EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000000855 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-10o6.2
Alias: -
Full Name: si:dkey-10o6.2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3566 bases
Position: chrKQ557212.1:25256033-25259598
Accession: ZDB-GENE-070705-284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001037	2OG-FeII_Oxy	PF03171.20	5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001050	-	939	-	ENSXCOP00000001037	312 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000855	si:dkey-10o6.2	83	76.062	ENSAPOG00000011678	si:dkey-10o6.2	90	76.062	Acanthochromis_polyacanthus
ENSXCOG00000000855	si:dkey-10o6.2	97	70.957	ENSACIG00000024115	si:dkey-10o6.2	96	70.957	Amphilophus_citrinellus
ENSXCOG00000000855	si:dkey-10o6.2	99	70.968	ENSACIG00000011675	-	99	70.968	Amphilophus_citrinellus
ENSXCOG00000000855	si:dkey-10o6.2	99	75.081	ENSAOCG00000013068	si:dkey-10o6.2	99	75.081	Amphiprion_ocellaris
ENSXCOG00000000855	si:dkey-10o6.2	99	74.757	ENSAPEG00000011246	si:dkey-10o6.2	99	74.757	Amphiprion_percula
ENSXCOG00000000855	si:dkey-10o6.2	100	68.269	ENSATEG00000021952	si:dkey-10o6.2	100	68.269	Anabas_testudineus
ENSXCOG00000000855	si:dkey-10o6.2	100	70.513	ENSATEG00000000030	si:dkey-10o6.2	100	70.513	Anabas_testudineus
ENSXCOG00000000855	si:dkey-10o6.2	100	72.756	ENSATEG00000021945	si:dkey-10o6.2	100	72.756	Anabas_testudineus
ENSXCOG00000000855	si:dkey-10o6.2	100	72.115	ENSACLG00000023011	si:dkey-10o6.2	100	72.115	Astatotilapia_calliptera
ENSXCOG00000000855	si:dkey-10o6.2	99	62.903	ENSAMXG00000021555	si:dkey-10o6.2	99	62.903	Astyanax_mexicanus
ENSXCOG00000000855	si:dkey-10o6.2	98	36.842	ENSCING00000016920	-	93	36.842	Ciona_intestinalis
ENSXCOG00000000855	si:dkey-10o6.2	90	38.542	ENSCING00000007255	-	86	38.542	Ciona_intestinalis
ENSXCOG00000000855	si:dkey-10o6.2	99	34.365	ENSCING00000012500	-	98	34.365	Ciona_intestinalis
ENSXCOG00000000855	si:dkey-10o6.2	91	38.276	ENSCING00000022311	-	88	38.276	Ciona_intestinalis
ENSXCOG00000000855	si:dkey-10o6.2	76	40.574	ENSCING00000011926	-	99	40.574	Ciona_intestinalis
ENSXCOG00000000855	si:dkey-10o6.2	98	35.843	ENSCSAVG00000004616	-	98	35.843	Ciona_savignyi
ENSXCOG00000000855	si:dkey-10o6.2	78	31.984	ENSCSAVG00000001337	-	99	31.984	Ciona_savignyi
ENSXCOG00000000855	si:dkey-10o6.2	50	39.157	ENSCSAVG00000001775	-	97	39.157	Ciona_savignyi
ENSXCOG00000000855	si:dkey-10o6.2	91	34.237	ENSCSAVG00000000201	-	87	34.237	Ciona_savignyi
ENSXCOG00000000855	si:dkey-10o6.2	100	63.141	ENSCSEG00000000927	si:dkey-10o6.2	100	63.141	Cynoglossus_semilaevis
