EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000829 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3568 bases
Position: chrKQ557221.1:12274744-12278311
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001005	Sua5_yciO_yrdC	PF01300.18	1.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001017	-	711	-	ENSXCOP00000001005	236 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000829	yrdc	94	55.702	ENSG00000196449	YRDC	82	55.411	Homo_sapiens
ENSXCOG00000000829	yrdc	100	80.672	ENSAPOG00000024293	yrdc	91	80.672	Acanthochromis_polyacanthus
ENSXCOG00000000829	yrdc	75	60.656	ENSAMEG00000001173	YRDC	97	60.656	Ailuropoda_melanoleuca
ENSXCOG00000000829	yrdc	100	81.513	ENSACIG00000017330	yrdc	89	81.513	Amphilophus_citrinellus
ENSXCOG00000000829	yrdc	100	81.092	ENSAOCG00000021647	yrdc	91	81.092	Amphiprion_ocellaris
ENSXCOG00000000829	yrdc	100	80.672	ENSAPEG00000006164	yrdc	91	80.672	Amphiprion_percula
ENSXCOG00000000829	yrdc	99	78.481	ENSATEG00000010086	yrdc	89	78.481	Anabas_testudineus
ENSXCOG00000000829	yrdc	80	60.309	ENSACAG00000017203	YRDC	99	57.820	Anolis_carolinensis
ENSXCOG00000000829	yrdc	95	52.361	ENSANAG00000031052	-	84	52.361	Aotus_nancymaae
ENSXCOG00000000829	yrdc	83	58.911	ENSANAG00000028788	-	86	58.911	Aotus_nancymaae
ENSXCOG00000000829	yrdc	100	83.613	ENSACLG00000027775	yrdc	89	83.613	Astatotilapia_calliptera
ENSXCOG00000000829	yrdc	98	68.376	ENSAMXG00000037791	yrdc	89	68.376	Astyanax_mexicanus
ENSXCOG00000000829	yrdc	95	54.113	ENSBTAG00000006510	YRDC	83	56.277	Bos_taurus
ENSXCOG00000000829	yrdc	90	34.259	WBGene00012997	Y48C3A.18	98	34.259	Caenorhabditis_elegans
ENSXCOG00000000829	yrdc	95	55.411	ENSCJAG00000002078	YRDC	63	55.411	Callithrix_jacchus
ENSXCOG00000000829	yrdc	97	54.043	ENSCAFG00000003253	YRDC	85	54.043	Canis_familiaris
ENSXCOG00000000829	yrdc	94	55.459	ENSCAFG00020007843	YRDC	83	55.459	Canis_lupus_dingo
ENSXCOG00000000829	yrdc	95	54.978	ENSCHIG00000007882	YRDC	83	54.978	Capra_hircus
ENSXCOG00000000829	yrdc	69	60.000	ENSTSYG00000005555	YRDC	61	60.000	Carlito_syrichta
ENSXCOG00000000829	yrdc	95	57.576	ENSCPOG00000036144	YRDC	82	57.576	Cavia_porcellus
ENSXCOG00000000829	yrdc	95	55.411	ENSCCAG00000028891	YRDC	82	55.411	Cebus_capucinus
ENSXCOG00000000829	yrdc	94	53.509	ENSCATG00000036928	YRDC	82	54.545	Cercocebus_atys
ENSXCOG00000000829	yrdc	79	61.979	ENSCLAG00000015012	YRDC	82	55.844	Chinchilla_lanigera
ENSXCOG00000000829	yrdc	94	53.509	ENSCSAG00000001116	YRDC	82	54.545	Chlorocebus_sabaeus
