnkl1	91	83.776	ENSCATG00000034247	CRNKL1	97	85.307	Cercocebus_atys
ENSXCOG00000000824	crnkl1	91	83.895	ENSCLAG00000013859	CRNKL1	97	85.607	Chinchilla_lanigera
ENSXCOG00000000824	crnkl1	91	83.748	ENSCSAG00000011434	CRNKL1	97	85.307	Chlorocebus_sabaeus
ENSXCOG00000000824	crnkl1	91	83.776	ENSCHOG00000006371	CRNKL1	81	85.607	Choloepus_hoffmanni
ENSXCOG00000000824	crnkl1	90	85.926	ENSCPBG00000023501	CRNKL1	98	86.012	Chrysemys_picta_bellii
ENSXCOG00000000824	crnkl1	89	67.820	ENSCING00000002709	-	97	67.820	Ciona_intestinalis
ENSXCOG00000000824	crnkl1	91	83.748	ENSCANG00000038789	CRNKL1	97	85.307	Colobus_angolensis_palliatus
ENSXCOG00000000824	crnkl1	91	83.895	ENSCGRG00001001115	-	97	85.607	Cricetulus_griseus_chok1gshd
ENSXCOG00000000824	crnkl1	91	83.895	ENSCGRG00001000687	-	97	85.607	Cricetulus_griseus_chok1gshd
ENSXCOG00000000824	crnkl1	91	83.895	ENSCGRG00000007854	Crnkl1	97	85.607	Cricetulus_griseus_crigri
ENSXCOG00000000824	crnkl1	99	81.679	ENSCSEG00000005594	crnkl1	85	91.964	Cynoglossus_semilaevis
ENSXCOG00000000824	crnkl1	89	95.815	ENSCVAG00000015172	crnkl1	100	89.481	Cyprinodon_variegatus
ENSXCOG00000000824	crnkl1	96	85.576	ENSDARG00000007901	crnkl1	89	89.435	Danio_rerio
ENSXCOG00000000824	crnkl1	92	83.745	ENSDNOG00000016226	CRNKL1	92	86.057	Dasypus_novemcinctus
ENSXCOG00000000824	crnkl1	90	77.976	ENSDORG00000030174	-	99	77.976	Dipodomys_ordii
ENSXCOG00000000824	crnkl1	91	82.558	ENSDORG00000000394	-	97	84.226	Dipodomys_ordii
ENSXCOG00000000824	crnkl1	89	78.657	ENSDORG00000023724	-	99	78.657	Dipodomys_ordii
ENSXCOG00000000824	crnkl1	88	68.366	FBgn0000377	crn	95	68.366	Drosophila_melanogaster
ENSXCOG00000000824	crnkl1	91	73.939	ENSETEG00000003711	CRNKL1	81	75.262	Echinops_telfairi
ENSXCOG00000000824	crnkl1	90	62.295	ENSEBUG00000013461	crnkl1	94	58.420	Eptatretus_burgeri
ENSXCOG00000000824	crnkl1	91	84.627	ENSEASG00005002072	CRNKL1	97	86.357	Equus_asinus_asinus
ENSXCOG00000000824	crnkl1	91	84.627	ENSECAG00000022215	CRNKL1	97	86.357	Equus_caballus
ENSXCOG00000000824	crnkl1	91	81.416	ENSEEUG00000000413	CRNKL1	90	83.208	Erinaceus_europaeus
ENSXCOG00000000824	crnkl1	89	88.473	ENSELUG00000015424	crnkl1	95	88.095	Esox_lucius
ENSXCOG00000000824	crnkl1	91	84.627	ENSFCAG00000000714	CRNKL1	97	86.357	Felis_catus
ENSXCOG00000000824	crnkl1	87	85.911	ENSFALG00000004611	CRNKL1	97	85.911	Ficedula_albicollis