ENSXCOG00000000855	si:dkey-10o6.2	99	63.987	ENSCSEG00000000918	si:dkey-10o6.2	99	63.987	Cynoglossus_semilaevis
ENSXCOG00000000855	si:dkey-10o6.2	100	80.769	ENSCVAG00000015074	si:dkey-10o6.2	100	80.769	Cyprinodon_variegatus
ENSXCOG00000000855	si:dkey-10o6.2	99	66.452	ENSDARG00000074628	si:dkey-10o6.2	88	66.452	Danio_rerio
ENSXCOG00000000855	si:dkey-10o6.2	90	32.056	FBgn0053093	CG33093	84	32.056	Drosophila_melanogaster
ENSXCOG00000000855	si:dkey-10o6.2	99	31.579	FBgn0053099	CG33099	93	31.579	Drosophila_melanogaster
ENSXCOG00000000855	si:dkey-10o6.2	99	67.628	ENSELUG00000003488	si:dkey-10o6.2	99	67.628	Esox_lucius
ENSXCOG00000000855	si:dkey-10o6.2	100	79.808	ENSFHEG00000019035	si:dkey-10o6.2	100	79.808	Fundulus_heteroclitus
ENSXCOG00000000855	si:dkey-10o6.2	97	62.295	ENSGMOG00000018989	si:dkey-10o6.2	100	62.295	Gadus_morhua
ENSXCOG00000000855	si:dkey-10o6.2	100	91.667	ENSGAFG00000006137	si:dkey-10o6.2	100	91.667	Gambusia_affinis
ENSXCOG00000000855	si:dkey-10o6.2	99	64.596	ENSGACG00000006806	si:dkey-10o6.2	99	64.596	Gasterosteus_aculeatus
ENSXCOG00000000855	si:dkey-10o6.2	100	71.795	ENSHBUG00000008853	si:dkey-10o6.2	100	71.795	Haplochromis_burtoni
ENSXCOG00000000855	si:dkey-10o6.2	100	67.732	ENSHCOG00000017626	si:dkey-10o6.2	100	67.732	Hippocampus_comes
ENSXCOG00000000855	si:dkey-10o6.2	99	64.744	ENSHCOG00000017671	-	99	64.744	Hippocampus_comes
ENSXCOG00000000855	si:dkey-10o6.2	99	62.379	ENSIPUG00000018879	si:dkey-10o6.2	90	62.541	Ictalurus_punctatus
ENSXCOG00000000855	si:dkey-10o6.2	99	62.903	ENSIPUG00000018911	-	99	62.903	Ictalurus_punctatus
ENSXCOG00000000855	si:dkey-10o6.2	99	66.238	ENSKMAG00000006197	si:dkey-10o6.2	99	66.238	Kryptolebias_marmoratus
ENSXCOG00000000855	si:dkey-10o6.2	99	64.725	ENSLBEG00000003839	si:dkey-10o6.2	99	64.725	Labrus_bergylta
ENSXCOG00000000855	si:dkey-10o6.2	100	62.821	ENSLBEG00000003823	si:dkey-10o6.2	91	62.821	Labrus_bergylta
ENSXCOG00000000855	si:dkey-10o6.2	100	70.288	ENSMAMG00000023020	si:dkey-10o6.2	100	70.288	Mastacembelus_armatus
ENSXCOG00000000855	si:dkey-10o6.2	100	69.329	ENSMAMG00000023022	si:dkey-10o6.2	100	69.329	Mastacembelus_armatus
ENSXCOG00000000855	si:dkey-10o6.2	99	68.590	ENSMAMG00000023025	-	99	68.590	Mastacembelus_armatus
ENSXCOG00000000855	si:dkey-10o6.2	99	67.949	ENSMAMG00000023026	-	99	67.949	Mastacembelus_armatus
ENSXCOG00000000855	si:dkey-10o6.2	100	72.436	ENSMZEG00005012018	si:dkey-10o6.2	100	72.436	Maylandia_zebra
ENSXCOG00000000855	si:dkey-10o6.2	99	64.856	ENSMMOG00000020383	si:dkey-10o6.2	97	64.856	Mola_mola
ENSXCOG00000000855	si:dkey-10o6.2	100	67.197	ENSMALG00000011300	si:dkey-10o6.2	100	67.197	Monopterus_albus
