EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000000975 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1363 bases
Position: chrKQ557204.1:17529537-17530899
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001195	RF-1	PF00472.20	7.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001211	-	510	-	ENSXCOP00000001195	169 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000000975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000000975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000000975	si:ch211-275j6.5	59	49.495	ENSXCOG00000004260	-	62	49.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000000975	si:ch211-275j6.5	74	61.600	ENSG00000130921	C12orf65	83	61.345	Homo_sapiens
ENSXCOG00000000975	si:ch211-275j6.5	99	73.214	ENSAPOG00000000995	si:ch211-275j6.5	99	73.214	Acanthochromis_polyacanthus
ENSXCOG00000000975	si:ch211-275j6.5	92	76.774	ENSACIG00000001644	si:ch211-275j6.5	97	76.774	Amphilophus_citrinellus
ENSXCOG00000000975	si:ch211-275j6.5	91	78.065	ENSAOCG00000005589	si:ch211-275j6.5	96	78.571	Amphiprion_ocellaris
ENSXCOG00000000975	si:ch211-275j6.5	99	73.964	ENSAPEG00000024618	si:ch211-275j6.5	99	73.964	Amphiprion_percula
ENSXCOG00000000975	si:ch211-275j6.5	100	68.639	ENSATEG00000011661	si:ch211-275j6.5	90	68.639	Anabas_testudineus
ENSXCOG00000000975	si:ch211-275j6.5	71	65.000	ENSAPLG00000016073	C12orf65	100	65.000	Anas_platyrhynchos
ENSXCOG00000000975	si:ch211-275j6.5	86	60.690	ENSACAG00000015561	C12orf65	71	60.690	Anolis_carolinensis
ENSXCOG00000000975	si:ch211-275j6.5	63	65.094	ENSANAG00000022881	C12orf65	81	60.145	Aotus_nancymaae
ENSXCOG00000000975	si:ch211-275j6.5	100	73.964	ENSACLG00000023906	si:ch211-275j6.5	100	73.964	Astatotilapia_calliptera
ENSXCOG00000000975	si:ch211-275j6.5	66	74.561	ENSAMXG00000031765	si:ch211-275j6.5	80	70.769	Astyanax_mexicanus
ENSXCOG00000000975	si:ch211-275j6.5	85	60.000	ENSBTAG00000020503	C17H12orf65	84	58.000	Bos_taurus
ENSXCOG00000000975	si:ch211-275j6.5	64	62.963	ENSCJAG00000016579	C12orf65	81	59.420	Callithrix_jacchus
ENSXCOG00000000975	si:ch211-275j6.5	69	61.789	ENSCAFG00000007512	C26H12orf65	65	56.774	Canis_familiaris
ENSXCOG00000000975	si:ch211-275j6.5	69	61.789	ENSCAFG00020016169	C12orf65	93	56.774	Canis_lupus_dingo
ENSXCOG00000000975	si:ch211-275j6.5	79	63.158	ENSCHIG00000022229	C12orf65	75	60.870	Capra_hircus
ENSXCOG00000000975	si:ch211-275j6.5	61	66.019	ENSCAPG00000014691	C12orf65	76	58.156	Cavia_aperea
ENSXCOG00000000975	si:ch211-275j6.5	59	65.347	ENSCPOG00000007583	C12orf65	76	57.554	Cavia_porcellus
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSCATG00000040685	C12orf65	93	54.717	Cercocebus_atys
ENSXCOG00000000975	si:ch211-275j6.5	51	68.966	ENSCLAG00000014329	C12orf65	65	60.331	Chinchilla_lanigera
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSCSAG00000002068	C12orf65	91	54.717	Chlorocebus_sabaeus
