EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001032 (Gene tree)
Gene ID: -
Gene Symbol: riok3
Alias: fb10c11|wu:fb10c11|zgc:100972
Full Name: RIO kinase 3 (yeast)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6175 bases
Position: chrKQ557214.1:21511550-21517724
Accession: ZDB-GENE-040801-133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003241	RIO1	PF01163.22	1.5e-69	1	1
ENSXCOP00000002797	RIO1	PF01163.22	6.4e-52	1	1
ENSXCOP00000002632	RIO1	PF01163.22	6.7e-52	1	1
ENSXCOP00000002365	RIO1	PF01163.22	6.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003279	-	1464	-	ENSXCOP00000003241	488 (aa)	-	-
ENSXCOT00000002834	-	1476	-	ENSXCOP00000002797	491 (aa)	-	-
ENSXCOT00000002667	-	1503	-	ENSXCOP00000002632	500 (aa)	-	-
ENSXCOT00000002399	-	1524	-	ENSXCOP00000002365	507 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001032	riok3	61	42.053	ENSXCOG00000000245	riok1	71	42.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001032	riok3	99	72.112	ENSG00000101782	RIOK3	95	72.112	Homo_sapiens
ENSXCOG00000001032	riok3	100	83.838	ENSAPOG00000020861	riok3	97	83.838	Acanthochromis_polyacanthus
ENSXCOG00000001032	riok3	99	72.510	ENSAMEG00000013754	RIOK3	82	72.510	Ailuropoda_melanoleuca
ENSXCOG00000001032	riok3	100	87.398	ENSACIG00000019894	riok3	97	87.398	Amphilophus_citrinellus
ENSXCOG00000001032	riok3	100	85.657	ENSAOCG00000007172	riok3	99	84.823	Amphiprion_ocellaris
ENSXCOG00000001032	riok3	100	85.657	ENSAPEG00000002536	riok3	99	84.200	Amphiprion_percula
ENSXCOG00000001032	riok3	100	85.830	ENSATEG00000018303	riok3	98	85.830	Anabas_testudineus
ENSXCOG00000001032	riok3	99	72.088	ENSAPLG00000006497	RIOK3	96	72.088	Anas_platyrhynchos
ENSXCOG00000001032	riok3	99	70.916	ENSACAG00000000159	RIOK3	95	70.916	Anolis_carolinensis
ENSXCOG00000001032	riok3	89	59.910	ENSANAG00000030146	RIOK3	89	59.910	Aotus_nancymaae
ENSXCOG00000001032	riok3	99	86.270	ENSACLG00000018966	riok3	99	86.270	Astatotilapia_calliptera
ENSXCOG00000001032	riok3	97	77.131	ENSAMXG00000015617	riok3	97	76.162	Astyanax_mexicanus
ENSXCOG00000001032	riok3	99	71.713	ENSBTAG00000010042	RIOK3	95	71.713	Bos_taurus
ENSXCOG00000001032	riok3	98	36.759	WBGene00014012	riok-3	94	36.759	Caenorhabditis_elegans
ENSXCOG00000001032	riok3	99	71.881	ENSCJAG00000020556	RIOK3	96	71.881	Callithrix_jacchus
ENSXCOG00000001032	riok3	99	72.112	ENSCAFG00000018201	RIOK3	95	72.112	Canis_familiaris
ENSXCOG00000001032	riok3	99	72.782	ENSCAFG00020014801	RIOK3	99	75.240	Canis_lupus_dingo
ENSXCOG00000001032	riok3	99	72.837	ENSCHIG00000009312	RIOK3	98	72.837	Capra_hircus
ENSXCOG00000001032	riok3	99	71.316	ENSTSYG00000000142	RIOK3	95	73.394	Carlito_syrichta
ENSXCOG00000001032	riok3	97	72.222	ENSCAPG00000005756	RIOK3	99	72.222	Cavia_aperea
