EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001406 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7698 bases
Position: chrKQ557205.1:1404246-1411943
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001746	DEAD	PF00270.29	1.1e-25	1	2
ENSXCOP00000001746	DEAD	PF00270.29	1.1e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001772	-	1305	-	ENSXCOP00000001746	434 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001406	-	74	34.771	ENSXCOG00000007417	eif4a2	92	34.771
ENSXCOG00000001406	-	57	32.812	ENSXCOG00000005756	ddx49	60	32.812
ENSXCOG00000001406	-	78	31.234	ENSXCOG00000007952	ddx20	51	31.234
ENSXCOG00000001406	-	79	31.830	ENSXCOG00000015586	DDX39A	93	31.830
ENSXCOG00000001406	-	75	33.422	ENSXCOG00000010824	eif4a3	90	33.422
ENSXCOG00000001406	-	71	32.249	ENSXCOG00000017749	ddx19	74	32.249
ENSXCOG00000001406	-	95	66.387	ENSXCOG00000008560	ddx6	98	66.387
ENSXCOG00000001406	-	72	40.741	ENSXCOG00000020327	-	52	40.741
ENSXCOG00000001406	-	68	32.676	ENSXCOG00000015334	zgc:193690	81	32.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001406	-	98	77.320	ENSAPOG00000014829	ddx61	99	77.320	Acanthochromis_polyacanthus
ENSXCOG00000001406	-	75	83.511	ENSAPOG00000023627	-	95	83.511	Acanthochromis_polyacanthus
ENSXCOG00000001406	-	100	75.714	ENSACIG00000018355	-	100	75.714	Amphilophus_citrinellus
ENSXCOG00000001406	-	100	82.688	ENSAOCG00000006269	-	100	83.265	Amphiprion_ocellaris
ENSXCOG00000001406	-	98	77.686	ENSAOCG00000007627	ddx61	99	77.686	Amphiprion_ocellaris
ENSXCOG00000001406	-	100	82.688	ENSAPEG00000021368	-	100	83.265	Amphiprion_percula
ENSXCOG00000001406	-	100	82.688	ENSAPEG00000020642	-	100	83.265	Amphiprion_percula
ENSXCOG00000001406	-	98	77.686	ENSAPEG00000007293	ddx61	99	77.686	Amphiprion_percula
ENSXCOG00000001406	-	98	77.339	ENSATEG00000011302	ddx61	99	77.339	Anabas_testudineus
ENSXCOG00000001406	-	100	82.041	ENSATEG00000005424	-	100	82.041	Anabas_testudineus
ENSXCOG00000001406	-	100	82.857	ENSACLG00000003260	-	100	82.857	Astatotilapia_calliptera
ENSXCOG00000001406	-	97	86.079	ENSACLG00000027620	ddx61	99	86.079	Astatotilapia_calliptera
ENSXCOG00000001406	-	99	78.296	ENSAMXG00000033980	-	100	78.296	Astyanax_mexicanus
ENSXCOG00000001406	-	95	78.419	ENSAMXG00000032542	ddx61	99	77.226	Astyanax_mexicanus
ENSXCOG00000001406	-	100	81.224	ENSCSEG00000009893	-	100	81.224	Cynoglossus_semilaevis
ENSXCOG00000001406	-	100	95.392	ENSCVAG00000011006	-	100	95.392	Cyprinodon_variegatus
ENSXCOG00000001406	-	98	77.178	ENSDARG00000018425	ddx61	99	77.178	Danio_rerio
ENSXCOG00000001406	-	98	87.731	ENSELUG00000020545	ddx61	97	87.731	Esox_lucius
ENSXCOG00000001406	-	98	88.235	ENSELUG00000022538	-	98	88.235	Esox_lucius
ENSXCOG00000001406	-	100	86.335	ENSFHEG00000015487	-	100	86.335	Fundulus_heteroclitus
ENSXCOG00000001406	-	62	71.733	ENSGMOG00000003561	-	100	71.865	Gadus_morhua
ENSXCOG00000001406	-	95	78.132	ENSGMOG00000013762	ddx61	99	77.292	Gadus_morhua
ENSXCOG00000001406	-	100	89.648	ENSGAFG00000015865	-	100	89.648	Gambusia_affinis
ENSXCOG00000001406	-	98	75.565	ENSGACG00000003401	ddx61	100	75.565	Gasterosteus_aculeatus
ENSXCOG00000001406	-	98	81.198	ENSGACG00000002413	-	100	80.785	Gasterosteus_aculeatus
ENSXCOG00000001406	-	97	77.500	ENSHBUG00000017832	ddx61	99	77.500	Haplochromis_burtoni
ENSXCOG00000001406	-	100	82.857	ENSHBUG00000017033	-	100	82.857	Haplochromis_burtoni
ENSXCOG00000001406	-	97	75.372	ENSHCOG00000008184	ddx61	98	75.372	Hippocampus_comes
ENSXCOG00000001406	-	100	77.347	ENSHCOG00000012238	-	100	77.347	Hippocampus_comes
ENSXCOG00000001406	-	95	76.674	ENSIPUG00000012823	DDX6	99	75.000	Ictalurus_punctatus
ENSXCOG00000001406	-	95	79.104	ENSIPUG00000008367	-	99	77.640	Ictalurus_punctatus
