EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001378 (Gene tree)
Gene ID: -
Gene Symbol: thoc3
Alias: zgc:100815
Full Name: THO complex 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3864 bases
Position: chrKQ557216.1:13113490-13117353
Accession: ZDB-GENE-040808-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001708	eIF2A	PF08662.11	1.1e-13	1	2
ENSXCOP00000001708	eIF2A	PF08662.11	1.1e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001733	-	969	-	ENSXCOP00000001708	322 (aa)	-	UPI0003B31855

Gene Model

Click here to download ENSXCOG00000001378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001378	thoc3	99	91.250	ENSG00000051596	THOC3	91	91.250	Homo_sapiens
ENSXCOG00000001378	thoc3	100	98.137	ENSAPOG00000010591	thoc3	100	98.137	Acanthochromis_polyacanthus
ENSXCOG00000001378	thoc3	99	91.250	ENSAMEG00000006936	THOC3	91	91.250	Ailuropoda_melanoleuca
ENSXCOG00000001378	thoc3	100	96.584	ENSACIG00000010364	thoc3	100	96.584	Amphilophus_citrinellus
ENSXCOG00000001378	thoc3	100	97.826	ENSAOCG00000013548	thoc3	100	97.826	Amphiprion_ocellaris
ENSXCOG00000001378	thoc3	100	97.826	ENSAPEG00000003216	thoc3	100	97.826	Amphiprion_percula
ENSXCOG00000001378	thoc3	100	98.137	ENSATEG00000017937	thoc3	100	98.137	Anabas_testudineus
ENSXCOG00000001378	thoc3	99	91.250	ENSANAG00000036291	THOC3	91	91.250	Aotus_nancymaae
ENSXCOG00000001378	thoc3	100	97.516	ENSACLG00000017219	thoc3	100	97.516	Astatotilapia_calliptera
ENSXCOG00000001378	thoc3	100	95.031	ENSAMXG00000010750	thoc3	100	95.031	Astyanax_mexicanus
ENSXCOG00000001378	thoc3	99	91.250	ENSBTAG00000035174	THOC3	91	91.250	Bos_taurus
ENSXCOG00000001378	thoc3	99	90.625	ENSCJAG00000046031	THOC3	86	90.625	Callithrix_jacchus
ENSXCOG00000001378	thoc3	99	91.250	ENSCAFG00000014320	THOC3	91	91.250	Canis_familiaris
ENSXCOG00000001378	thoc3	99	91.250	ENSCAFG00020011477	THOC3	91	91.250	Canis_lupus_dingo
ENSXCOG00000001378	thoc3	99	91.250	ENSCHIG00000021665	THOC3	91	91.250	Capra_hircus
ENSXCOG00000001378	thoc3	97	69.551	ENSTSYG00000009507	-	91	69.551	Carlito_syrichta
ENSXCOG00000001378	thoc3	99	68.025	ENSCPOG00000025805	THOC3	89	75.862	Cavia_porcellus
ENSXCOG00000001378	thoc3	99	91.250	ENSCATG00000029038	THOC3	91	91.250	Cercocebus_atys
ENSXCOG00000001378	thoc3	99	91.536	ENSCLAG00000015924	THOC3	91	91.536	Chinchilla_lanigera
ENSXCOG00000001378	thoc3	99	91.250	ENSCSAG00000009454	THOC3	91	91.250	Chlorocebus_sabaeus
ENSXCOG00000001378	thoc3	82	93.939	ENSCPBG00000022672	THOC3	81	93.939	Chrysemys_picta_bellii