ENSXCOG00000001032	riok3	99	72.455	ENSCPOG00000007991	RIOK3	95	72.455	Cavia_porcellus
ENSXCOG00000001032	riok3	99	72.800	ENSCCAG00000028338	RIOK3	95	74.707	Cebus_capucinus
ENSXCOG00000001032	riok3	99	71.912	ENSCATG00000040824	RIOK3	96	74.473	Cercocebus_atys
ENSXCOG00000001032	riok3	99	72.655	ENSCLAG00000006767	RIOK3	95	72.655	Chinchilla_lanigera
ENSXCOG00000001032	riok3	99	71.912	ENSCSAG00000017680	RIOK3	95	71.912	Chlorocebus_sabaeus
ENSXCOG00000001032	riok3	87	72.266	ENSCHOG00000008343	RIOK3	82	72.266	Choloepus_hoffmanni
ENSXCOG00000001032	riok3	99	73.535	ENSCPBG00000027226	RIOK3	95	73.535	Chrysemys_picta_bellii
ENSXCOG00000001032	riok3	97	46.063	ENSCSAVG00000003068	-	99	48.247	Ciona_savignyi
ENSXCOG00000001032	riok3	95	60.166	ENSCANG00000035939	RIOK3	95	69.231	Colobus_angolensis_palliatus
ENSXCOG00000001032	riok3	99	72.177	ENSCGRG00001013249	Riok3	95	72.782	Cricetulus_griseus_chok1gshd
ENSXCOG00000001032	riok3	99	71.774	ENSCGRG00000017636	Riok3	95	72.379	Cricetulus_griseus_crigri
ENSXCOG00000001032	riok3	100	79.798	ENSCSEG00000018289	riok3	99	79.874	Cynoglossus_semilaevis
ENSXCOG00000001032	riok3	100	85.253	ENSCVAG00000011848	riok3	97	85.253	Cyprinodon_variegatus
ENSXCOG00000001032	riok3	100	76.566	ENSDARG00000042751	riok3	97	76.566	Danio_rerio
ENSXCOG00000001032	riok3	99	71.713	ENSDNOG00000039433	RIOK3	95	71.713	Dasypus_novemcinctus
ENSXCOG00000001032	riok3	99	71.513	ENSDORG00000011663	Riok3	97	71.513	Dipodomys_ordii
ENSXCOG00000001032	riok3	91	41.942	FBgn0031643	CG3008	84	42.690	Drosophila_melanogaster
ENSXCOG00000001032	riok3	93	72.000	ENSETEG00000003689	RIOK3	95	72.000	Echinops_telfairi
ENSXCOG00000001032	riok3	97	51.760	ENSEBUG00000000555	riok3	95	51.760	Eptatretus_burgeri
ENSXCOG00000001032	riok3	99	71.400	ENSEASG00005002317	RIOK3	96	71.400	Equus_asinus_asinus
ENSXCOG00000001032	riok3	99	71.600	ENSECAG00000009028	RIOK3	96	71.600	Equus_caballus
ENSXCOG00000001032	riok3	99	59.274	ENSEEUG00000007005	RIOK3	99	59.274	Erinaceus_europaeus
ENSXCOG00000001032	riok3	99	76.782	ENSELUG00000017655	riok3	96	76.782	Esox_lucius
ENSXCOG00000001032	riok3	99	72.636	ENSFCAG00000000517	RIOK3	95	72.636	Felis_catus
ENSXCOG00000001032	riok3	99	71.944	ENSFALG00000006145	RIOK3	95	71.944	Ficedula_albicollis
ENSXCOG00000001032	riok3	99	72.167	ENSFDAG00000001548	RIOK3	95	72.167	Fukomys_damarensis
ENSXCOG00000001032	riok3	98	87.371	ENSFHEG00000011350	riok3	97	87.273	Fundulus_heteroclitus
ENSXCOG00000001032	riok3	90	81.490	ENSGMOG00000005157	riok3	96	81.490	Gadus_morhua
ENSXCOG00000001032	riok3	99	71.717	ENSGALG00000015004	RIOK3	95	71.717	Gallus_gallus
ENSXCOG00000001032	riok3	93	89.254	ENSGAFG00000002403	riok3	90	89.254	Gambusia_affinis
ENSXCOG00000001032	riok3	100	81.124	ENSGACG00000000880	riok3	97	81.124	Gasterosteus_aculeatus
