EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001128 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 12910 bases
Position: chrKQ557202.1:20852691-20865600
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001397	PAM2	PF07145.15	2.5e-05	1	1
ENSXCOP00000001397	LsmAD	PF06741.13	1.2e-17	1	1
ENSXCOP00000001397	SM-ATX	PF14438.6	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001420	-	2409	-	ENSXCOP00000001397	802 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001128	-	74	62.745	ENSG00000168488	ATXN2L	100	62.766	Homo_sapiens
ENSXCOG00000001128	-	78	66.909	ENSAPOG00000010103	atxn2l	78	56.806	Acanthochromis_polyacanthus
ENSXCOG00000001128	-	99	79.052	ENSAPOG00000021412	-	81	79.899	Acanthochromis_polyacanthus
ENSXCOG00000001128	-	74	62.745	ENSAMEG00000015502	ATXN2L	62	62.745	Ailuropoda_melanoleuca
ENSXCOG00000001128	-	97	74.430	ENSACIG00000014731	-	99	74.007	Amphilophus_citrinellus
ENSXCOG00000001128	-	89	55.352	ENSACIG00000024435	atxn2l	78	56.397	Amphilophus_citrinellus
ENSXCOG00000001128	-	78	67.391	ENSAOCG00000011378	atxn2l	79	57.702	Amphiprion_ocellaris
ENSXCOG00000001128	-	91	79.403	ENSAOCG00000002581	-	83	79.701	Amphiprion_ocellaris
ENSXCOG00000001128	-	99	80.798	ENSAPEG00000011038	-	81	81.407	Amphiprion_percula
ENSXCOG00000001128	-	78	67.391	ENSAPEG00000005810	atxn2l	78	57.702	Amphiprion_percula
ENSXCOG00000001128	-	98	85.117	ENSATEG00000019382	-	75	84.595	Anabas_testudineus
ENSXCOG00000001128	-	77	62.044	ENSACAG00000005425	ATXN2L	65	63.953	Anolis_carolinensis
ENSXCOG00000001128	-	74	62.745	ENSANAG00000026257	ATXN2L	68	60.000	Aotus_nancymaae
ENSXCOG00000001128	-	88	53.846	ENSACLG00000016900	atxn2l	72	65.543	Astatotilapia_calliptera
ENSXCOG00000001128	-	98	80.206	ENSACLG00000009975	-	78	79.949	Astatotilapia_calliptera
ENSXCOG00000001128	-	95	65.013	ENSAMXG00000020362	-	75	63.613	Astyanax_mexicanus
ENSXCOG00000001128	-	81	79.310	ENSAMXG00000003332	atxn2l	72	79.310	Astyanax_mexicanus
ENSXCOG00000001128	-	74	62.745	ENSCJAG00000006251	ATXN2L	62	62.745	Callithrix_jacchus
ENSXCOG00000001128	-	79	62.353	ENSCHIG00000009907	ATXN2L	63	62.353	Capra_hircus
ENSXCOG00000001128	-	74	62.745	ENSTSYG00000013854	ATXN2L	62	62.745	Carlito_syrichta
ENSXCOG00000001128	-	74	62.745	ENSCATG00000021354	ATXN2L	72	62.745	Cercocebus_atys
ENSXCOG00000001128	-	74	62.745	ENSCSAG00000006306	ATXN2L	67	62.745	Chlorocebus_sabaeus
ENSXCOG00000001128	-	78	49.573	ENSCPBG00000003859	ATXN2L	57	57.959	Chrysemys_picta_bellii
ENSXCOG00000001128	-	74	54.118	ENSCANG00000043625	ATXN2L	63	54.118	Colobus_angolensis_palliatus
ENSXCOG00000001128	-	74	62.353	ENSCGRG00001017114	Atxn2l	63	62.353	Cricetulus_griseus_chok1gshd
ENSXCOG00000001128	-	72	62.353	ENSCGRG00000001500	Atxn2l	65	62.353	Cricetulus_griseus_crigri
ENSXCOG00000001128	-	96	84.051	ENSCVAG00000015825	-	79	85.533	Cyprinodon_variegatus
ENSXCOG00000001128	-	79	62.745	ENSEASG00005014992	ATXN2L	67	62.745	Equus_asinus_asinus
ENSXCOG00000001128	-	99	57.033	ENSELUG00000023740	atxn2l	79	57.583	Esox_lucius
ENSXCOG00000001128	-	83	64.394	ENSELUG00000022915	-	70	63.706	Esox_lucius