ENSXCOG00000000975	si:ch211-275j6.5	88	56.757	ENSCPBG00000025970	C12orf65	87	56.757	Chrysemys_picta_bellii
ENSXCOG00000000975	si:ch211-275j6.5	57	65.979	ENSCGRG00001013424	2810006K23Rik	70	59.690	Cricetulus_griseus_chok1gshd
ENSXCOG00000000975	si:ch211-275j6.5	57	65.979	ENSCGRG00000003037	2810006K23Rik	70	59.690	Cricetulus_griseus_crigri
ENSXCOG00000000975	si:ch211-275j6.5	96	61.350	ENSCSEG00000014536	si:ch211-275j6.5	96	61.350	Cynoglossus_semilaevis
ENSXCOG00000000975	si:ch211-275j6.5	99	78.947	ENSCVAG00000023000	si:ch211-275j6.5	99	78.947	Cyprinodon_variegatus
ENSXCOG00000000975	si:ch211-275j6.5	79	69.925	ENSDARG00000097803	si:ch211-275j6.5	96	69.925	Danio_rerio
ENSXCOG00000000975	si:ch211-275j6.5	52	64.773	ENSDNOG00000034728	C12orf65	67	59.821	Dasypus_novemcinctus
ENSXCOG00000000975	si:ch211-275j6.5	65	63.393	ENSDORG00000026069	2810006K23Rik	78	60.741	Dipodomys_ordii
ENSXCOG00000000975	si:ch211-275j6.5	73	46.774	FBgn0050100	CG30100	84	46.774	Drosophila_melanogaster
ENSXCOG00000000975	si:ch211-275j6.5	62	63.810	ENSETEG00000005627	C12orf65	83	58.394	Echinops_telfairi
ENSXCOG00000000975	si:ch211-275j6.5	50	75.294	ENSEASG00005012587	C12orf65	80	60.145	Equus_asinus_asinus
ENSXCOG00000000975	si:ch211-275j6.5	50	75.294	ENSECAG00000001057	C8H12orf65	80	60.145	Equus_caballus
ENSXCOG00000000975	si:ch211-275j6.5	63	66.038	ENSEEUG00000007231	C12orf65	80	57.971	Erinaceus_europaeus
ENSXCOG00000000975	si:ch211-275j6.5	95	61.111	ENSELUG00000015178	lg13h12orf65	96	61.111	Esox_lucius
ENSXCOG00000000975	si:ch211-275j6.5	57	65.306	ENSFCAG00000015328	C12orf65	78	59.231	Felis_catus
ENSXCOG00000000975	si:ch211-275j6.5	83	54.430	ENSFALG00000009261	C12orf65	98	53.797	Ficedula_albicollis
ENSXCOG00000000975	si:ch211-275j6.5	99	86.310	ENSFHEG00000017567	si:ch211-275j6.5	99	86.310	Fundulus_heteroclitus
ENSXCOG00000000975	si:ch211-275j6.5	78	74.809	ENSGMOG00000012139	si:ch211-275j6.5	88	75.385	Gadus_morhua
ENSXCOG00000000975	si:ch211-275j6.5	94	54.088	ENSGALG00000029390	C15H12ORF65	95	54.088	Gallus_gallus
ENSXCOG00000000975	si:ch211-275j6.5	92	70.968	ENSGACG00000008255	si:ch211-275j6.5	97	70.968	Gasterosteus_aculeatus
ENSXCOG00000000975	si:ch211-275j6.5	66	61.261	ENSGAGG00000000823	C12orf65	84	58.594	Gopherus_agassizii
ENSXCOG00000000975	si:ch211-275j6.5	74	61.600	ENSGGOG00000012850	C12orf65	80	60.145	Gorilla_gorilla
ENSXCOG00000000975	si:ch211-275j6.5	100	73.964	ENSHBUG00000007273	si:ch211-275j6.5	100	73.964	Haplochromis_burtoni
ENSXCOG00000000975	si:ch211-275j6.5	51	68.966	ENSHGLG00000010966	C12orf65	72	55.862	Heterocephalus_glaber_female
ENSXCOG00000000975	si:ch211-275j6.5	51	68.966	ENSHGLG00100018631	C12orf65	72	55.862	Heterocephalus_glaber_male
ENSXCOG00000000975	si:ch211-275j6.5	89	67.763	ENSHCOG00000019848	si:ch211-275j6.5	89	67.763	Hippocampus_comes