ENSXCOG00000001032	riok3	99	72.032	ENSGAGG00000024785	RIOK3	95	72.032	Gopherus_agassizii
ENSXCOG00000001032	riok3	58	72.759	ENSGGOG00000036734	-	93	72.759	Gorilla_gorilla
ENSXCOG00000001032	riok3	100	86.032	ENSHBUG00000003233	riok3	97	86.032	Haplochromis_burtoni
ENSXCOG00000001032	riok3	99	72.255	ENSHGLG00000003885	RIOK3	95	72.255	Heterocephalus_glaber_female
ENSXCOG00000001032	riok3	99	72.255	ENSHGLG00100002077	RIOK3	95	72.255	Heterocephalus_glaber_male
ENSXCOG00000001032	riok3	100	79.283	ENSHCOG00000006794	riok3	97	79.283	Hippocampus_comes
ENSXCOG00000001032	riok3	100	74.645	ENSIPUG00000001406	Riok3	97	74.645	Ictalurus_punctatus
ENSXCOG00000001032	riok3	99	72.088	ENSSTOG00000006517	RIOK3	95	72.088	Ictidomys_tridecemlineatus
ENSXCOG00000001032	riok3	99	71.856	ENSJJAG00000023689	Riok3	94	71.856	Jaculus_jaculus
ENSXCOG00000001032	riok3	100	85.657	ENSKMAG00000007259	riok3	97	85.657	Kryptolebias_marmoratus
ENSXCOG00000001032	riok3	100	83.232	ENSLBEG00000013689	riok3	97	83.232	Labrus_bergylta
ENSXCOG00000001032	riok3	99	71.487	ENSLACG00000017326	RIOK3	95	71.487	Latimeria_chalumnae
ENSXCOG00000001032	riok3	99	74.694	ENSLOCG00000001652	riok3	95	74.694	Lepisosteus_oculatus
ENSXCOG00000001032	riok3	99	71.683	ENSLAFG00000001380	RIOK3	96	71.683	Loxodonta_africana
ENSXCOG00000001032	riok3	99	72.112	ENSMMUG00000021478	RIOK3	96	74.473	Macaca_mulatta
ENSXCOG00000001032	riok3	88	71.504	ENSMNEG00000041106	RIOK3	94	71.504	Macaca_nemestrina
ENSXCOG00000001032	riok3	99	72.112	ENSMLEG00000028187	RIOK3	96	74.473	Mandrillus_leucophaeus
ENSXCOG00000001032	riok3	100	84.242	ENSMAMG00000008502	riok3	97	84.242	Mastacembelus_armatus
ENSXCOG00000001032	riok3	100	86.032	ENSMZEG00005020212	riok3	97	86.032	Maylandia_zebra
ENSXCOG00000001032	riok3	99	71.227	ENSMGAG00000010079	RIOK3	95	71.227	Meleagris_gallopavo
ENSXCOG00000001032	riok3	99	71.912	ENSMAUG00000020527	Riok3	95	71.912	Mesocricetus_auratus
ENSXCOG00000001032	riok3	99	72.510	ENSMICG00000009293	RIOK3	95	72.510	Microcebus_murinus
ENSXCOG00000001032	riok3	99	71.257	ENSMOCG00000012114	Riok3	92	71.257	Microtus_ochrogaster
ENSXCOG00000001032	riok3	98	80.372	ENSMMOG00000019204	riok3	99	80.372	Mola_mola
ENSXCOG00000001032	riok3	99	72.565	ENSMODG00000021496	RIOK3	96	72.565	Monodelphis_domestica
ENSXCOG00000001032	riok3	100	83.838	ENSMALG00000020848	riok3	97	83.838	Monopterus_albus
ENSXCOG00000001032	riok3	99	72.112	MGP_CAROLIEiJ_G0022001	Riok3	95	72.112	Mus_caroli
ENSXCOG00000001032	riok3	99	71.912	ENSMUSG00000024404	Riok3	97	89.286	Mus_musculus
ENSXCOG00000001032	riok3	99	72.112	MGP_PahariEiJ_G0018739	Riok3	95	72.112	Mus_pahari
ENSXCOG00000001032	riok3	99	71.906	ENSMPUG00000005772	RIOK3	97	71.906	Mustela_putorius_furo
