EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5790 bases
Position: chrKQ557211.1:19842784-19848573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001914	HARE-HTH	PF05066.13	3e-22	1	1
ENSXCOP00000001909	HARE-HTH	PF05066.13	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001937	-	255	-	ENSXCOP00000001909	84 (aa)	-	-
ENSXCOT00000001942	-	285	-	ENSXCOP00000001914	94 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001543	-	89	58.621	ENSXCOG00000008255	-	91	58.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001543	-	79	70.667	ENSG00000171456	ASXL1	98	71.429	Homo_sapiens
ENSXCOG00000001543	-	77	68.056	ENSG00000141431	ASXL3	75	63.043	Homo_sapiens
ENSXCOG00000001543	-	89	57.471	ENSAPOG00000016599	-	84	57.471	Acanthochromis_polyacanthus
ENSXCOG00000001543	-	90	97.647	ENSACIG00000016887	-	100	97.647	Amphilophus_citrinellus
ENSXCOG00000001543	-	89	57.471	ENSACIG00000013802	-	70	57.471	Amphilophus_citrinellus
ENSXCOG00000001543	-	89	57.471	ENSAPEG00000014832	-	84	57.471	Amphiprion_percula
ENSXCOG00000001543	-	91	57.303	ENSATEG00000000035	-	81	57.303	Anabas_testudineus
ENSXCOG00000001543	-	79	88.406	ENSACAG00000012597	-	73	83.784	Anolis_carolinensis
ENSXCOG00000001543	-	88	67.857	ENSANAG00000032163	ASXL1	98	71.429	Aotus_nancymaae
ENSXCOG00000001543	-	88	66.667	ENSCJAG00000020708	ASXL1	98	69.643	Callithrix_jacchus
ENSXCOG00000001543	-	57	77.083	ENSCHIG00000016821	-	81	77.083	Capra_hircus
ENSXCOG00000001543	-	97	58.242	ENSCAPG00000016451	-	74	58.242	Cavia_aperea
ENSXCOG00000001543	-	88	67.857	ENSCCAG00000023224	ASXL1	98	71.429	Cebus_capucinus
ENSXCOG00000001543	-	78	70.270	ENSCATG00000034343	ASXL1	98	71.429	Cercocebus_atys
ENSXCOG00000001543	-	79	68.182	ENSCANG00000030372	ASXL1	98	71.429	Colobus_angolensis_palliatus
ENSXCOG00000001543	-	89	57.471	ENSCSEG00000004640	-	91	57.471	Cynoglossus_semilaevis
ENSXCOG00000001543	-	89	57.955	ENSCVAG00000011364	-	79	57.955	Cyprinodon_variegatus
ENSXCOG00000001543	-	89	64.103	ENSDORG00000028887	-	94	64.103	Dipodomys_ordii
ENSXCOG00000001543	-	81	69.118	ENSFDAG00000005632	-	79	69.118	Fukomys_damarensis
ENSXCOG00000001543	-	93	57.778	ENSGAFG00000014909	-	94	57.778	Gambusia_affinis
ENSXCOG00000001543	-	85	62.821	ENSGGOG00000003328	ASXL1	98	71.429	Gorilla_gorilla
ENSXCOG00000001543	-	94	67.045	ENSHGLG00000017863	-	87	67.045	Heterocephalus_glaber_female
ENSXCOG00000001543	-	90	98.824	ENSHCOG00000012992	-	52	98.824	Hippocampus_comes
ENSXCOG00000001543	-	91	57.303	ENSHCOG00000013253	-	80	57.303	Hippocampus_comes
ENSXCOG00000001543	-	89	58.621	ENSJJAG00000021569	-	92	58.621	Jaculus_jaculus
ENSXCOG00000001543	-	89	58.621	ENSKMAG00000013765	-	97	58.621	Kryptolebias_marmoratus
ENSXCOG00000001543	-	89	57.471	ENSLBEG00000012396	-	90	57.471	Labrus_bergylta
ENSXCOG00000001543	-	78	70.270	ENSMFAG00000029400	ASXL1	98	71.429	Macaca_fascicularis
ENSXCOG00000001543	-	77	68.056	ENSMMUG00000014451	ASXL3	51	48.684	Macaca_mulatta
ENSXCOG00000001543	-	78	71.233	ENSMMUG00000007117	ASXL1	98	71.429	Macaca_mulatta
ENSXCOG00000001543	-	85	61.538	ENSMNEG00000031201	ASXL1	98	71.429	Macaca_nemestrina
ENSXCOG00000001543	-	83	64.103	ENSMLEG00000024749	ASXL1	98	71.429	Mandrillus_leucophaeus
ENSXCOG00000001543	-	89	57.471	ENSMAMG00000008791	-	99	57.471	Mastacembelus_armatus
ENSXCOG00000001543	-	89	69.048	ENSMAUG00000000537	-	61	69.048	Mesocricetus_auratus
