EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001548 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1913 bases
Position: chrKQ557223.1:9065522-9067434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001917	PABP	PF00658.18	1.6e-33	1	2
ENSXCOP00000001917	PABP	PF00658.18	1.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001945	-	582	-	ENSXCOP00000001917	193 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001548	-	97	64.486	ENSAPOG00000023881	-	100	64.486	Acanthochromis_polyacanthus
ENSXCOG00000001548	-	97	64.019	ENSAOCG00000019884	-	100	64.019	Amphiprion_ocellaris
ENSXCOG00000001548	-	97	63.551	ENSAPEG00000020987	-	100	63.551	Amphiprion_percula
ENSXCOG00000001548	-	96	62.441	ENSATEG00000013831	-	99	62.441	Anabas_testudineus
ENSXCOG00000001548	-	97	62.911	ENSACLG00000027916	-	99	62.911	Astatotilapia_calliptera
ENSXCOG00000001548	-	97	49.065	ENSAMXG00000041484	-	99	49.065	Astyanax_mexicanus
ENSXCOG00000001548	-	69	75.940	ENSCSEG00000001317	-	97	75.940	Cynoglossus_semilaevis
ENSXCOG00000001548	-	98	65.741	ENSCVAG00000000578	-	100	66.204	Cyprinodon_variegatus
ENSXCOG00000001548	-	97	54.930	ENSELUG00000001731	-	82	54.930	Esox_lucius
ENSXCOG00000001548	-	98	67.130	ENSFHEG00000007741	-	100	67.130	Fundulus_heteroclitus
ENSXCOG00000001548	-	82	69.318	ENSGAFG00000012983	-	67	69.318	Gambusia_affinis
ENSXCOG00000001548	-	97	62.381	ENSHBUG00000000185	-	60	62.381	Haplochromis_burtoni
ENSXCOG00000001548	-	99	53.241	ENSHCOG00000003117	-	100	53.241	Hippocampus_comes
ENSXCOG00000001548	-	100	68.571	ENSKMAG00000011397	-	99	68.571	Kryptolebias_marmoratus
ENSXCOG00000001548	-	99	62.212	ENSLBEG00000027847	-	97	62.212	Labrus_bergylta
ENSXCOG00000001548	-	65	57.364	ENSLOCG00000003085	-	86	57.246	Lepisosteus_oculatus
ENSXCOG00000001548	-	97	65.421	ENSMAMG00000017628	-	100	65.421	Mastacembelus_armatus
ENSXCOG00000001548	-	93	59.322	ENSMMOG00000004490	-	89	59.322	Mola_mola
ENSXCOG00000001548	-	96	63.507	ENSMALG00000004586	-	99	63.981	Monopterus_albus
ENSXCOG00000001548	-	93	61.932	ENSNBRG00000006752	-	74	61.932	Neolamprologus_brichardi
ENSXCOG00000001548	-	92	49.000	ENSPKIG00000005307	-	97	50.000	Paramormyrops_kingsleyae
ENSXCOG00000001548	-	96	58.046	ENSPMGG00000004590	-	98	58.046	Periophthalmus_magnuspinnatus
ENSXCOG00000001548	-	98	74.419	ENSPFOG00000023453	-	100	74.419	Poecilia_formosa
ENSXCOG00000001548	-	98	74.537	ENSPLAG00000003198	-	100	74.537	Poecilia_latipinna
ENSXCOG00000001548	-	95	77.301	ENSPMEG00000022008	-	67	77.301	Poecilia_mexicana
ENSXCOG00000001548	-	100	81.773	ENSPREG00000001981	-	100	81.773	Poecilia_reticulata
ENSXCOG00000001548	-	84	60.366	ENSPNYG00000004740	-	86	60.366	Pundamilia_nyererei
ENSXCOG00000001548	-	82	39.267	ENSPNAG00000018692	-	73	39.267	Pygocentrus_nattereri
ENSXCOG00000001548	-	96	51.887	ENSSFOG00015001322	-	95	51.887	Scleropages_formosus
ENSXCOG00000001548	-	98	63.158	ENSSMAG00000008778	-	98	63.636	Scophthalmus_maximus
ENSXCOG00000001548	-	98	65.116	ENSSDUG00000015116	-	100	65.581	Seriola_dumerili
ENSXCOG00000001548	-	98	64.186	ENSSLDG00000000425	-	100	64.651	Seriola_lalandi_dorsalis
ENSXCOG00000001548	-	97	66.355	ENSSPAG00000015141	-	100	66.355	Stegastes_partitus
ENSXCOG00000001548	-	98	59.447	ENSTRUG00000021899	-	99	59.447	Takifugu_rubripes
ENSXCOG00000001548	-	97	54.673	ENSTNIG00000002576	-	99	54.673	Tetraodon_nigroviridis
ENSXCOG00000001548	-	98	78.241	ENSXMAG00000021863	-	100	78.241	Xiphophorus_maculatus