ENSXCOG00000000829	yrdc	70	55.357	ENSCHOG00000005500	YRDC	78	55.357	Choloepus_hoffmanni
ENSXCOG00000000829	yrdc	90	61.468	ENSCPBG00000018446	YRDC	90	61.468	Chrysemys_picta_bellii
ENSXCOG00000000829	yrdc	84	48.585	ENSCING00000007564	-	98	48.585	Ciona_intestinalis
ENSXCOG00000000829	yrdc	84	47.867	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
ENSXCOG00000000829	yrdc	94	53.947	ENSCANG00000031111	YRDC	82	54.978	Colobus_angolensis_palliatus
ENSXCOG00000000829	yrdc	94	55.702	ENSCGRG00001014496	-	82	55.411	Cricetulus_griseus_chok1gshd
ENSXCOG00000000829	yrdc	94	50.439	ENSCGRG00001000829	-	63	50.216	Cricetulus_griseus_chok1gshd
ENSXCOG00000000829	yrdc	91	78.241	ENSCSEG00000019075	yrdc	79	78.241	Cynoglossus_semilaevis
ENSXCOG00000000829	yrdc	100	84.874	ENSCVAG00000017355	yrdc	90	84.874	Cyprinodon_variegatus
ENSXCOG00000000829	yrdc	98	67.094	ENSDARG00000041428	yrdc	98	67.094	Danio_rerio
ENSXCOG00000000829	yrdc	79	44.086	ENSDNOG00000036198	-	94	44.086	Dasypus_novemcinctus
ENSXCOG00000000829	yrdc	94	53.509	ENSDNOG00000038789	-	83	53.023	Dasypus_novemcinctus
ENSXCOG00000000829	yrdc	78	61.905	ENSDORG00000008788	Yrdc	84	61.905	Dipodomys_ordii
ENSXCOG00000000829	yrdc	86	45.933	FBgn0061361	CG33786	84	45.933	Drosophila_melanogaster
ENSXCOG00000000829	yrdc	95	42.857	ENSETEG00000003442	YRDC	82	42.857	Echinops_telfairi
ENSXCOG00000000829	yrdc	94	48.889	ENSEBUG00000014080	yrdc	95	48.889	Eptatretus_burgeri
ENSXCOG00000000829	yrdc	84	60.000	ENSEASG00005012253	YRDC	82	55.844	Equus_asinus_asinus
ENSXCOG00000000829	yrdc	94	56.579	ENSECAG00000022522	YRDC	82	56.277	Equus_caballus
ENSXCOG00000000829	yrdc	100	70.248	ENSELUG00000018071	yrdc	80	70.248	Esox_lucius
ENSXCOG00000000829	yrdc	94	55.263	ENSFCAG00000011018	YRDC	82	54.978	Felis_catus
ENSXCOG00000000829	yrdc	80	62.887	ENSFALG00000000964	YRDC	90	62.437	Ficedula_albicollis
ENSXCOG00000000829	yrdc	100	85.294	ENSFHEG00000001029	yrdc	87	85.648	Fundulus_heteroclitus
ENSXCOG00000000829	yrdc	86	76.585	ENSGMOG00000015635	yrdc	99	76.585	Gadus_morhua
ENSXCOG00000000829	yrdc	86	60.766	ENSGALG00000029001	YRDC	82	60.766	Gallus_gallus
ENSXCOG00000000829	yrdc	100	94.538	ENSGAFG00000008396	yrdc	89	94.538	Gambusia_affinis
ENSXCOG00000000829	yrdc	98	75.527	ENSGACG00000013878	yrdc	98	75.527	Gasterosteus_aculeatus
ENSXCOG00000000829	yrdc	85	63.107	ENSGAGG00000014968	YRDC	89	63.107	Gopherus_agassizii
ENSXCOG00000000829	yrdc	94	55.702	ENSGGOG00000007619	YRDC	82	55.411	Gorilla_gorilla
ENSXCOG00000000829	yrdc	100	82.773	ENSHBUG00000009298	yrdc	89	82.773	Haplochromis_burtoni