ENSXCOG00000001543	-	89	69.048	ENSMOCG00000014066	-	99	69.048	Microtus_ochrogaster
ENSXCOG00000001543	-	91	57.303	ENSMMOG00000017515	-	95	57.303	Mola_mola
ENSXCOG00000001543	-	75	90.476	ENSMMOG00000011196	-	85	90.476	Mola_mola
ENSXCOG00000001543	-	89	57.471	ENSMALG00000021361	-	84	57.471	Monopterus_albus
ENSXCOG00000001543	-	68	98.246	ENSMALG00000020971	-	100	98.246	Monopterus_albus
ENSXCOG00000001543	-	88	91.667	MGP_CAROLIEiJ_G0017573	Asxl2	53	92.727	Mus_caroli
ENSXCOG00000001543	-	88	91.667	ENSMUSG00000037486	Asxl2	53	92.727	Mus_musculus
ENSXCOG00000001543	-	88	92.771	MGP_SPRETEiJ_G0018417	Asxl2	53	92.727	Mus_spretus
ENSXCOG00000001543	-	81	67.647	ENSNGAG00000020297	-	85	67.647	Nannospalax_galili
ENSXCOG00000001543	-	89	58.621	ENSNBRG00000021565	-	93	58.621	Neolamprologus_brichardi
ENSXCOG00000001543	-	85	62.821	ENSNLEG00000009794	ASXL1	98	71.429	Nomascus_leucogenys
ENSXCOG00000001543	-	98	65.217	ENSODEG00000012381	-	88	65.217	Octodon_degus
ENSXCOG00000001543	-	89	58.621	ENSORLG00000027477	-	98	58.621	Oryzias_latipes
ENSXCOG00000001543	-	74	90.323	ENSORLG00000028046	-	100	90.323	Oryzias_latipes
ENSXCOG00000001543	-	89	58.621	ENSORLG00020003431	-	98	58.621	Oryzias_latipes_hni
ENSXCOG00000001543	-	89	58.621	ENSORLG00015017723	-	98	58.621	Oryzias_latipes_hsok
ENSXCOG00000001543	-	89	86.667	ENSORLG00015003122	-	99	78.652	Oryzias_latipes_hsok
ENSXCOG00000001543	-	89	58.621	ENSOMEG00000011176	-	68	58.621	Oryzias_melastigma
ENSXCOG00000001543	-	85	62.821	ENSPPAG00000028038	ASXL1	98	71.429	Pan_paniscus
ENSXCOG00000001543	-	76	69.231	ENSPTIG00000008552	-	92	62.500	Panthera_tigris_altaica
ENSXCOG00000001543	-	78	70.270	ENSPTRG00000013377	ASXL1	98	71.429	Pan_troglodytes
ENSXCOG00000001543	-	80	70.149	ENSPANG00000025544	ASXL1	98	71.429	Papio_anubis
ENSXCOG00000001543	-	91	95.349	ENSPMGG00000024122	-	99	95.349	Periophthalmus_magnuspinnatus
ENSXCOG00000001543	-	93	57.778	ENSPMGG00000017948	-	88	57.778	Periophthalmus_magnuspinnatus
ENSXCOG00000001543	-	89	58.621	ENSPLAG00000004055	-	91	58.621	Poecilia_latipinna
ENSXCOG00000001543	-	89	58.621	ENSPMEG00000000899	-	84	58.621	Poecilia_mexicana
ENSXCOG00000001543	-	90	100.000	ENSPREG00000014267	-	100	100.000	Poecilia_reticulata
ENSXCOG00000001543	-	89	58.621	ENSPREG00000008490	-	87	58.621	Poecilia_reticulata
ENSXCOG00000001543	-	79	69.333	ENSRBIG00000038437	-	98	71.429	Rhinopithecus_bieti
ENSXCOG00000001543	-	79	68.182	ENSRROG00000000172	ASXL1	98	71.429	Rhinopithecus_roxellana
ENSXCOG00000001543	-	80	66.176	ENSSBOG00000023781	ASXL1	98	71.429	Saimiri_boliviensis_boliviensis
ENSXCOG00000001543	-	99	55.670	ENSSFOG00015020389	-	78	55.670	Scleropages_formosus
ENSXCOG00000001543	-	93	58.889	ENSSMAG00000003213	-	88	58.889	Scophthalmus_maximus
ENSXCOG00000001543	-	97	55.319	ENSSDUG00000000824	-	64	55.319	Seriola_dumerili
ENSXCOG00000001543	-	97	55.319	ENSSLDG00000024673	-	60	55.319	Seriola_lalandi_dorsalis
ENSXCOG00000001543	-	65	69.643	ENSSPUG00000018911	-	100	69.643	Sphenodon_punctatus
ENSXCOG00000001543	-	79	93.939	ENSTGUG00000014522	-	100	93.939	Taeniopygia_guttata
ENSXCOG00000001543	-	89	58.621	ENSTRUG00000021192	-	90	58.621	Takifugu_rubripes
ENSXCOG00000001543	-	79	71.212	ENSUAMG00000023398	-	84	65.789	Ursus_americanus
ENSXCOG00000001543	-	73	53.968	ENSUAMG00000019013	-	89	53.968	Ursus_americanus
ENSXCOG00000001543	-	89	58.621	ENSXMAG00000024079	-	91	58.621	Xiphophorus_maculatus