ENSXCOG00000000824	crnkl1	92	83.599	ENSFDAG00000000604	CRNKL1	97	85.907	Fukomys_damarensis
ENSXCOG00000000824	crnkl1	100	86.346	ENSFHEG00000013163	crnkl1	97	88.904	Fundulus_heteroclitus
ENSXCOG00000000824	crnkl1	89	90.120	ENSGMOG00000007609	crnkl1	93	89.881	Gadus_morhua
ENSXCOG00000000824	crnkl1	89	86.078	ENSGALG00000008429	CRNKL1	97	86.078	Gallus_gallus
ENSXCOG00000000824	crnkl1	100	97.196	ENSGAFG00000014249	crnkl1	97	97.196	Gambusia_affinis
ENSXCOG00000000824	crnkl1	100	85.411	ENSGACG00000011852	crnkl1	90	91.518	Gasterosteus_aculeatus
ENSXCOG00000000824	crnkl1	86	85.581	ENSGAGG00000021233	CRNKL1	98	85.670	Gopherus_agassizii
ENSXCOG00000000824	crnkl1	91	83.895	ENSGGOG00000014176	CRNKL1	97	85.457	Gorilla_gorilla
ENSXCOG00000000824	crnkl1	100	85.359	ENSHBUG00000005246	crnkl1	100	85.337	Haplochromis_burtoni
ENSXCOG00000000824	crnkl1	90	84.911	ENSHGLG00000010856	CRNKL1	97	85.907	Heterocephalus_glaber_female
ENSXCOG00000000824	crnkl1	90	84.911	ENSHGLG00100011521	CRNKL1	97	85.907	Heterocephalus_glaber_male
ENSXCOG00000000824	crnkl1	90	89.568	ENSHCOG00000006420	crnkl1	97	89.599	Hippocampus_comes
ENSXCOG00000000824	crnkl1	85	69.231	ENSIPUG00000000315	-	99	70.440	Ictalurus_punctatus
ENSXCOG00000000824	crnkl1	91	74.963	ENSIPUG00000006836	-	98	75.373	Ictalurus_punctatus
ENSXCOG00000000824	crnkl1	87	89.214	ENSIPUG00000006751	crnkl1	90	89.247	Ictalurus_punctatus
ENSXCOG00000000824	crnkl1	91	84.334	ENSSTOG00000014747	CRNKL1	97	86.057	Ictidomys_tridecemlineatus
ENSXCOG00000000824	crnkl1	91	82.665	ENSJJAG00000016926	Crnkl1	97	84.311	Jaculus_jaculus
ENSXCOG00000000824	crnkl1	97	88.705	ENSKMAG00000003620	crnkl1	86	93.294	Kryptolebias_marmoratus
ENSXCOG00000000824	crnkl1	89	75.519	ENSLBEG00000003543	crnkl1	89	75.259	Labrus_bergylta
ENSXCOG00000000824	crnkl1	91	85.965	ENSLACG00000001129	CRNKL1	98	86.736	Latimeria_chalumnae
ENSXCOG00000000824	crnkl1	90	89.254	ENSLOCG00000016889	crnkl1	93	88.988	Lepisosteus_oculatus
ENSXCOG00000000824	crnkl1	91	83.626	ENSLAFG00000004512	CRNKL1	97	86.078	Loxodonta_africana
ENSXCOG00000000824	crnkl1	91	83.748	ENSMFAG00000039893	CRNKL1	97	85.307	Macaca_fascicularis
ENSXCOG00000000824	crnkl1	91	83.748	ENSMMUG00000007709	CRNKL1	97	85.307	Macaca_mulatta
ENSXCOG00000000824	crnkl1	91	83.748	ENSMNEG00000037490	CRNKL1	97	85.307	Macaca_nemestrina
ENSXCOG00000000824	crnkl1	91	83.748	ENSMLEG00000034885	CRNKL1	97	85.307	Mandrillus_leucophaeus
