EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001191 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2291 bases
Position: chrKQ557210.1:19091924-19094214
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001472	RRM_1	PF00076.22	8.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001495	-	276	-	ENSXCOP00000001472	91 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001191	-	82	37.333	ENSXCOG00000000492	-	60	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001191	-	89	70.370	ENSG00000076053	RBM7	66	70.370	Homo_sapiens
ENSXCOG00000001191	-	93	82.353	ENSACIG00000021769	-	91	82.353	Amphilophus_citrinellus
ENSXCOG00000001191	-	100	84.615	ENSATEG00000000596	-	97	84.615	Anabas_testudineus
ENSXCOG00000001191	-	93	66.279	ENSANAG00000031340	-	55	66.279	Aotus_nancymaae
ENSXCOG00000001191	-	88	70.000	ENSANAG00000031879	-	51	70.000	Aotus_nancymaae
ENSXCOG00000001191	-	88	70.000	ENSCJAG00000011949	-	53	70.000	Callithrix_jacchus
ENSXCOG00000001191	-	88	67.500	ENSCAFG00020002518	-	52	67.500	Canis_lupus_dingo
ENSXCOG00000001191	-	88	68.750	ENSCHOG00000012747	-	54	68.750	Choloepus_hoffmanni
ENSXCOG00000001191	-	89	58.025	ENSDORG00000000801	Rbm11	57	58.025	Dipodomys_ordii
ENSXCOG00000001191	-	89	61.728	ENSEBUG00000009746	rbm7	53	61.728	Eptatretus_burgeri
ENSXCOG00000001191	-	93	95.294	ENSFHEG00000000845	-	94	95.294	Fundulus_heteroclitus
ENSXCOG00000001191	-	89	70.370	ENSGGOG00000009941	-	60	70.370	Gorilla_gorilla
ENSXCOG00000001191	-	85	66.234	ENSHGLG00000003564	-	68	66.234	Heterocephalus_glaber_female
ENSXCOG00000001191	-	85	61.039	ENSHGLG00000013918	-	62	61.039	Heterocephalus_glaber_female
ENSXCOG00000001191	-	88	60.000	ENSHGLG00000014428	-	67	58.974	Heterocephalus_glaber_female
ENSXCOG00000001191	-	88	60.000	ENSHGLG00100011703	-	67	58.974	Heterocephalus_glaber_male
ENSXCOG00000001191	-	88	51.250	ENSHGLG00100008973	-	66	51.250	Heterocephalus_glaber_male
ENSXCOG00000001191	-	85	66.234	ENSHGLG00100001021	-	68	66.234	Heterocephalus_glaber_male
ENSXCOG00000001191	-	85	61.039	ENSHGLG00100015249	-	62	61.039	Heterocephalus_glaber_male
ENSXCOG00000001191	-	100	84.615	ENSHCOG00000010866	-	96	84.615	Hippocampus_comes
ENSXCOG00000001191	-	95	48.837	ENSIPUG00000018209	rbm11	91	48.837	Ictalurus_punctatus
ENSXCOG00000001191	-	86	89.744	ENSKMAG00000001899	-	84	89.744	Kryptolebias_marmoratus
ENSXCOG00000001191	-	88	68.750	ENSMAUG00000017938	-	52	68.750	Mesocricetus_auratus
ENSXCOG00000001191	-	92	71.111	ENSMMOG00000004967	rbm7	86	71.111	Mola_mola
ENSXCOG00000001191	-	88	68.750	ENSMUSG00000042396	Rbm7	51	68.750	Mus_musculus
ENSXCOG00000001191	-	88	68.750	ENSODEG00000010164	-	54	68.750	Octodon_degus
ENSXCOG00000001191	-	95	88.372	ENSPMGG00000001523	rbm7	97	88.372	Periophthalmus_magnuspinnatus
ENSXCOG00000001191	-	93	58.824	ENSPMAG00000001518	-	96	58.824	Petromyzon_marinus
ENSXCOG00000001191	-	88	58.750	ENSPCAG00000008368	-	56	58.750	Procavia_capensis
ENSXCOG00000001191	-	59	62.963	ENSPCOG00000022719	-	65	62.963	Propithecus_coquereli
ENSXCOG00000001191	-	81	51.351	ENSPNAG00000009243	rbm11	81	51.351	Pygocentrus_nattereri
ENSXCOG00000001191	-	92	51.190	ENSSFOG00015013138	rbm11	66	51.190	Scleropages_formosus
ENSXCOG00000001191	-	92	90.476	ENSSPAG00000019320	rbm7	66	85.714	Stegastes_partitus