EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001570 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5640 bases
Position: chrKQ557207.1:6016908-6022547
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001954	RRM_1	PF00076.22	4.1e-32	1	2
ENSXCOP00000001954	RRM_1	PF00076.22	4.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000001982	-	882	-	ENSXCOP00000001954	293 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001570	srsf5b	62	54.945	ENSXCOG00000003212	-	73	48.689
ENSXCOG00000001570	srsf5b	59	48.066	ENSXCOG00000017888	-	68	50.000
ENSXCOG00000001570	srsf5b	61	43.243	ENSXCOG00000009643	-	72	40.513
ENSXCOG00000001570	srsf5b	62	65.193	ENSXCOG00000018826	srsf4	89	62.295
ENSXCOG00000001570	srsf5b	63	67.742	ENSXCOG00000015338	srsf5a	92	54.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001570	srsf5b	89	90.741	ENSAPOG00000008642	srsf5b	92	84.815	Acanthochromis_polyacanthus
ENSXCOG00000001570	srsf5b	93	66.423	ENSAMEG00000014574	SRSF5	96	64.312	Ailuropoda_melanoleuca
ENSXCOG00000001570	srsf5b	100	88.119	ENSACIG00000010742	srsf5b	98	85.769	Amphilophus_citrinellus
ENSXCOG00000001570	srsf5b	89	90.370	ENSAOCG00000005719	srsf5b	92	84.444	Amphiprion_ocellaris
ENSXCOG00000001570	srsf5b	89	90.370	ENSAPEG00000007830	srsf5b	92	84.444	Amphiprion_percula
ENSXCOG00000001570	srsf5b	89	89.259	ENSATEG00000019112	srsf5b	92	82.593	Anabas_testudineus
ENSXCOG00000001570	srsf5b	88	63.320	ENSAPLG00000014681	SRSF5	96	64.599	Anas_platyrhynchos
ENSXCOG00000001570	srsf5b	63	84.409	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSXCOG00000001570	srsf5b	100	88.119	ENSACLG00000026424	srsf5b	92	84.815	Astatotilapia_calliptera
ENSXCOG00000001570	srsf5b	99	71.821	ENSAMXG00000011932	srsf5b	84	93.798	Astyanax_mexicanus
ENSXCOG00000001570	srsf5b	93	66.423	ENSBTAG00000011596	SRSF5	96	64.312	Bos_taurus
ENSXCOG00000001570	srsf5b	93	66.423	ENSCAFG00000016589	SRSF5	96	64.312	Canis_familiaris
ENSXCOG00000001570	srsf5b	93	66.423	ENSCAFG00020005661	SRSF5	96	64.312	Canis_lupus_dingo
ENSXCOG00000001570	srsf5b	93	64.599	ENSCHIG00000016794	SRSF5	95	64.312	Capra_hircus
ENSXCOG00000001570	srsf5b	63	84.409	ENSTSYG00000007786	SRSF5	94	72.727	Carlito_syrichta
ENSXCOG00000001570	srsf5b	63	84.409	ENSCAPG00000008801	SRSF5	91	67.969	Cavia_aperea
ENSXCOG00000001570	srsf5b	63	84.409	ENSCPOG00000039926	SRSF5	91	68.359	Cavia_porcellus
ENSXCOG00000001570	srsf5b	63	84.409	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSXCOG00000001570	srsf5b	63	84.409	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSXCOG00000001570	srsf5b	63	84.409	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSXCOG00000001570	srsf5b	92	66.176	ENSCGRG00000009833	Srsf5	96	66.418	Cricetulus_griseus_crigri
ENSXCOG00000001570	srsf5b	81	89.069	ENSCSEG00000003801	srsf5b	91	81.273	Cynoglossus_semilaevis