ENSXCOG00000000829	yrdc	95	56.277	ENSHGLG00000014075	YRDC	82	56.277	Heterocephalus_glaber_female
ENSXCOG00000000829	yrdc	83	60.396	ENSHGLG00100002734	YRDC	73	60.396	Heterocephalus_glaber_male
ENSXCOG00000000829	yrdc	97	68.966	ENSHCOG00000006598	yrdc	91	68.966	Hippocampus_comes
ENSXCOG00000000829	yrdc	99	69.362	ENSIPUG00000014985	yrdc	97	69.362	Ictalurus_punctatus
ENSXCOG00000000829	yrdc	95	55.844	ENSSTOG00000001643	YRDC	82	55.844	Ictidomys_tridecemlineatus
ENSXCOG00000000829	yrdc	100	83.193	ENSKMAG00000013468	yrdc	89	83.193	Kryptolebias_marmoratus
ENSXCOG00000000829	yrdc	99	81.857	ENSLBEG00000027501	yrdc	89	81.857	Labrus_bergylta
ENSXCOG00000000829	yrdc	86	63.462	ENSLACG00000010689	YRDC	94	64.216	Latimeria_chalumnae
ENSXCOG00000000829	yrdc	97	65.254	ENSLOCG00000003321	yrdc	97	65.254	Lepisosteus_oculatus
ENSXCOG00000000829	yrdc	95	54.978	ENSLAFG00000017556	YRDC	82	54.978	Loxodonta_africana
ENSXCOG00000000829	yrdc	84	56.863	ENSMFAG00000003487	YRDC	96	58.333	Macaca_fascicularis
ENSXCOG00000000829	yrdc	94	53.509	ENSMMUG00000005372	YRDC	61	54.545	Macaca_mulatta
ENSXCOG00000000829	yrdc	94	53.509	ENSMNEG00000029348	YRDC	82	54.545	Macaca_nemestrina
ENSXCOG00000000829	yrdc	58	60.140	ENSMLEG00000041122	YRDC	95	62.238	Mandrillus_leucophaeus
ENSXCOG00000000829	yrdc	99	79.079	ENSMAMG00000007315	yrdc	89	79.079	Mastacembelus_armatus
ENSXCOG00000000829	yrdc	100	83.613	ENSMZEG00005006948	yrdc	89	83.613	Maylandia_zebra
ENSXCOG00000000829	yrdc	81	63.131	ENSMGAG00000002833	YRDC	97	63.131	Meleagris_gallopavo
ENSXCOG00000000829	yrdc	94	53.947	ENSMICG00000031688	YRDC	82	55.844	Microcebus_murinus
ENSXCOG00000000829	yrdc	69	52.761	ENSMOCG00000000164	-	64	52.410	Microtus_ochrogaster
ENSXCOG00000000829	yrdc	100	78.992	ENSMMOG00000002119	yrdc	89	78.992	Mola_mola
ENSXCOG00000000829	yrdc	84	59.512	ENSMODG00000017750	YRDC	73	59.512	Monodelphis_domestica
ENSXCOG00000000829	yrdc	97	80.087	ENSMALG00000012471	yrdc	87	80.087	Monopterus_albus
ENSXCOG00000000829	yrdc	89	55.814	MGP_CAROLIEiJ_G0026453	Yrdc	98	64.078	Mus_caroli
ENSXCOG00000000829	yrdc	95	55.411	ENSMUSG00000028889	Yrdc	100	64.762	Mus_musculus
ENSXCOG00000000829	yrdc	95	56.277	MGP_PahariEiJ_G0028784	Yrdc	100	64.762	Mus_pahari
ENSXCOG00000000829	yrdc	95	55.411	MGP_SPRETEiJ_G0027432	Yrdc	82	55.411	Mus_spretus
ENSXCOG00000000829	yrdc	83	58.911	ENSMPUG00000014542	YRDC	81	58.911	Mustela_putorius_furo
ENSXCOG00000000829	yrdc	84	49.510	ENSMLUG00000028796	-	73	49.510	Myotis_lucifugus