ENSXCOG00000001378	thoc3	98	69.206	ENSCSAVG00000011041	-	99	69.206	Ciona_savignyi
ENSXCOG00000001378	thoc3	99	91.250	ENSCANG00000008964	THOC3	91	91.250	Colobus_angolensis_palliatus
ENSXCOG00000001378	thoc3	99	91.562	ENSCGRG00001022944	Thoc3	84	91.562	Cricetulus_griseus_chok1gshd
ENSXCOG00000001378	thoc3	99	91.562	ENSCGRG00000012133	Thoc3	91	91.562	Cricetulus_griseus_crigri
ENSXCOG00000001378	thoc3	100	97.826	ENSCVAG00000006941	thoc3	100	97.826	Cyprinodon_variegatus
ENSXCOG00000001378	thoc3	100	95.031	ENSDARG00000056517	thoc3	100	95.031	Danio_rerio
ENSXCOG00000001378	thoc3	99	91.562	ENSDNOG00000037214	THOC3	91	91.562	Dasypus_novemcinctus
ENSXCOG00000001378	thoc3	81	93.893	ENSDORG00000014084	Thoc3	89	93.893	Dipodomys_ordii
ENSXCOG00000001378	thoc3	98	64.127	FBgn0037569	tex	98	64.127	Drosophila_melanogaster
ENSXCOG00000001378	thoc3	99	90.625	ENSETEG00000020137	THOC3	91	90.625	Echinops_telfairi
ENSXCOG00000001378	thoc3	100	83.951	ENSEBUG00000004516	thoc3	100	83.951	Eptatretus_burgeri
ENSXCOG00000001378	thoc3	99	91.250	ENSEASG00005011970	THOC3	91	91.250	Equus_asinus_asinus
ENSXCOG00000001378	thoc3	99	91.250	ENSECAG00000011555	THOC3	91	91.250	Equus_caballus
ENSXCOG00000001378	thoc3	100	95.963	ENSELUG00000022058	thoc3	100	95.963	Esox_lucius
ENSXCOG00000001378	thoc3	99	92.500	ENSFALG00000008536	THOC3	94	92.500	Ficedula_albicollis
ENSXCOG00000001378	thoc3	99	91.536	ENSFDAG00000015062	THOC3	91	91.536	Fukomys_damarensis
ENSXCOG00000001378	thoc3	100	99.068	ENSFHEG00000019958	thoc3	100	99.068	Fundulus_heteroclitus
ENSXCOG00000001378	thoc3	100	95.342	ENSGMOG00000019136	-	100	95.342	Gadus_morhua
ENSXCOG00000001378	thoc3	98	91.483	ENSGALG00000024172	THOC3	83	91.483	Gallus_gallus
ENSXCOG00000001378	thoc3	100	99.379	ENSGAFG00000016531	thoc3	98	99.379	Gambusia_affinis
ENSXCOG00000001378	thoc3	100	97.516	ENSGACG00000016353	thoc3	100	97.516	Gasterosteus_aculeatus
ENSXCOG00000001378	thoc3	99	91.875	ENSGAGG00000013237	THOC3	99	91.875	Gopherus_agassizii
ENSXCOG00000001378	thoc3	99	91.250	ENSGGOG00000012127	-	91	91.250	Gorilla_gorilla
ENSXCOG00000001378	thoc3	100	97.516	ENSHBUG00000023812	thoc3	100	97.516	Haplochromis_burtoni
ENSXCOG00000001378	thoc3	99	91.250	ENSHGLG00000008773	THOC3	91	91.250	Heterocephalus_glaber_female
ENSXCOG00000001378	thoc3	99	91.250	ENSHGLG00100013354	THOC3	91	91.250	Heterocephalus_glaber_male
ENSXCOG00000001378	thoc3	100	90.373	ENSHCOG00000003522	thoc3	100	90.373	Hippocampus_comes