ENSXCOG00000001570	srsf5b	89	84.138	ENSCVAG00000017240	srsf5b	88	81.944	Cyprinodon_variegatus
ENSXCOG00000001570	srsf5b	63	94.086	ENSDARG00000027734	srsf5b	90	93.023	Danio_rerio
ENSXCOG00000001570	srsf5b	92	66.667	ENSDNOG00000006160	SRSF5	96	65.789	Dasypus_novemcinctus
ENSXCOG00000001570	srsf5b	63	78.919	ENSETEG00000020396	SRSF5	93	65.116	Echinops_telfairi
ENSXCOG00000001570	srsf5b	65	62.564	ENSEBUG00000006229	srsf5b	89	52.632	Eptatretus_burgeri
ENSXCOG00000001570	srsf5b	93	66.423	ENSEASG00005016615	SRSF5	96	64.312	Equus_asinus_asinus
ENSXCOG00000001570	srsf5b	93	66.423	ENSECAG00000026873	SRSF5	96	69.517	Equus_caballus
ENSXCOG00000001570	srsf5b	89	72.368	ENSELUG00000019852	srsf5b	85	86.111	Esox_lucius
ENSXCOG00000001570	srsf5b	93	66.423	ENSFCAG00000008848	SRSF5	75	90.667	Felis_catus
ENSXCOG00000001570	srsf5b	63	81.622	ENSFALG00000004979	SRSF5	94	68.605	Ficedula_albicollis
ENSXCOG00000001570	srsf5b	63	84.409	ENSFDAG00000011562	SRSF5	92	73.725	Fukomys_damarensis
ENSXCOG00000001570	srsf5b	89	89.416	ENSFHEG00000009476	srsf5b	88	85.294	Fundulus_heteroclitus
ENSXCOG00000001570	srsf5b	65	80.531	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSXCOG00000001570	srsf5b	63	81.081	ENSGALG00000009421	SRSF5	94	73.930	Gallus_gallus
ENSXCOG00000001570	srsf5b	100	94.040	ENSGAFG00000002865	srsf5b	100	90.066	Gambusia_affinis
ENSXCOG00000001570	srsf5b	100	60.169	ENSGACG00000007834	srsf5b	86	88.235	Gasterosteus_aculeatus
ENSXCOG00000001570	srsf5b	63	84.409	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSXCOG00000001570	srsf5b	100	87.789	ENSHBUG00000012462	srsf5b	93	99.225	Haplochromis_burtoni
ENSXCOG00000001570	srsf5b	92	65.809	ENSHGLG00000010147	SRSF5	96	64.419	Heterocephalus_glaber_female
ENSXCOG00000001570	srsf5b	61	59.444	ENSHGLG00100000095	-	62	59.116	Heterocephalus_glaber_male
ENSXCOG00000001570	srsf5b	92	65.809	ENSHGLG00100015328	SRSF5	96	64.419	Heterocephalus_glaber_male
ENSXCOG00000001570	srsf5b	65	89.062	ENSHCOG00000005592	srsf5b	91	70.909	Hippocampus_comes
ENSXCOG00000001570	srsf5b	92	66.176	ENSSTOG00000020672	SRSF5	96	64.794	Ictidomys_tridecemlineatus
ENSXCOG00000001570	srsf5b	93	66.423	ENSJJAG00000001688	Srsf5	96	64.312	Jaculus_jaculus
ENSXCOG00000001570	srsf5b	89	91.852	ENSKMAG00000020486	srsf5b	84	96.899	Kryptolebias_marmoratus
ENSXCOG00000001570	srsf5b	89	88.561	ENSLBEG00000013647	srsf5b	92	83.026	Labrus_bergylta
ENSXCOG00000001570	srsf5b	92	68.401	ENSLACG00000005874	SRSF5	92	71.094	Latimeria_chalumnae
ENSXCOG00000001570	srsf5b	63	86.842	ENSLOCG00000012438	srsf5b	94	72.624	Lepisosteus_oculatus
ENSXCOG00000001570	srsf5b	63	83.871	ENSLAFG00000005260	SRSF5	92	66.537	Loxodonta_africana