ENSXCOG00000000975	si:ch211-275j6.5	78	69.403	ENSIPUG00000020793	si:ch211-275j6.5	82	69.403	Ictalurus_punctatus
ENSXCOG00000000975	si:ch211-275j6.5	74	60.000	ENSSTOG00000016463	C12orf65	77	60.448	Ictidomys_tridecemlineatus
ENSXCOG00000000975	si:ch211-275j6.5	78	56.934	ENSJJAG00000023360	2810006K23Rik	72	56.934	Jaculus_jaculus
ENSXCOG00000000975	si:ch211-275j6.5	94	77.358	ENSKMAG00000018733	si:ch211-275j6.5	99	77.358	Kryptolebias_marmoratus
ENSXCOG00000000975	si:ch211-275j6.5	93	54.878	ENSLACG00000017355	C12orf65	75	64.228	Latimeria_chalumnae
ENSXCOG00000000975	si:ch211-275j6.5	72	63.636	ENSLOCG00000005702	si:ch211-275j6.5	100	63.636	Lepisosteus_oculatus
ENSXCOG00000000975	si:ch211-275j6.5	69	64.103	ENSLAFG00000002134	C12orf65	70	64.103	Loxodonta_africana
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSMMUG00000031495	C12orf65	93	54.717	Macaca_mulatta
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSMNEG00000044673	C12orf65	93	54.088	Macaca_nemestrina
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSMLEG00000044309	C12orf65	93	54.717	Mandrillus_leucophaeus
ENSXCOG00000000975	si:ch211-275j6.5	99	74.251	ENSMAMG00000017366	si:ch211-275j6.5	99	74.251	Mastacembelus_armatus
ENSXCOG00000000975	si:ch211-275j6.5	100	73.964	ENSMZEG00005000938	si:ch211-275j6.5	99	73.964	Maylandia_zebra
ENSXCOG00000000975	si:ch211-275j6.5	91	53.205	ENSMGAG00000003354	C12orf65	79	63.889	Meleagris_gallopavo
ENSXCOG00000000975	si:ch211-275j6.5	56	67.021	ENSMAUG00000010304	2810006K23Rik	75	67.021	Mesocricetus_auratus
ENSXCOG00000000975	si:ch211-275j6.5	64	62.385	ENSMICG00000037138	C12orf65	80	58.696	Microcebus_murinus
ENSXCOG00000000975	si:ch211-275j6.5	63	62.264	ENSMOCG00000017477	2810006K23Rik	70	58.915	Microtus_ochrogaster
ENSXCOG00000000975	si:ch211-275j6.5	96	70.370	ENSMMOG00000017134	si:ch211-275j6.5	99	67.456	Mola_mola
ENSXCOG00000000975	si:ch211-275j6.5	96	50.307	ENSMODG00000012450	C12orf65	90	50.307	Monodelphis_domestica
ENSXCOG00000000975	si:ch211-275j6.5	99	76.048	ENSMALG00000012291	si:ch211-275j6.5	99	75.595	Monopterus_albus
ENSXCOG00000000975	si:ch211-275j6.5	59	64.486	MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	58.993	Mus_caroli
ENSXCOG00000000975	si:ch211-275j6.5	57	67.010	ENSMUSG00000047635	2810006K23Rik	70	60.465	Mus_musculus
ENSXCOG00000000975	si:ch211-275j6.5	59	65.657	MGP_SPRETEiJ_G0028745	2810006K23Rik	70	60.465	Mus_spretus
ENSXCOG00000000975	si:ch211-275j6.5	74	58.400	ENSMPUG00000001679	C12orf65	75	57.664	Mustela_putorius_furo
ENSXCOG00000000975	si:ch211-275j6.5	69	59.829	ENSMLUG00000007001	C12orf65	71	59.829	Myotis_lucifugus
ENSXCOG00000000975	si:ch211-275j6.5	85	57.241	ENSNGAG00000010625	2810006K23Rik	73	60.305	Nannospalax_galili
ENSXCOG00000000975	si:ch211-275j6.5	100	73.373	ENSNBRG00000008082	si:ch211-275j6.5	100	73.373	Neolamprologus_brichardi