ENSXCOG00000001378	thoc3	100	94.410	ENSIPUG00000001292	thoc3	95	94.410	Ictalurus_punctatus
ENSXCOG00000001378	thoc3	99	90.625	ENSJJAG00000010704	Thoc3	91	90.625	Jaculus_jaculus
ENSXCOG00000001378	thoc3	100	97.205	ENSKMAG00000017815	thoc3	100	97.205	Kryptolebias_marmoratus
ENSXCOG00000001378	thoc3	100	97.205	ENSLBEG00000006512	thoc3	100	97.205	Labrus_bergylta
ENSXCOG00000001378	thoc3	100	92.547	ENSLACG00000014556	THOC3	100	92.547	Latimeria_chalumnae
ENSXCOG00000001378	thoc3	100	96.894	ENSLOCG00000011610	thoc3	99	96.894	Lepisosteus_oculatus
ENSXCOG00000001378	thoc3	99	91.250	ENSLAFG00000016609	THOC3	91	91.250	Loxodonta_africana
ENSXCOG00000001378	thoc3	99	91.250	ENSMFAG00000034476	THOC3	91	91.250	Macaca_fascicularis
ENSXCOG00000001378	thoc3	99	91.250	ENSMMUG00000018737	THOC3	91	91.250	Macaca_mulatta
ENSXCOG00000001378	thoc3	99	91.250	ENSMNEG00000043023	THOC3	91	91.250	Macaca_nemestrina
ENSXCOG00000001378	thoc3	99	91.250	ENSMLEG00000002508	THOC3	91	91.250	Mandrillus_leucophaeus
ENSXCOG00000001378	thoc3	100	97.516	ENSMAMG00000013229	thoc3	100	97.179	Mastacembelus_armatus
ENSXCOG00000001378	thoc3	100	97.516	ENSMZEG00005020327	thoc3	100	97.516	Maylandia_zebra
ENSXCOG00000001378	thoc3	82	95.057	ENSMGAG00000004766	THOC3	99	95.057	Meleagris_gallopavo
ENSXCOG00000001378	thoc3	99	91.562	ENSMAUG00000011225	Thoc3	91	91.562	Mesocricetus_auratus
ENSXCOG00000001378	thoc3	99	79.688	ENSMICG00000031354	-	91	79.688	Microcebus_murinus
ENSXCOG00000001378	thoc3	99	91.250	ENSMICG00000028441	-	91	91.250	Microcebus_murinus
ENSXCOG00000001378	thoc3	99	91.562	ENSMOCG00000015290	Thoc3	91	91.562	Microtus_ochrogaster
ENSXCOG00000001378	thoc3	100	97.205	ENSMMOG00000000373	thoc3	100	97.205	Mola_mola
ENSXCOG00000001378	thoc3	99	91.562	ENSMODG00000005339	THOC3	91	91.562	Monodelphis_domestica
ENSXCOG00000001378	thoc3	99	74.688	ENSMODG00000025275	-	97	74.688	Monodelphis_domestica
ENSXCOG00000001378	thoc3	100	96.584	ENSMALG00000002645	thoc3	100	96.584	Monopterus_albus
ENSXCOG00000001378	thoc3	99	91.562	MGP_CAROLIEiJ_G0018534	Thoc3	91	91.562	Mus_caroli
ENSXCOG00000001378	thoc3	99	91.562	ENSMUSG00000025872	Thoc3	91	91.562	Mus_musculus
ENSXCOG00000001378	thoc3	99	91.562	MGP_PahariEiJ_G0019599	Thoc3	91	91.562	Mus_pahari
ENSXCOG00000001378	thoc3	99	91.562	MGP_SPRETEiJ_G0019414	Thoc3	91	91.562	Mus_spretus
ENSXCOG00000001378	thoc3	85	89.781	ENSMPUG00000012598	THOC3	77	89.781	Mustela_putorius_furo
ENSXCOG00000001378	thoc3	99	87.500	ENSMLUG00000027411	-	93	87.500	Myotis_lucifugus