ENSXCOG00000000829	yrdc	81	57.360	ENSMLUG00000024310	-	97	57.360	Myotis_lucifugus
ENSXCOG00000000829	yrdc	95	55.844	ENSMLUG00000000955	-	82	55.844	Myotis_lucifugus
ENSXCOG00000000829	yrdc	84	59.512	ENSNGAG00000019099	Yrdc	73	59.512	Nannospalax_galili
ENSXCOG00000000829	yrdc	99	82.979	ENSNBRG00000009475	yrdc	88	82.979	Neolamprologus_brichardi
ENSXCOG00000000829	yrdc	94	55.702	ENSNLEG00000011665	YRDC	82	55.411	Nomascus_leucogenys
ENSXCOG00000000829	yrdc	84	60.488	ENSMEUG00000005068	YRDC	95	60.488	Notamacropus_eugenii
ENSXCOG00000000829	yrdc	94	56.579	ENSODEG00000007401	YRDC	100	63.810	Octodon_degus
ENSXCOG00000000829	yrdc	100	84.034	ENSONIG00000016213	yrdc	100	84.034	Oreochromis_niloticus
ENSXCOG00000000829	yrdc	95	55.844	ENSOCUG00000005384	YRDC	79	55.556	Oryctolagus_cuniculus
ENSXCOG00000000829	yrdc	100	78.838	ENSORLG00000014393	yrdc	91	78.838	Oryzias_latipes
ENSXCOG00000000829	yrdc	100	79.079	ENSORLG00020019663	yrdc	91	79.079	Oryzias_latipes_hni
ENSXCOG00000000829	yrdc	100	78.661	ENSORLG00015004625	yrdc	91	78.661	Oryzias_latipes_hsok
ENSXCOG00000000829	yrdc	100	78.992	ENSOMEG00000018550	yrdc	91	78.992	Oryzias_melastigma
ENSXCOG00000000829	yrdc	95	54.978	ENSOGAG00000030474	YRDC	83	54.978	Otolemur_garnettii
ENSXCOG00000000829	yrdc	95	54.978	ENSOARG00000019873	YRDC	82	54.978	Ovis_aries
ENSXCOG00000000829	yrdc	57	63.830	ENSPPAG00000039722	-	95	63.830	Pan_paniscus
ENSXCOG00000000829	yrdc	94	55.263	ENSPPRG00000007752	YRDC	82	54.978	Panthera_pardus
ENSXCOG00000000829	yrdc	94	44.351	ENSPTIG00000019821	YRDC	96	44.351	Panthera_tigris_altaica
ENSXCOG00000000829	yrdc	94	55.702	ENSPTRG00000000557	YRDC	82	55.411	Pan_troglodytes
ENSXCOG00000000829	yrdc	94	53.509	ENSPANG00000006487	YRDC	62	54.545	Papio_anubis
ENSXCOG00000000829	yrdc	97	69.231	ENSPKIG00000004574	yrdc	85	69.231	Paramormyrops_kingsleyae
ENSXCOG00000000829	yrdc	84	61.463	ENSPSIG00000006483	YRDC	72	61.463	Pelodiscus_sinensis
ENSXCOG00000000829	yrdc	98	74.468	ENSPMGG00000004184	yrdc	91	74.468	Periophthalmus_magnuspinnatus
ENSXCOG00000000829	yrdc	70	59.302	ENSPEMG00000016985	Yrdc	75	59.302	Peromyscus_maniculatus_bairdii
ENSXCOG00000000829	yrdc	72	54.237	ENSPMAG00000002905	yrdc	96	54.237	Petromyzon_marinus
ENSXCOG00000000829	yrdc	84	59.024	ENSPCIG00000025731	YRDC	73	59.024	Phascolarctos_cinereus
ENSXCOG00000000829	yrdc	100	93.697	ENSPFOG00000023097	yrdc	89	93.697	Poecilia_formosa
ENSXCOG00000000829	yrdc	100	93.277	ENSPLAG00000020882	yrdc	89	93.277	Poecilia_latipinna
ENSXCOG00000000829	yrdc	99	93.644	ENSPMEG00000013237	yrdc	89	93.644	Poecilia_mexicana