ENSXCOG00000000975	si:ch211-275j6.5	74	61.600	ENSNLEG00000001470	C12orf65	80	60.145	Nomascus_leucogenys
ENSXCOG00000000975	si:ch211-275j6.5	91	52.564	ENSMEUG00000009430	C12orf65	96	52.564	Notamacropus_eugenii
ENSXCOG00000000975	si:ch211-275j6.5	83	54.610	ENSOPRG00000011029	C12orf65	84	54.610	Ochotona_princeps
ENSXCOG00000000975	si:ch211-275j6.5	81	55.072	ENSODEG00000011382	-	79	55.072	Octodon_degus
ENSXCOG00000000975	si:ch211-275j6.5	79	82.836	ENSONIG00000013298	si:ch211-275j6.5	80	82.836	Oreochromis_niloticus
ENSXCOG00000000975	si:ch211-275j6.5	82	58.696	ENSOANG00000012866	C12orf65	77	58.696	Ornithorhynchus_anatinus
ENSXCOG00000000975	si:ch211-275j6.5	61	62.136	ENSOCUG00000011888	C12orf65	69	62.136	Oryctolagus_cuniculus
ENSXCOG00000000975	si:ch211-275j6.5	95	75.155	ENSORLG00000006153	si:ch211-275j6.5	97	74.233	Oryzias_latipes
ENSXCOG00000000975	si:ch211-275j6.5	95	75.776	ENSORLG00020017188	si:ch211-275j6.5	97	74.847	Oryzias_latipes_hni
ENSXCOG00000000975	si:ch211-275j6.5	95	75.155	ENSORLG00015005780	c9h12orf65	97	74.233	Oryzias_latipes_hsok
ENSXCOG00000000975	si:ch211-275j6.5	96	71.779	ENSOMEG00000001663	si:ch211-275j6.5	97	71.779	Oryzias_melastigma
ENSXCOG00000000975	si:ch211-275j6.5	64	59.633	ENSOGAG00000010778	C12orf65	82	56.522	Otolemur_garnettii
ENSXCOG00000000975	si:ch211-275j6.5	79	61.654	ENSOARG00000005214	C12orf65	76	61.654	Ovis_aries
ENSXCOG00000000975	si:ch211-275j6.5	74	61.600	ENSPPAG00000029654	C12orf65	80	60.145	Pan_paniscus
ENSXCOG00000000975	si:ch211-275j6.5	69	64.407	ENSPPRG00000024772	C12orf65	78	60.769	Panthera_pardus
ENSXCOG00000000975	si:ch211-275j6.5	77	60.305	ENSPTIG00000011744	C12orf65	78	60.305	Panthera_tigris_altaica
ENSXCOG00000000975	si:ch211-275j6.5	75	61.905	ENSPTRG00000005595	C12H12orf65	80	60.870	Pan_troglodytes
ENSXCOG00000000975	si:ch211-275j6.5	73	58.268	ENSPANG00000015388	C12orf65	93	54.717	Papio_anubis
ENSXCOG00000000975	si:ch211-275j6.5	93	59.877	ENSPKIG00000001571	si:ch211-275j6.5	94	59.877	Paramormyrops_kingsleyae
ENSXCOG00000000975	si:ch211-275j6.5	96	55.556	ENSPSIG00000013010	C12orf65	87	55.556	Pelodiscus_sinensis
ENSXCOG00000000975	si:ch211-275j6.5	78	73.485	ENSPMGG00000018342	si:ch211-275j6.5	78	73.485	Periophthalmus_magnuspinnatus
ENSXCOG00000000975	si:ch211-275j6.5	60	58.824	ENSPMAG00000000514	si:ch211-275j6.5	85	58.511	Petromyzon_marinus
ENSXCOG00000000975	si:ch211-275j6.5	90	50.658	ENSPCIG00000010996	C12orf65	60	60.194	Phascolarctos_cinereus
ENSXCOG00000000975	si:ch211-275j6.5	100	94.083	ENSPLAG00000001661	si:ch211-275j6.5	100	94.083	Poecilia_latipinna
ENSXCOG00000000975	si:ch211-275j6.5	99	94.643	ENSPMEG00000009201	si:ch211-275j6.5	100	94.643	Poecilia_mexicana
ENSXCOG00000000975	si:ch211-275j6.5	99	94.643	ENSPMEG00000018566	si:ch211-275j6.5	100	94.643	Poecilia_mexicana