ENSXCOG00000000824	crnkl1	95	89.266	ENSMAMG00000008757	crnkl1	89	92.560	Mastacembelus_armatus
ENSXCOG00000000824	crnkl1	100	86.334	ENSMZEG00005022345	crnkl1	100	86.189	Maylandia_zebra
ENSXCOG00000000824	crnkl1	90	85.185	ENSMGAG00000003452	CRNKL1	92	85.928	Meleagris_gallopavo
ENSXCOG00000000824	crnkl1	91	83.895	ENSMAUG00000020764	Crnkl1	97	85.607	Mesocricetus_auratus
ENSXCOG00000000824	crnkl1	91	83.748	ENSMICG00000006048	CRNKL1	97	85.457	Microcebus_murinus
ENSXCOG00000000824	crnkl1	91	76.547	ENSMOCG00000000681	-	96	78.056	Microtus_ochrogaster
ENSXCOG00000000824	crnkl1	89	61.203	ENSMOCG00000004179	-	95	61.286	Microtus_ochrogaster
ENSXCOG00000000824	crnkl1	84	90.823	ENSMMOG00000017601	crnkl1	97	90.823	Mola_mola
ENSXCOG00000000824	crnkl1	92	78.457	ENSMODG00000010857	-	97	79.732	Monodelphis_domestica
ENSXCOG00000000824	crnkl1	91	82.200	ENSMODG00000005961	-	97	83.358	Monodelphis_domestica
ENSXCOG00000000824	crnkl1	95	62.709	ENSMALG00000011211	crnkl1	88	67.262	Monopterus_albus
ENSXCOG00000000824	crnkl1	91	84.334	MGP_CAROLIEiJ_G0024394	Crnkl1	97	85.907	Mus_caroli
ENSXCOG00000000824	crnkl1	91	84.187	ENSMUSG00000001767	Crnkl1	97	85.907	Mus_musculus
ENSXCOG00000000824	crnkl1	91	83.309	MGP_PahariEiJ_G0025838	Crnkl1	97	85.007	Mus_pahari
ENSXCOG00000000824	crnkl1	91	84.187	MGP_SPRETEiJ_G0025312	Crnkl1	97	85.907	Mus_spretus
ENSXCOG00000000824	crnkl1	91	84.627	ENSMPUG00000001226	CRNKL1	97	86.357	Mustela_putorius_furo
ENSXCOG00000000824	crnkl1	91	84.218	ENSMLUG00000016513	CRNKL1	86	86.057	Myotis_lucifugus
ENSXCOG00000000824	crnkl1	91	82.014	ENSNGAG00000023097	Crnkl1	97	83.652	Nannospalax_galili
ENSXCOG00000000824	crnkl1	96	87.654	ENSNBRG00000007867	crnkl1	100	85.395	Neolamprologus_brichardi
ENSXCOG00000000824	crnkl1	91	81.991	ENSNLEG00000009862	CRNKL1	97	83.508	Nomascus_leucogenys
ENSXCOG00000000824	crnkl1	89	84.731	ENSMEUG00000012167	-	98	85.976	Notamacropus_eugenii
ENSXCOG00000000824	crnkl1	91	79.678	ENSMEUG00000002361	-	97	80.506	Notamacropus_eugenii
ENSXCOG00000000824	crnkl1	79	58.801	ENSOPRG00000009242	-	61	58.801	Ochotona_princeps
ENSXCOG00000000824	crnkl1	91	83.748	ENSODEG00000012175	CRNKL1	97	85.457	Octodon_degus
ENSXCOG00000000824	crnkl1	97	87.500	ENSONIG00000018728	crnkl1	88	93.124	Oreochromis_niloticus
ENSXCOG00000000824	crnkl1	91	83.407	ENSOCUG00000015484	CRNKL1	80	85.800	Oryctolagus_cuniculus