ENSXCOG00000001570	srsf5b	63	84.409	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSXCOG00000001570	srsf5b	63	84.409	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSXCOG00000001570	srsf5b	63	84.409	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSXCOG00000001570	srsf5b	83	87.698	ENSMAMG00000002673	srsf5b	92	82.963	Mastacembelus_armatus
ENSXCOG00000001570	srsf5b	100	88.119	ENSMZEG00005003550	srsf5b	92	84.815	Maylandia_zebra
ENSXCOG00000001570	srsf5b	50	76.712	ENSMGAG00000011835	SRSF5	92	69.725	Meleagris_gallopavo
ENSXCOG00000001570	srsf5b	92	66.176	ENSMAUG00000009544	Srsf5	96	64.794	Mesocricetus_auratus
ENSXCOG00000001570	srsf5b	92	66.176	ENSMOCG00000013134	Srsf5	96	64.794	Microtus_ochrogaster
ENSXCOG00000001570	srsf5b	63	93.011	ENSMMOG00000000137	srsf5b	80	95.420	Mola_mola
ENSXCOG00000001570	srsf5b	89	88.971	ENSMALG00000021875	srsf5b	84	99.225	Monopterus_albus
ENSXCOG00000001570	srsf5b	92	66.176	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSXCOG00000001570	srsf5b	92	66.176	MGP_PahariEiJ_G0029659	Srsf5	96	66.418	Mus_pahari
ENSXCOG00000001570	srsf5b	93	66.423	ENSMPUG00000007458	SRSF5	96	64.312	Mustela_putorius_furo
ENSXCOG00000001570	srsf5b	94	68.841	ENSMLUG00000011939	SRSF5	96	68.478	Myotis_lucifugus
ENSXCOG00000001570	srsf5b	92	66.176	ENSNGAG00000010073	-	96	64.794	Nannospalax_galili
ENSXCOG00000001570	srsf5b	100	88.411	ENSNBRG00000001285	srsf5b	92	84.387	Neolamprologus_brichardi
ENSXCOG00000001570	srsf5b	63	84.409	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSXCOG00000001570	srsf5b	62	92.857	ENSMEUG00000001521	SRSF5	66	92.857	Notamacropus_eugenii
ENSXCOG00000001570	srsf5b	63	84.409	ENSODEG00000013469	-	92	68.898	Octodon_degus
ENSXCOG00000001570	srsf5b	63	80.645	ENSODEG00000000700	-	93	66.537	Octodon_degus
ENSXCOG00000001570	srsf5b	100	88.119	ENSONIG00000005759	srsf5b	92	84.815	Oreochromis_niloticus
ENSXCOG00000001570	srsf5b	63	79.032	ENSOANG00000013336	SRSF5	93	64.202	Ornithorhynchus_anatinus
ENSXCOG00000001570	srsf5b	63	84.409	ENSOCUG00000009274	SRSF5	90	67.578	Oryctolagus_cuniculus
ENSXCOG00000001570	srsf5b	89	77.441	ENSORLG00000029854	srsf5b	92	77.441	Oryzias_latipes
ENSXCOG00000001570	srsf5b	89	87.823	ENSORLG00015001720	srsf5b	92	82.288	Oryzias_latipes_hsok
ENSXCOG00000001570	srsf5b	90	87.546	ENSOMEG00000020690	srsf5b	67	81.111	Oryzias_melastigma
ENSXCOG00000001570	srsf5b	92	65.074	ENSOGAG00000015122	SRSF5	96	64.794	Otolemur_garnettii
ENSXCOG00000001570	srsf5b	63	84.409	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSXCOG00000001570	srsf5b	93	66.423	ENSPPRG00000012903	SRSF5	75	90.667	Panthera_pardus
ENSXCOG00000001570	srsf5b	93	66.423	ENSPTIG00000018589	SRSF5	75	90.667	Panthera_tigris_altaica
ENSXCOG00000001570	srsf5b	63	84.409	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSXCOG00000001570	srsf5b	63	84.409	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSXCOG00000001570	srsf5b	65	61.421	ENSPMAG00000007790	srsf5b	88	53.704	Petromyzon_marinus