ENSXCOG00000000975	si:ch211-275j6.5	100	92.899	ENSPREG00000021268	si:ch211-275j6.5	100	92.899	Poecilia_reticulata
ENSXCOG00000000975	si:ch211-275j6.5	63	66.038	ENSPPYG00000005082	C12orf65	80	60.145	Pongo_abelii
ENSXCOG00000000975	si:ch211-275j6.5	63	60.748	ENSPCAG00000016193	C12orf65	80	58.209	Procavia_capensis
ENSXCOG00000000975	si:ch211-275j6.5	64	63.303	ENSPCOG00000021574	C12orf65	82	56.579	Propithecus_coquereli
ENSXCOG00000000975	si:ch211-275j6.5	83	59.155	ENSPVAG00000015301	C12orf65	82	59.155	Pteropus_vampyrus
ENSXCOG00000000975	si:ch211-275j6.5	100	73.964	ENSPNYG00000014456	si:ch211-275j6.5	100	73.964	Pundamilia_nyererei
ENSXCOG00000000975	si:ch211-275j6.5	98	59.639	ENSPNAG00000019769	si:ch211-275j6.5	93	59.639	Pygocentrus_nattereri
ENSXCOG00000000975	si:ch211-275j6.5	59	65.657	ENSRNOG00000001073	RGD1563482	71	61.240	Rattus_norvegicus
ENSXCOG00000000975	si:ch211-275j6.5	63	66.038	ENSRBIG00000040789	C12orf65	80	60.145	Rhinopithecus_bieti
ENSXCOG00000000975	si:ch211-275j6.5	63	65.094	ENSRROG00000031384	C12orf65	91	54.717	Rhinopithecus_roxellana
ENSXCOG00000000975	si:ch211-275j6.5	63	66.038	ENSSBOG00000026629	C12orf65	78	59.420	Saimiri_boliviensis_boliviensis
ENSXCOG00000000975	si:ch211-275j6.5	66	63.964	ENSSHAG00000014988	C12orf65	56	64.078	Sarcophilus_harrisii
ENSXCOG00000000975	si:ch211-275j6.5	98	60.465	ENSSFOG00015019122	si:ch211-275j6.5	98	60.465	Scleropages_formosus
ENSXCOG00000000975	si:ch211-275j6.5	99	73.214	ENSSMAG00000016770	si:ch211-275j6.5	99	73.214	Scophthalmus_maximus
ENSXCOG00000000975	si:ch211-275j6.5	82	79.856	ENSSDUG00000020401	si:ch211-275j6.5	90	77.083	Seriola_dumerili
ENSXCOG00000000975	si:ch211-275j6.5	99	70.238	ENSSLDG00000017638	si:ch211-275j6.5	99	70.238	Seriola_lalandi_dorsalis
ENSXCOG00000000975	si:ch211-275j6.5	70	65.546	ENSSPUG00000012613	C12orf65	73	65.546	Sphenodon_punctatus
ENSXCOG00000000975	si:ch211-275j6.5	100	72.781	ENSSPAG00000023476	si:ch211-275j6.5	100	72.781	Stegastes_partitus
ENSXCOG00000000975	si:ch211-275j6.5	66	63.793	ENSSSCG00000009774	C12orf65	78	64.655	Sus_scrofa
ENSXCOG00000000975	si:ch211-275j6.5	72	59.836	ENSTGUG00000005440	C12orf65	78	66.000	Taeniopygia_guttata
ENSXCOG00000000975	si:ch211-275j6.5	99	70.060	ENSTNIG00000015832	si:ch211-275j6.5	99	70.060	Tetraodon_nigroviridis
ENSXCOG00000000975	si:ch211-275j6.5	57	69.697	ENSTBEG00000012500	C12orf65	78	63.566	Tupaia_belangeri
ENSXCOG00000000975	si:ch211-275j6.5	70	63.866	ENSTTRG00000015880	C12orf65	81	59.712	Tursiops_truncatus
ENSXCOG00000000975	si:ch211-275j6.5	55	70.968	ENSUAMG00000019669	C12orf65	76	63.200	Ursus_americanus
ENSXCOG00000000975	si:ch211-275j6.5	55	70.968	ENSUMAG00000004025	C12orf65	76	63.200	Ursus_maritimus
ENSXCOG00000000975	si:ch211-275j6.5	69	60.976	ENSVVUG00000027811	C12orf65	93	56.129	Vulpes_vulpes