ENSXCOG00000000824	crnkl1	96	86.130	ENSORLG00000017240	crnkl1	94	87.611	Oryzias_latipes
ENSXCOG00000000824	crnkl1	96	86.188	ENSORLG00020001742	crnkl1	90	90.327	Oryzias_latipes_hni
ENSXCOG00000000824	crnkl1	96	86.307	ENSORLG00015019564	crnkl1	90	90.476	Oryzias_latipes_hsok
ENSXCOG00000000824	crnkl1	96	86.878	ENSOMEG00000019895	crnkl1	90	91.071	Oryzias_melastigma
ENSXCOG00000000824	crnkl1	92	83.673	ENSOGAG00000011544	CRNKL1	97	85.607	Otolemur_garnettii
ENSXCOG00000000824	crnkl1	91	84.480	ENSOARG00000002150	CRNKL1	87	86.507	Ovis_aries
ENSXCOG00000000824	crnkl1	91	83.776	ENSPPAG00000027847	CRNKL1	81	85.457	Pan_paniscus
ENSXCOG00000000824	crnkl1	91	84.627	ENSPPRG00000001955	CRNKL1	97	86.357	Panthera_pardus
ENSXCOG00000000824	crnkl1	91	84.627	ENSPTIG00000007393	CRNKL1	97	86.357	Panthera_tigris_altaica
ENSXCOG00000000824	crnkl1	91	83.895	ENSPTRG00000030609	CRNKL1	97	85.457	Pan_troglodytes
ENSXCOG00000000824	crnkl1	91	83.748	ENSPANG00000017420	CRNKL1	97	85.307	Papio_anubis
ENSXCOG00000000824	crnkl1	89	86.637	ENSPKIG00000017093	crnkl1	88	86.053	Paramormyrops_kingsleyae
ENSXCOG00000000824	crnkl1	90	84.375	ENSPSIG00000012705	CRNKL1	97	84.454	Pelodiscus_sinensis
ENSXCOG00000000824	crnkl1	92	83.647	ENSPMGG00000006263	crnkl1	95	84.673	Periophthalmus_magnuspinnatus
ENSXCOG00000000824	crnkl1	91	84.187	ENSPEMG00000000073	-	96	85.907	Peromyscus_maniculatus_bairdii
ENSXCOG00000000824	crnkl1	92	81.752	ENSPMAG00000002250	crnkl1	97	82.887	Petromyzon_marinus
ENSXCOG00000000824	crnkl1	91	84.211	ENSPCIG00000025825	CRNKL1	94	85.395	Phascolarctos_cinereus
ENSXCOG00000000824	crnkl1	100	96.658	ENSPFOG00000005102	crnkl1	100	96.658	Poecilia_formosa
ENSXCOG00000000824	crnkl1	99	96.635	ENSPLAG00000007288	crnkl1	96	96.635	Poecilia_latipinna
ENSXCOG00000000824	crnkl1	100	96.904	ENSPMEG00000008865	crnkl1	99	96.904	Poecilia_mexicana
ENSXCOG00000000824	crnkl1	100	96.000	ENSPREG00000012615	crnkl1	100	96.000	Poecilia_reticulata
ENSXCOG00000000824	crnkl1	91	83.628	ENSPPYG00000010747	CRNKL1	79	85.307	Pongo_abelii
ENSXCOG00000000824	crnkl1	91	79.204	ENSPCAG00000003296	CRNKL1	83	80.960	Procavia_capensis
ENSXCOG00000000824	crnkl1	91	82.743	ENSPCOG00000017608	CRNKL1	81	84.558	Propithecus_coquereli
ENSXCOG00000000824	crnkl1	91	84.366	ENSPVAG00000006207	CRNKL1	81	86.207	Pteropus_vampyrus
ENSXCOG00000000824	crnkl1	100	84.686	ENSPNYG00000001977	crnkl1	100	85.582	Pundamilia_nyererei