ENSXCOG00000000829	yrdc	100	93.697	ENSPREG00000005285	yrdc	89	93.697	Poecilia_reticulata
ENSXCOG00000000829	yrdc	84	59.314	ENSPPYG00000001523	-	84	59.314	Pongo_abelii
ENSXCOG00000000829	yrdc	97	54.894	ENSPCAG00000016850	YRDC	83	54.894	Procavia_capensis
ENSXCOG00000000829	yrdc	94	56.140	ENSPCOG00000013214	YRDC	82	55.844	Propithecus_coquereli
ENSXCOG00000000829	yrdc	95	55.411	ENSPVAG00000010147	YRDC	82	55.411	Pteropus_vampyrus
ENSXCOG00000000829	yrdc	100	83.193	ENSPNYG00000013956	yrdc	89	83.193	Pundamilia_nyererei
ENSXCOG00000000829	yrdc	90	72.558	ENSPNAG00000015625	yrdc	89	72.558	Pygocentrus_nattereri
ENSXCOG00000000829	yrdc	94	55.507	ENSRNOG00000025424	Yrdc	82	54.978	Rattus_norvegicus
ENSXCOG00000000829	yrdc	94	55.263	ENSRBIG00000032289	YRDC	82	54.978	Rhinopithecus_bieti
ENSXCOG00000000829	yrdc	92	53.070	ENSRROG00000039370	YRDC	78	54.386	Rhinopithecus_roxellana
ENSXCOG00000000829	yrdc	81	59.898	ENSSBOG00000018937	YRDC	84	59.898	Saimiri_boliviensis_boliviensis
ENSXCOG00000000829	yrdc	58	61.806	ENSSHAG00000013957	-	97	61.806	Sarcophilus_harrisii
ENSXCOG00000000829	yrdc	90	66.972	ENSSFOG00015006128	yrdc	94	66.972	Scleropages_formosus
ENSXCOG00000000829	yrdc	99	79.747	ENSSMAG00000005195	yrdc	90	79.747	Scophthalmus_maximus
ENSXCOG00000000829	yrdc	59	30.323	ENSSDUG00000006736	-	77	30.323	Seriola_dumerili
ENSXCOG00000000829	yrdc	99	81.702	ENSSDUG00000009775	yrdc	88	81.702	Seriola_dumerili
ENSXCOG00000000829	yrdc	99	81.702	ENSSLDG00000003196	yrdc	88	81.702	Seriola_lalandi_dorsalis
ENSXCOG00000000829	yrdc	89	59.447	ENSSPUG00000003946	YRDC	84	59.447	Sphenodon_punctatus
ENSXCOG00000000829	yrdc	100	80.672	ENSSPAG00000012559	yrdc	90	80.672	Stegastes_partitus
ENSXCOG00000000829	yrdc	94	56.140	ENSSSCG00000040425	YRDC	82	55.844	Sus_scrofa
ENSXCOG00000000829	yrdc	60	63.946	ENSTGUG00000001507	YRDC	100	63.946	Taeniopygia_guttata
ENSXCOG00000000829	yrdc	99	71.250	ENSTRUG00000005923	yrdc	89	71.667	Takifugu_rubripes
ENSXCOG00000000829	yrdc	63	59.355	ENSTBEG00000008863	YRDC	99	59.355	Tupaia_belangeri
ENSXCOG00000000829	yrdc	57	64.539	ENSTTRG00000013538	-	95	64.539	Tursiops_truncatus
ENSXCOG00000000829	yrdc	82	60.804	ENSUAMG00000006150	YRDC	98	60.804	Ursus_americanus
ENSXCOG00000000829	yrdc	95	43.723	ENSVPAG00000006642	YRDC	97	43.723	Vicugna_pacos
ENSXCOG00000000829	yrdc	96	60.684	ENSXETG00000014420	yrdc	98	60.684	Xenopus_tropicalis
ENSXCOG00000000829	yrdc	100	97.059	ENSXMAG00000014606	yrdc	84	97.059	Xiphophorus_maculatus