ENSXCOG00000001128	-	62	74.554	ENSFHEG00000004491	-	67	80.612	Fundulus_heteroclitus
ENSXCOG00000001128	-	52	61.521	ENSGMOG00000006016	-	80	65.217	Gadus_morhua
ENSXCOG00000001128	-	66	96.078	ENSGAFG00000019364	-	74	96.078	Gambusia_affinis
ENSXCOG00000001128	-	99	78.667	ENSGACG00000007446	-	80	77.926	Gasterosteus_aculeatus
ENSXCOG00000001128	-	85	54.444	ENSGAGG00000006078	ATXN2L	64	60.932	Gopherus_agassizii
ENSXCOG00000001128	-	74	62.745	ENSGGOG00000014112	ATXN2L	68	59.608	Gorilla_gorilla
ENSXCOG00000001128	-	93	35.308	ENSGGOG00000036669	-	53	51.765	Gorilla_gorilla
ENSXCOG00000001128	-	98	80.206	ENSHBUG00000007997	-	80	79.949	Haplochromis_burtoni
ENSXCOG00000001128	-	92	68.266	ENSHCOG00000017587	-	99	67.362	Hippocampus_comes
ENSXCOG00000001128	-	99	59.314	ENSIPUG00000001761	atxn2l	74	60.459	Ictalurus_punctatus
ENSXCOG00000001128	-	99	80.108	ENSKMAG00000021450	-	80	82.796	Kryptolebias_marmoratus
ENSXCOG00000001128	-	99	77.238	ENSLBEG00000022720	-	79	78.772	Labrus_bergylta
ENSXCOG00000001128	-	74	62.745	ENSMFAG00000030590	ATXN2L	61	62.745	Macaca_fascicularis
ENSXCOG00000001128	-	74	62.745	ENSMMUG00000003298	ATXN2L	61	62.745	Macaca_mulatta
ENSXCOG00000001128	-	74	62.745	ENSMNEG00000032716	ATXN2L	66	62.745	Macaca_nemestrina
ENSXCOG00000001128	-	74	62.745	ENSMLEG00000034087	ATXN2L	66	62.745	Mandrillus_leucophaeus
ENSXCOG00000001128	-	96	79.692	ENSMAMG00000013005	-	76	80.206	Mastacembelus_armatus
ENSXCOG00000001128	-	74	68.539	ENSMAMG00000017977	atxn2l	74	55.838	Mastacembelus_armatus
ENSXCOG00000001128	-	98	80.206	ENSMZEG00005013869	-	78	79.949	Maylandia_zebra
ENSXCOG00000001128	-	80	62.353	ENSMAUG00000011753	Atxn2l	60	62.353	Mesocricetus_auratus
ENSXCOG00000001128	-	74	62.745	ENSMICG00000010608	ATXN2L	63	62.745	Microcebus_murinus
ENSXCOG00000001128	-	74	62.745	ENSMOCG00000020882	Atxn2l	65	62.745	Microtus_ochrogaster
ENSXCOG00000001128	-	95	79.301	ENSMMOG00000001440	-	86	78.465	Mola_mola
ENSXCOG00000001128	-	99	66.513	ENSMALG00000008430	-	95	63.991	Monopterus_albus
ENSXCOG00000001128	-	80	62.745	MGP_CAROLIEiJ_G0030450	Atxn2l	71	64.557	Mus_caroli
ENSXCOG00000001128	-	80	62.745	ENSMUSG00000032637	Atxn2l	71	64.557	Mus_musculus
ENSXCOG00000001128	-	80	62.745	MGP_PahariEiJ_G0013660	Atxn2l	70	62.745	Mus_pahari
ENSXCOG00000001128	-	80	62.745	MGP_SPRETEiJ_G0031564	Atxn2l	71	64.557	Mus_spretus
ENSXCOG00000001128	-	74	63.137	ENSMPUG00000012807	ATXN2L	71	63.137	Mustela_putorius_furo
ENSXCOG00000001128	-	74	61.961	ENSMLUG00000009877	ATXN2L	58	61.961	Myotis_lucifugus
ENSXCOG00000001128	-	80	62.745	ENSNLEG00000011004	ATXN2L	67	62.745	Nomascus_leucogenys
ENSXCOG00000001128	-	74	53.333	ENSOPRG00000002270	-	62	53.333	Ochotona_princeps
ENSXCOG00000001128	-	84	59.202	ENSONIG00000009388	atxn2l	70	68.846	Oreochromis_niloticus
ENSXCOG00000001128	-	99	80.720	ENSONIG00000011478	-	80	80.720	Oreochromis_niloticus
ENSXCOG00000001128	-	74	62.353	ENSOCUG00000002677	ATXN2L	72	62.353	Oryctolagus_cuniculus
ENSXCOG00000001128	-	98	78.517	ENSORLG00000006059	-	79	79.284	Oryzias_latipes
ENSXCOG00000001128	-	98	78.517	ENSORLG00020000991	-	79	79.284	Oryzias_latipes_hni