ENSXCOG00000000824	crnkl1	94	87.376	ENSPNAG00000001507	crnkl1	96	86.181	Pygocentrus_nattereri
ENSXCOG00000000824	crnkl1	91	84.041	ENSRNOG00000040045	Crnkl1	97	85.757	Rattus_norvegicus
ENSXCOG00000000824	crnkl1	91	84.187	ENSRNOG00000010587	Crnkl1	97	85.907	Rattus_norvegicus
ENSXCOG00000000824	crnkl1	91	83.748	ENSRBIG00000031770	CRNKL1	97	85.307	Rhinopithecus_bieti
ENSXCOG00000000824	crnkl1	91	83.602	ENSRROG00000040450	CRNKL1	97	85.157	Rhinopithecus_roxellana
ENSXCOG00000000824	crnkl1	87	36.850	YLR117C	CLF1	99	36.850	Saccharomyces_cerevisiae
ENSXCOG00000000824	crnkl1	91	84.041	ENSSBOG00000029672	CRNKL1	97	85.607	Saimiri_boliviensis_boliviensis
ENSXCOG00000000824	crnkl1	88	68.997	ENSSHAG00000011199	CRNKL1	99	68.684	Sarcophilus_harrisii
ENSXCOG00000000824	crnkl1	89	88.855	ENSSFOG00015000946	crnkl1	87	88.772	Scleropages_formosus
ENSXCOG00000000824	crnkl1	98	86.703	ENSSMAG00000007933	crnkl1	87	92.125	Scophthalmus_maximus
ENSXCOG00000000824	crnkl1	96	83.636	ENSSDUG00000012625	crnkl1	86	87.332	Seriola_dumerili
ENSXCOG00000000824	crnkl1	97	87.772	ENSSLDG00000021413	crnkl1	87	93.145	Seriola_lalandi_dorsalis
ENSXCOG00000000824	crnkl1	91	83.748	ENSSARG00000006443	CRNKL1	80	85.457	Sorex_araneus
ENSXCOG00000000824	crnkl1	91	84.503	ENSSPUG00000005254	CRNKL1	97	86.228	Sphenodon_punctatus
ENSXCOG00000000824	crnkl1	96	89.650	ENSSPAG00000016150	crnkl1	86	93.713	Stegastes_partitus
ENSXCOG00000000824	crnkl1	92	84.157	ENSSSCG00000038587	CRNKL1	96	86.357	Sus_scrofa
ENSXCOG00000000824	crnkl1	89	86.078	ENSTGUG00000007645	CRNKL1	96	86.078	Taeniopygia_guttata
ENSXCOG00000000824	crnkl1	95	82.203	ENSTRUG00000015417	crnkl1	89	85.268	Takifugu_rubripes
ENSXCOG00000000824	crnkl1	89	89.820	ENSTNIG00000010710	crnkl1	97	89.820	Tetraodon_nigroviridis
ENSXCOG00000000824	crnkl1	84	83.706	ENSTBEG00000001304	CRNKL1	82	83.835	Tupaia_belangeri
ENSXCOG00000000824	crnkl1	84	81.629	ENSTTRG00000000484	CRNKL1	81	81.775	Tursiops_truncatus
ENSXCOG00000000824	crnkl1	91	84.627	ENSUAMG00000018586	CRNKL1	97	86.357	Ursus_americanus
ENSXCOG00000000824	crnkl1	91	84.627	ENSUMAG00000024957	CRNKL1	97	86.357	Ursus_maritimus
ENSXCOG00000000824	crnkl1	91	84.513	ENSVVUG00000012559	CRNKL1	80	86.357	Vulpes_vulpes
ENSXCOG00000000824	crnkl1	90	86.095	ENSXETG00000009698	crnkl1	98	86.458	Xenopus_tropicalis
ENSXCOG00000000824	crnkl1	100	98.663	ENSXMAG00000006896	crnkl1	100	98.663	Xiphophorus_maculatus