ENSXCOG00000001570	srsf5b	100	96.026	ENSPFOG00000017700	srsf5b	100	96.026	Poecilia_formosa
ENSXCOG00000001570	srsf5b	100	96.358	ENSPLAG00000006480	srsf5b	100	96.358	Poecilia_latipinna
ENSXCOG00000001570	srsf5b	100	96.026	ENSPMEG00000012751	srsf5b	100	96.026	Poecilia_mexicana
ENSXCOG00000001570	srsf5b	100	94.040	ENSPREG00000010381	srsf5b	100	90.066	Poecilia_reticulata
ENSXCOG00000001570	srsf5b	52	80.519	ENSPCAG00000004405	SRSF5	100	79.085	Procavia_capensis
ENSXCOG00000001570	srsf5b	92	66.176	ENSPCOG00000014442	SRSF5	88	75.969	Propithecus_coquereli
ENSXCOG00000001570	srsf5b	71	90.769	ENSPVAG00000009828	SRSF5	75	90.769	Pteropus_vampyrus
ENSXCOG00000001570	srsf5b	100	90.203	ENSPNYG00000002669	srsf5b	94	99.225	Pundamilia_nyererei
ENSXCOG00000001570	srsf5b	91	74.532	ENSPNAG00000011262	srsf5b	84	93.023	Pygocentrus_nattereri
ENSXCOG00000001570	srsf5b	63	84.409	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSXCOG00000001570	srsf5b	63	84.409	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSXCOG00000001570	srsf5b	63	84.409	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSXCOG00000001570	srsf5b	90	79.195	ENSSMAG00000019728	srsf5b	91	74.237	Scophthalmus_maximus
ENSXCOG00000001570	srsf5b	86	87.786	ENSSDUG00000005766	srsf5b	92	83.588	Seriola_dumerili
ENSXCOG00000001570	srsf5b	89	87.778	ENSSLDG00000023255	srsf5b	84	98.450	Seriola_lalandi_dorsalis
ENSXCOG00000001570	srsf5b	63	70.811	ENSSARG00000001059	SRSF5	92	57.977	Sorex_araneus
ENSXCOG00000001570	srsf5b	90	62.963	ENSSPUG00000002464	SRSF5	89	73.188	Sphenodon_punctatus
ENSXCOG00000001570	srsf5b	89	90.741	ENSSPAG00000015325	srsf5b	92	84.815	Stegastes_partitus
ENSXCOG00000001570	srsf5b	93	66.423	ENSSSCG00000032583	SRSF5	96	64.312	Sus_scrofa
ENSXCOG00000001570	srsf5b	63	81.622	ENSTGUG00000011425	SRSF5	94	68.992	Taeniopygia_guttata
ENSXCOG00000001570	srsf5b	65	90.476	ENSTRUG00000017811	srsf5b	95	69.565	Takifugu_rubripes
ENSXCOG00000001570	srsf5b	91	78.229	ENSTNIG00000016411	srsf5b	95	76.981	Tetraodon_nigroviridis
ENSXCOG00000001570	srsf5b	67	78.788	ENSTBEG00000001972	SRSF5	92	64.259	Tupaia_belangeri
ENSXCOG00000001570	srsf5b	93	64.469	ENSTTRG00000003318	SRSF5	95	64.179	Tursiops_truncatus
ENSXCOG00000001570	srsf5b	93	66.423	ENSUAMG00000014184	SRSF5	96	64.312	Ursus_americanus
ENSXCOG00000001570	srsf5b	53	83.226	ENSUMAG00000009827	SRSF5	96	69.517	Ursus_maritimus
ENSXCOG00000001570	srsf5b	92	66.176	ENSVPAG00000006448	SRSF5	96	64.794	Vicugna_pacos
ENSXCOG00000001570	srsf5b	93	66.423	ENSVVUG00000003790	SRSF5	96	64.312	Vulpes_vulpes
ENSXCOG00000001570	srsf5b	64	83.511	ENSXETG00000002211	srsf5	94	67.816	Xenopus_tropicalis
ENSXCOG00000001570	srsf5b	100	96.689	ENSXMAG00000026416	srsf5b	100	96.689	Xiphophorus_maculatus