ENSXCOG00000001378	thoc3	99	85.312	ENSMLUG00000026903	-	93	85.312	Myotis_lucifugus
ENSXCOG00000001378	thoc3	99	91.562	ENSMLUG00000005412	-	91	91.562	Myotis_lucifugus
ENSXCOG00000001378	thoc3	99	91.562	ENSNGAG00000010934	-	91	91.562	Nannospalax_galili
ENSXCOG00000001378	thoc3	99	96.885	ENSNBRG00000013917	thoc3	93	96.885	Neolamprologus_brichardi
ENSXCOG00000001378	thoc3	99	90.938	ENSNLEG00000000593	THOC3	91	90.938	Nomascus_leucogenys
ENSXCOG00000001378	thoc3	98	70.347	ENSMEUG00000013439	-	98	70.347	Notamacropus_eugenii
ENSXCOG00000001378	thoc3	99	91.562	ENSMEUG00000001068	THOC3	91	91.562	Notamacropus_eugenii
ENSXCOG00000001378	thoc3	99	91.536	ENSODEG00000010186	THOC3	91	91.536	Octodon_degus
ENSXCOG00000001378	thoc3	100	97.516	ENSONIG00000004291	thoc3	100	97.516	Oreochromis_niloticus
ENSXCOG00000001378	thoc3	99	91.562	ENSOCUG00000016387	THOC3	91	91.562	Oryctolagus_cuniculus
ENSXCOG00000001378	thoc3	100	97.205	ENSORLG00000030384	thoc3	92	97.205	Oryzias_latipes
ENSXCOG00000001378	thoc3	100	97.205	ENSORLG00020016372	thoc3	100	97.205	Oryzias_latipes_hni
ENSXCOG00000001378	thoc3	100	97.205	ENSORLG00015000336	thoc3	100	97.205	Oryzias_latipes_hsok
ENSXCOG00000001378	thoc3	100	97.516	ENSOMEG00000021977	thoc3	100	97.516	Oryzias_melastigma
ENSXCOG00000001378	thoc3	99	91.250	ENSOGAG00000003503	THOC3	91	91.250	Otolemur_garnettii
ENSXCOG00000001378	thoc3	99	88.125	ENSOARG00000016600	THOC3	91	88.125	Ovis_aries
ENSXCOG00000001378	thoc3	99	91.250	ENSPPAG00000006020	THOC3	91	91.250	Pan_paniscus
ENSXCOG00000001378	thoc3	99	91.250	ENSPPRG00000020316	THOC3	91	91.250	Panthera_pardus
ENSXCOG00000001378	thoc3	81	93.893	ENSPTIG00000011325	THOC3	75	93.893	Panthera_tigris_altaica
ENSXCOG00000001378	thoc3	99	91.250	ENSPTRG00000017594	THOC3	91	91.250	Pan_troglodytes
ENSXCOG00000001378	thoc3	99	91.250	ENSPANG00000012114	THOC3	91	91.250	Papio_anubis
ENSXCOG00000001378	thoc3	100	95.342	ENSPKIG00000000208	thoc3	100	95.342	Paramormyrops_kingsleyae
ENSXCOG00000001378	thoc3	100	91.925	ENSPMGG00000017949	thoc3	100	91.925	Periophthalmus_magnuspinnatus
ENSXCOG00000001378	thoc3	99	91.562	ENSPEMG00000003118	Thoc3	91	91.562	Peromyscus_maniculatus_bairdii
ENSXCOG00000001378	thoc3	98	85.443	ENSPMAG00000007069	thoc3	98	85.443	Petromyzon_marinus
ENSXCOG00000001378	thoc3	100	100.000	ENSPFOG00000007685	thoc3	92	100.000	Poecilia_formosa
ENSXCOG00000001378	thoc3	100	100.000	ENSPLAG00000003581	thoc3	98	100.000	Poecilia_latipinna
ENSXCOG00000001378	thoc3	100	100.000	ENSPMEG00000005565	thoc3	98	100.000	Poecilia_mexicana