ENSXCOG00000001128	-	98	78.261	ENSORLG00015014174	-	79	78.772	Oryzias_latipes_hsok
ENSXCOG00000001128	-	98	78.261	ENSOMEG00000021118	-	98	67.677	Oryzias_melastigma
ENSXCOG00000001128	-	74	62.745	ENSOGAG00000012596	ATXN2L	60	62.745	Otolemur_garnettii
ENSXCOG00000001128	-	77	62.353	ENSOARG00000002503	ATXN2L	72	62.353	Ovis_aries
ENSXCOG00000001128	-	79	52.941	ENSPPAG00000036236	-	71	51.765	Pan_paniscus
ENSXCOG00000001128	-	74	63.137	ENSPPAG00000039107	ATXN2L	71	63.137	Pan_paniscus
ENSXCOG00000001128	-	74	63.137	ENSPTRG00000007938	ATXN2L	68	60.000	Pan_troglodytes
ENSXCOG00000001128	-	80	77.043	ENSPKIG00000018462	-	80	60.911	Paramormyrops_kingsleyae
ENSXCOG00000001128	-	79	58.725	ENSPSIG00000004866	ATXN2L	65	60.215	Pelodiscus_sinensis
ENSXCOG00000001128	-	85	78.328	ENSPMGG00000014821	-	91	77.946	Periophthalmus_magnuspinnatus
ENSXCOG00000001128	-	74	62.745	ENSPEMG00000019231	Atxn2l	63	62.745	Peromyscus_maniculatus_bairdii
ENSXCOG00000001128	-	99	88.608	ENSPFOG00000005935	-	81	90.102	Poecilia_formosa
ENSXCOG00000001128	-	99	88.354	ENSPLAG00000017094	-	82	89.848	Poecilia_latipinna
ENSXCOG00000001128	-	99	88.608	ENSPMEG00000017227	-	82	90.102	Poecilia_mexicana
ENSXCOG00000001128	-	99	89.114	ENSPREG00000023090	-	81	90.609	Poecilia_reticulata
ENSXCOG00000001128	-	74	62.745	ENSPPYG00000025917	ATXN2L	63	62.745	Pongo_abelii
ENSXCOG00000001128	-	74	62.745	ENSPCOG00000024791	ATXN2L	61	62.745	Propithecus_coquereli
ENSXCOG00000001128	-	57	52.941	ENSPVAG00000003958	ATXN2L	50	52.941	Pteropus_vampyrus
ENSXCOG00000001128	-	98	80.206	ENSPNYG00000017058	-	78	79.949	Pundamilia_nyererei
ENSXCOG00000001128	-	99	48.681	ENSPNYG00000012482	atxn2l	94	48.528	Pundamilia_nyererei
ENSXCOG00000001128	-	96	65.464	ENSPNAG00000023685	-	75	63.918	Pygocentrus_nattereri
ENSXCOG00000001128	-	99	59.591	ENSPNAG00000014538	atxn2l	85	60.697	Pygocentrus_nattereri
ENSXCOG00000001128	-	71	65.333	ENSRBIG00000036712	ATXN2L	69	65.333	Rhinopithecus_bieti
ENSXCOG00000001128	-	74	62.745	ENSRROG00000028547	ATXN2L	68	62.745	Rhinopithecus_roxellana
ENSXCOG00000001128	-	74	62.745	ENSSBOG00000025782	ATXN2L	68	62.745	Saimiri_boliviensis_boliviensis
ENSXCOG00000001128	-	99	60.411	ENSSFOG00015001018	atxn2l	78	60.207	Scleropages_formosus
ENSXCOG00000001128	-	95	78.141	ENSSMAG00000016932	-	79	78.141	Scophthalmus_maximus
ENSXCOG00000001128	-	85	48.921	ENSSMAG00000016365	atxn2l	67	66.160	Scophthalmus_maximus
ENSXCOG00000001128	-	99	81.330	ENSSDUG00000023014	-	82	81.841	Seriola_dumerili
ENSXCOG00000001128	-	77	86.640	ENSSLDG00000017701	-	74	86.235	Seriola_lalandi_dorsalis
ENSXCOG00000001128	-	73	60.976	ENSSARG00000009732	ATXN2L	63	60.976	Sorex_araneus
ENSXCOG00000001128	-	99	79.750	ENSSPAG00000008174	-	79	80.250	Stegastes_partitus
ENSXCOG00000001128	-	80	62.745	ENSSSCG00000021845	ATXN2L	70	62.745	Sus_scrofa
ENSXCOG00000001128	-	99	75.321	ENSTRUG00000007132	-	76	75.845	Takifugu_rubripes
ENSXCOG00000001128	-	74	62.745	ENSUMAG00000009437	ATXN2L	76	62.745	Ursus_maritimus
ENSXCOG00000001128	-	60	62.745	ENSVVUG00000024239	ATXN2L	72	62.745	Vulpes_vulpes
ENSXCOG00000001128	-	99	90.300	ENSXMAG00000010133	-	81	92.443	Xiphophorus_maculatus