ENSXCOG00000001032	riok3	99	71.485	ENSMLUG00000007081	RIOK3	96	71.485	Myotis_lucifugus
ENSXCOG00000001032	riok3	99	73.092	ENSNGAG00000011446	Riok3	95	73.092	Nannospalax_galili
ENSXCOG00000001032	riok3	80	86.408	ENSNBRG00000016677	riok3	84	86.408	Neolamprologus_brichardi
ENSXCOG00000001032	riok3	99	71.912	ENSNLEG00000006758	RIOK3	94	74.005	Nomascus_leucogenys
ENSXCOG00000001032	riok3	99	71.769	ENSMEUG00000006292	RIOK3	96	71.769	Notamacropus_eugenii
ENSXCOG00000001032	riok3	99	71.371	ENSOPRG00000004803	RIOK3	95	71.831	Ochotona_princeps
ENSXCOG00000001032	riok3	99	72.255	ENSODEG00000006444	RIOK3	96	72.255	Octodon_degus
ENSXCOG00000001032	riok3	99	83.702	ENSONIG00000013422	riok3	100	83.702	Oreochromis_niloticus
ENSXCOG00000001032	riok3	98	73.469	ENSOANG00000012074	RIOK3	99	73.469	Ornithorhynchus_anatinus
ENSXCOG00000001032	riok3	99	72.435	ENSOCUG00000016820	RIOK3	95	72.435	Oryctolagus_cuniculus
ENSXCOG00000001032	riok3	99	84.178	ENSORLG00000003395	riok3	97	84.178	Oryzias_latipes
ENSXCOG00000001032	riok3	99	83.773	ENSORLG00020000672	riok3	97	83.773	Oryzias_latipes_hni
ENSXCOG00000001032	riok3	99	84.381	ENSORLG00015007372	riok3	97	84.381	Oryzias_latipes_hsok
ENSXCOG00000001032	riok3	99	84.990	ENSOMEG00000001380	riok3	97	84.990	Oryzias_melastigma
ENSXCOG00000001032	riok3	99	72.112	ENSOGAG00000014502	RIOK3	85	72.112	Otolemur_garnettii
ENSXCOG00000001032	riok3	99	71.912	ENSOARG00000008042	RIOK3	95	71.912	Ovis_aries
ENSXCOG00000001032	riok3	99	72.311	ENSPPAG00000030258	RIOK3	95	74.707	Pan_paniscus
ENSXCOG00000001032	riok3	99	72.636	ENSPPRG00000023302	RIOK3	95	72.636	Panthera_pardus
ENSXCOG00000001032	riok3	99	72.636	ENSPTIG00000000960	RIOK3	95	72.636	Panthera_tigris_altaica
ENSXCOG00000001032	riok3	99	72.112	ENSPTRG00000009918	RIOK3	95	74.473	Pan_troglodytes
ENSXCOG00000001032	riok3	99	72.112	ENSPANG00000011485	RIOK3	96	74.473	Papio_anubis
ENSXCOG00000001032	riok3	99	77.505	ENSPKIG00000018297	riok3	96	77.505	Paramormyrops_kingsleyae
ENSXCOG00000001032	riok3	99	71.630	ENSPSIG00000006250	RIOK3	95	71.630	Pelodiscus_sinensis
ENSXCOG00000001032	riok3	97	80.503	ENSPMGG00000009414	riok3	99	80.503	Periophthalmus_magnuspinnatus
ENSXCOG00000001032	riok3	99	72.510	ENSPEMG00000023794	Riok3	95	72.510	Peromyscus_maniculatus_bairdii
ENSXCOG00000001032	riok3	88	69.907	ENSPMAG00000003258	riok3	98	69.907	Petromyzon_marinus
ENSXCOG00000001032	riok3	96	72.840	ENSPCIG00000013991	RIOK3	99	72.840	Phascolarctos_cinereus
ENSXCOG00000001032	riok3	100	95.740	ENSPFOG00000024127	riok3	97	95.740	Poecilia_formosa
ENSXCOG00000001032	riok3	100	95.732	ENSPLAG00000004956	riok3	97	95.732	Poecilia_latipinna
ENSXCOG00000001032	riok3	98	95.031	ENSPMEG00000020108	riok3	97	94.919	Poecilia_mexicana