ENSXCOG00000001378	thoc3	100	100.000	ENSPREG00000014916	thoc3	92	100.000	Poecilia_reticulata
ENSXCOG00000001378	thoc3	99	91.250	ENSPPYG00000016066	THOC3	91	91.250	Pongo_abelii
ENSXCOG00000001378	thoc3	99	91.250	ENSPCOG00000023245	THOC3	91	91.250	Propithecus_coquereli
ENSXCOG00000001378	thoc3	99	90.938	ENSPVAG00000012450	THOC3	91	90.938	Pteropus_vampyrus
ENSXCOG00000001378	thoc3	100	97.516	ENSPNYG00000016612	thoc3	100	97.516	Pundamilia_nyererei
ENSXCOG00000001378	thoc3	100	95.652	ENSPNAG00000005252	thoc3	100	95.652	Pygocentrus_nattereri
ENSXCOG00000001378	thoc3	99	91.562	ENSRNOG00000000104	Thoc3	91	91.562	Rattus_norvegicus
ENSXCOG00000001378	thoc3	99	91.250	ENSRBIG00000039571	THOC3	91	91.250	Rhinopithecus_bieti
ENSXCOG00000001378	thoc3	99	91.250	ENSRROG00000031032	THOC3	91	91.250	Rhinopithecus_roxellana
ENSXCOG00000001378	thoc3	99	91.250	ENSSBOG00000022663	THOC3	91	91.250	Saimiri_boliviensis_boliviensis
ENSXCOG00000001378	thoc3	99	73.270	ENSSHAG00000013075	-	91	73.270	Sarcophilus_harrisii
ENSXCOG00000001378	thoc3	98	91.720	ENSSHAG00000010757	THOC3	88	91.720	Sarcophilus_harrisii
ENSXCOG00000001378	thoc3	100	95.652	ENSSFOG00015001867	thoc3	93	95.652	Scleropages_formosus
ENSXCOG00000001378	thoc3	100	97.205	ENSSMAG00000006786	thoc3	100	97.205	Scophthalmus_maximus
ENSXCOG00000001378	thoc3	100	97.516	ENSSDUG00000008924	thoc3	100	97.516	Seriola_dumerili
ENSXCOG00000001378	thoc3	100	97.516	ENSSLDG00000019128	thoc3	100	97.516	Seriola_lalandi_dorsalis
ENSXCOG00000001378	thoc3	99	92.212	ENSSPUG00000006652	THOC3	99	92.212	Sphenodon_punctatus
ENSXCOG00000001378	thoc3	100	97.826	ENSSPAG00000014229	thoc3	100	97.826	Stegastes_partitus
ENSXCOG00000001378	thoc3	99	91.250	ENSSSCG00000014061	THOC3	91	91.250	Sus_scrofa
ENSXCOG00000001378	thoc3	97	91.374	ENSTGUG00000000557	THOC3	99	91.374	Taeniopygia_guttata
ENSXCOG00000001378	thoc3	98	95.873	ENSTRUG00000002925	thoc3	91	95.873	Takifugu_rubripes
ENSXCOG00000001378	thoc3	100	94.410	ENSTNIG00000012958	thoc3	100	94.410	Tetraodon_nigroviridis
ENSXCOG00000001378	thoc3	81	93.893	ENSTTRG00000014865	THOC3	100	93.893	Tursiops_truncatus
ENSXCOG00000001378	thoc3	99	91.250	ENSUAMG00000010691	THOC3	91	91.250	Ursus_americanus
ENSXCOG00000001378	thoc3	99	91.250	ENSUMAG00000024511	THOC3	93	91.250	Ursus_maritimus
ENSXCOG00000001378	thoc3	99	86.957	ENSXETG00000022316	thoc3	99	86.957	Xenopus_tropicalis
ENSXCOG00000001378	thoc3	100	100.000	ENSXMAG00000003232	thoc3	98	100.000	Xiphophorus_maculatus