ENSXCOG00000001406	-	100	83.673	ENSKMAG00000007213	-	100	83.673	Kryptolebias_marmoratus
ENSXCOG00000001406	-	97	76.715	ENSLBEG00000001740	ddx61	99	76.715	Labrus_bergylta
ENSXCOG00000001406	-	100	89.286	ENSLBEG00000016890	-	100	89.955	Labrus_bergylta
ENSXCOG00000001406	-	95	77.004	ENSLACG00000015214	ddx61	98	77.004	Latimeria_chalumnae
ENSXCOG00000001406	-	98	50.115	ENSLOCG00000004352	ddx61	98	50.113	Lepisosteus_oculatus
ENSXCOG00000001406	-	100	91.855	ENSMAMG00000005559	-	100	91.855	Mastacembelus_armatus
ENSXCOG00000001406	-	98	77.963	ENSMAMG00000005321	ddx61	98	77.963	Mastacembelus_armatus
ENSXCOG00000001406	-	97	77.500	ENSMZEG00005003556	ddx61	99	77.500	Maylandia_zebra
ENSXCOG00000001406	-	100	82.857	ENSMZEG00005026268	-	100	82.857	Maylandia_zebra
ENSXCOG00000001406	-	100	91.156	ENSMMOG00000013694	-	100	91.156	Mola_mola
ENSXCOG00000001406	-	70	74.850	ENSMMOG00000008825	-	92	76.333	Mola_mola
ENSXCOG00000001406	-	95	77.825	ENSMMOG00000007415	ddx61	97	77.825	Mola_mola
ENSXCOG00000001406	-	100	82.041	ENSMALG00000013817	-	100	82.041	Monopterus_albus
ENSXCOG00000001406	-	97	66.804	ENSMALG00000013776	ddx61	97	66.804	Monopterus_albus
ENSXCOG00000001406	-	97	69.979	ENSNBRG00000015800	ddx61	100	69.979	Neolamprologus_brichardi
ENSXCOG00000001406	-	100	76.327	ENSNBRG00000015075	-	100	76.327	Neolamprologus_brichardi
ENSXCOG00000001406	-	100	83.061	ENSONIG00000013748	-	100	83.061	Oreochromis_niloticus
ENSXCOG00000001406	-	97	77.019	ENSONIG00000011418	ddx61	100	77.019	Oreochromis_niloticus
ENSXCOG00000001406	-	100	90.930	ENSORLG00000009178	-	100	90.930	Oryzias_latipes
ENSXCOG00000001406	-	100	91.383	ENSORLG00020015515	-	100	91.383	Oryzias_latipes_hni
ENSXCOG00000001406	-	100	91.156	ENSORLG00015006764	-	100	91.156	Oryzias_latipes_hsok
ENSXCOG00000001406	-	97	92.757	ENSOMEG00000022326	-	99	92.757	Oryzias_melastigma
ENSXCOG00000001406	-	95	90.094	ENSPKIG00000024264	ddx61	99	88.532	Paramormyrops_kingsleyae
ENSXCOG00000001406	-	100	72.074	ENSPMGG00000013355	-	100	72.074	Periophthalmus_magnuspinnatus
ENSXCOG00000001406	-	100	89.441	ENSPFOG00000005750	-	100	89.441	Poecilia_formosa
ENSXCOG00000001406	-	100	99.539	ENSPLAG00000000403	-	100	99.539	Poecilia_latipinna
ENSXCOG00000001406	-	100	89.027	ENSPMEG00000023737	-	100	89.027	Poecilia_mexicana
ENSXCOG00000001406	-	100	82.857	ENSPNYG00000003986	-	100	82.857	Pundamilia_nyererei
ENSXCOG00000001406	-	97	71.954	ENSPNYG00000015045	ddx61	99	71.954	Pundamilia_nyererei
ENSXCOG00000001406	-	98	79.588	ENSPNAG00000008742	-	98	79.588	Pygocentrus_nattereri
ENSXCOG00000001406	-	98	83.834	ENSPNAG00000024072	ddx61	99	83.834	Pygocentrus_nattereri
ENSXCOG00000001406	-	95	80.508	ENSSFOG00015021404	ddx61	99	78.659	Scleropages_formosus
ENSXCOG00000001406	-	95	77.350	ENSSMAG00000006591	ddx61	99	75.154	Scophthalmus_maximus
ENSXCOG00000001406	-	100	81.633	ENSSMAG00000001793	-	100	81.633	Scophthalmus_maximus
ENSXCOG00000001406	-	95	79.060	ENSSDUG00000009713	ddx61	97	78.243	Seriola_dumerili
ENSXCOG00000001406	-	100	91.855	ENSSDUG00000007530	-	100	91.855	Seriola_dumerili
ENSXCOG00000001406	-	100	91.855	ENSSLDG00000007608	-	100	91.855	Seriola_lalandi_dorsalis
ENSXCOG00000001406	-	95	78.891	ENSSLDG00000000132	ddx61	97	78.079	Seriola_lalandi_dorsalis
ENSXCOG00000001406	-	95	94.988	ENSSPAG00000013878	-	98	94.988	Stegastes_partitus
ENSXCOG00000001406	-	95	78.205	ENSSPAG00000001578	ddx61	99	77.226	Stegastes_partitus
ENSXCOG00000001406	-	99	77.710	ENSTRUG00000012432	-	99	78.296	Takifugu_rubripes
ENSXCOG00000001406	-	98	80.042	ENSTNIG00000003560	-	100	80.042	Tetraodon_nigroviridis
ENSXCOG00000001406	-	100	100.000	ENSXMAG00000016090	-	100	100.000	Xiphophorus_maculatus