ENSXCOG00000001032	riok3	100	96.341	ENSPREG00000010010	riok3	97	96.341	Poecilia_reticulata
ENSXCOG00000001032	riok3	99	66.932	ENSPPYG00000009062	RIOK3	95	66.932	Pongo_abelii
ENSXCOG00000001032	riok3	76	72.266	ENSPCAG00000001021	RIOK3	73	72.266	Procavia_capensis
ENSXCOG00000001032	riok3	99	72.311	ENSPCOG00000022631	RIOK3	96	73.611	Propithecus_coquereli
ENSXCOG00000001032	riok3	99	60.161	ENSPVAG00000015817	RIOK3	95	60.161	Pteropus_vampyrus
ENSXCOG00000001032	riok3	100	86.032	ENSPNYG00000003271	riok3	97	86.032	Pundamilia_nyererei
ENSXCOG00000001032	riok3	100	75.304	ENSPNAG00000006213	riok3	97	75.304	Pygocentrus_nattereri
ENSXCOG00000001032	riok3	99	71.573	ENSRNOG00000023376	Riok3	95	72.177	Rattus_norvegicus
ENSXCOG00000001032	riok3	99	72.056	ENSRBIG00000035071	RIOK3	96	74.473	Rhinopithecus_bieti
ENSXCOG00000001032	riok3	99	72.056	ENSRROG00000045710	RIOK3	96	74.473	Rhinopithecus_roxellana
ENSXCOG00000001032	riok3	99	71.881	ENSSBOG00000034387	RIOK3	95	74.473	Saimiri_boliviensis_boliviensis
ENSXCOG00000001032	riok3	99	71.769	ENSSHAG00000011854	RIOK3	96	71.769	Sarcophilus_harrisii
ENSXCOG00000001032	riok3	99	76.375	ENSSFOG00015012912	riok3	97	76.375	Scleropages_formosus
ENSXCOG00000001032	riok3	100	83.636	ENSSMAG00000011527	riok3	97	83.636	Scophthalmus_maximus
ENSXCOG00000001032	riok3	100	85.020	ENSSDUG00000016018	riok3	97	85.020	Seriola_dumerili
ENSXCOG00000001032	riok3	66	85.549	ENSSLDG00000022246	riok3	96	85.549	Seriola_lalandi_dorsalis
ENSXCOG00000001032	riok3	87	73.047	ENSSARG00000010154	RIOK3	82	73.047	Sorex_araneus
ENSXCOG00000001032	riok3	99	72.984	ENSSPUG00000015246	RIOK3	95	72.984	Sphenodon_punctatus
ENSXCOG00000001032	riok3	100	86.492	ENSSPAG00000000601	riok3	97	86.492	Stegastes_partitus
ENSXCOG00000001032	riok3	99	72.112	ENSSSCG00000029518	RIOK3	99	76.538	Sus_scrofa
ENSXCOG00000001032	riok3	99	71.713	ENSTGUG00000010392	RIOK3	95	71.713	Taeniopygia_guttata
ENSXCOG00000001032	riok3	99	82.424	ENSTRUG00000007055	riok3	97	82.424	Takifugu_rubripes
ENSXCOG00000001032	riok3	98	74.896	ENSTNIG00000001855	riok3	99	74.896	Tetraodon_nigroviridis
ENSXCOG00000001032	riok3	55	73.191	ENSTBEG00000015851	RIOK3	52	73.191	Tupaia_belangeri
ENSXCOG00000001032	riok3	99	71.831	ENSTTRG00000008839	RIOK3	95	71.831	Tursiops_truncatus
ENSXCOG00000001032	riok3	100	71.094	ENSUAMG00000018410	RIOK3	97	71.094	Ursus_americanus
ENSXCOG00000001032	riok3	99	71.344	ENSUMAG00000020218	RIOK3	94	71.287	Ursus_maritimus
ENSXCOG00000001032	riok3	99	72.837	ENSVPAG00000009034	RIOK3	95	72.837	Vicugna_pacos
ENSXCOG00000001032	riok3	99	72.112	ENSVVUG00000003651	RIOK3	71	73.171	Vulpes_vulpes
ENSXCOG00000001032	riok3	99	70.528	ENSXETG00000027370	riok3	96	70.221	Xenopus_tropicalis
ENSXCOG00000001032	riok3	100	98.374	ENSXMAG00000012902	riok3	97	98.374	Xiphophorus_maculatus