ENSXCOG00000000855	si:dkey-10o6.2	100	66.346	ENSNBRG00000015840	si:dkey-10o6.2	100	66.346	Neolamprologus_brichardi
ENSXCOG00000000855	si:dkey-10o6.2	100	71.795	ENSONIG00000015572	si:dkey-10o6.2	100	71.795	Oreochromis_niloticus
ENSXCOG00000000855	si:dkey-10o6.2	100	65.495	ENSORLG00000001314	si:dkey-10o6.2	100	65.495	Oryzias_latipes
ENSXCOG00000000855	si:dkey-10o6.2	100	65.176	ENSORLG00020002660	si:dkey-10o6.2	100	65.176	Oryzias_latipes_hni
ENSXCOG00000000855	si:dkey-10o6.2	99	65.705	ENSOMEG00000003617	si:dkey-10o6.2	97	65.705	Oryzias_melastigma
ENSXCOG00000000855	si:dkey-10o6.2	99	60.645	ENSPKIG00000004183	si:dkey-10o6.2	86	60.645	Paramormyrops_kingsleyae
ENSXCOG00000000855	si:dkey-10o6.2	99	59.295	ENSPKIG00000024109	-	98	61.479	Paramormyrops_kingsleyae
ENSXCOG00000000855	si:dkey-10o6.2	99	60.323	ENSPKIG00000004206	si:dkey-10o6.2	80	60.323	Paramormyrops_kingsleyae
ENSXCOG00000000855	si:dkey-10o6.2	99	54.952	ENSPMGG00000021603	si:dkey-10o6.2	99	54.777	Periophthalmus_magnuspinnatus
ENSXCOG00000000855	si:dkey-10o6.2	99	83.766	ENSPFOG00000017244	si:dkey-10o6.2	97	83.766	Poecilia_formosa
ENSXCOG00000000855	si:dkey-10o6.2	99	82.958	ENSPLAG00000008037	si:dkey-10o6.2	100	82.958	Poecilia_latipinna
ENSXCOG00000000855	si:dkey-10o6.2	70	84.018	ENSPMEG00000020748	si:dkey-10o6.2	96	84.038	Poecilia_mexicana
ENSXCOG00000000855	si:dkey-10o6.2	99	83.974	ENSPREG00000005108	si:dkey-10o6.2	99	83.974	Poecilia_reticulata
ENSXCOG00000000855	si:dkey-10o6.2	100	71.154	ENSPNYG00000010698	si:dkey-10o6.2	100	71.154	Pundamilia_nyererei
ENSXCOG00000000855	si:dkey-10o6.2	84	60.227	ENSPNAG00000014485	-	79	60.227	Pygocentrus_nattereri
ENSXCOG00000000855	si:dkey-10o6.2	99	63.898	ENSPNAG00000014123	si:dkey-10o6.2	97	63.898	Pygocentrus_nattereri
ENSXCOG00000000855	si:dkey-10o6.2	95	61.824	ENSSFOG00015015345	si:dkey-10o6.2	95	61.824	Scleropages_formosus
ENSXCOG00000000855	si:dkey-10o6.2	100	69.231	ENSSMAG00000019016	si:dkey-10o6.2	100	69.231	Scophthalmus_maximus
ENSXCOG00000000855	si:dkey-10o6.2	100	72.436	ENSSDUG00000000943	si:dkey-10o6.2	100	72.436	Seriola_dumerili
ENSXCOG00000000855	si:dkey-10o6.2	100	72.115	ENSSLDG00000003462	si:dkey-10o6.2	100	72.115	Seriola_lalandi_dorsalis
ENSXCOG00000000855	si:dkey-10o6.2	100	72.756	ENSSPAG00000020962	si:dkey-10o6.2	100	72.756	Stegastes_partitus
ENSXCOG00000000855	si:dkey-10o6.2	100	63.462	ENSTRUG00000019532	si:dkey-10o6.2	100	63.462	Takifugu_rubripes
ENSXCOG00000000855	si:dkey-10o6.2	100	95.833	ENSXMAG00000012432	si:dkey-10o6.2	100	95.833	Xiphophorus_maculatus