EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001611 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2616 bases
Position: chrKQ557216.1:13394935-13397550
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000001998	RNase_H2_suC	PF08615.11	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000002028	-	408	-	ENSXCOP00000001998	135 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001611	rnaseh2c	100	83.088	ENSAPOG00000012901	rnaseh2c	99	83.088	Acanthochromis_polyacanthus
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSACIG00000022433	rnaseh2c	100	76.471	Amphilophus_citrinellus
ENSXCOG00000001611	rnaseh2c	100	82.353	ENSAOCG00000016855	rnaseh2c	100	82.353	Amphiprion_ocellaris
ENSXCOG00000001611	rnaseh2c	100	83.088	ENSAPEG00000009850	rnaseh2c	100	83.088	Amphiprion_percula
ENSXCOG00000001611	rnaseh2c	100	79.412	ENSATEG00000014395	rnaseh2c	100	79.412	Anabas_testudineus
ENSXCOG00000001611	rnaseh2c	100	75.735	ENSACLG00000016950	rnaseh2c	100	75.735	Astatotilapia_calliptera
ENSXCOG00000001611	rnaseh2c	99	67.407	ENSAMXG00000001210	rnaseh2c	100	67.407	Astyanax_mexicanus
ENSXCOG00000001611	rnaseh2c	93	54.762	ENSCPBG00000023408	-	91	54.762	Chrysemys_picta_bellii
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSCSEG00000005808	rnaseh2c	99	76.471	Cynoglossus_semilaevis
ENSXCOG00000001611	rnaseh2c	100	91.176	ENSCVAG00000006337	rnaseh2c	100	91.176	Cyprinodon_variegatus
ENSXCOG00000001611	rnaseh2c	96	68.462	ENSDARG00000089637	rnaseh2c	95	68.462	Danio_rerio
ENSXCOG00000001611	rnaseh2c	79	52.778	ENSEBUG00000014939	rnaseh2c	69	52.778	Eptatretus_burgeri
ENSXCOG00000001611	rnaseh2c	97	69.466	ENSELUG00000007345	rnaseh2c	96	69.466	Esox_lucius
ENSXCOG00000001611	rnaseh2c	96	91.538	ENSFHEG00000002419	rnaseh2c	95	91.538	Fundulus_heteroclitus
ENSXCOG00000001611	rnaseh2c	65	70.787	ENSGMOG00000008727	rnaseh2c	99	70.787	Gadus_morhua
ENSXCOG00000001611	rnaseh2c	100	94.118	ENSGAFG00000016755	rnaseh2c	83	94.118	Gambusia_affinis
ENSXCOG00000001611	rnaseh2c	93	54.762	ENSGAGG00000008193	-	91	54.762	Gopherus_agassizii
ENSXCOG00000001611	rnaseh2c	100	77.206	ENSHBUG00000012806	rnaseh2c	100	77.206	Haplochromis_burtoni
ENSXCOG00000001611	rnaseh2c	100	72.059	ENSHCOG00000007177	rnaseh2c	100	72.059	Hippocampus_comes
ENSXCOG00000001611	rnaseh2c	96	66.154	ENSIPUG00000018044	rnaseh2c	96	66.154	Ictalurus_punctatus
ENSXCOG00000001611	rnaseh2c	100	78.676	ENSKMAG00000004184	rnaseh2c	100	78.676	Kryptolebias_marmoratus
ENSXCOG00000001611	rnaseh2c	100	77.372	ENSLBEG00000005742	rnaseh2c	100	77.372	Labrus_bergylta
ENSXCOG00000001611	rnaseh2c	96	57.364	ENSLACG00000010120	-	91	57.364	Latimeria_chalumnae
ENSXCOG00000001611	rnaseh2c	100	74.265	ENSMAMG00000021610	rnaseh2c	100	74.265	Mastacembelus_armatus
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSMZEG00005004796	rnaseh2c	100	76.471	Maylandia_zebra
ENSXCOG00000001611	rnaseh2c	100	78.676	ENSMMOG00000002869	rnaseh2c	97	83.065	Mola_mola
ENSXCOG00000001611	rnaseh2c	100	80.292	ENSMALG00000012198	rnaseh2c	100	80.292	Monopterus_albus
ENSXCOG00000001611	rnaseh2c	100	77.206	ENSNBRG00000001462	rnaseh2c	100	77.206	Neolamprologus_brichardi
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSONIG00000005338	rnaseh2c	99	76.471	Oreochromis_niloticus
ENSXCOG00000001611	rnaseh2c	100	74.265	ENSORLG00000023473	rnaseh2c	100	74.265	Oryzias_latipes
ENSXCOG00000001611	rnaseh2c	100	74.265	ENSORLG00020019053	rnaseh2c	91	74.265	Oryzias_latipes_hni
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSORLG00015017067	rnaseh2c	91	76.471	Oryzias_latipes_hsok
ENSXCOG00000001611	rnaseh2c	100	73.529	ENSOMEG00000018607	rnaseh2c	100	73.529	Oryzias_melastigma
ENSXCOG00000001611	rnaseh2c	100	57.353	ENSPKIG00000019331	rnaseh2c	100	57.353	Paramormyrops_kingsleyae
ENSXCOG00000001611	rnaseh2c	100	89.706	ENSPFOG00000009415	rnaseh2c	100	89.706	Poecilia_formosa
ENSXCOG00000001611	rnaseh2c	100	91.176	ENSPLAG00000023330	rnaseh2c	100	91.176	Poecilia_latipinna
ENSXCOG00000001611	rnaseh2c	100	89.706	ENSPMEG00000003696	rnaseh2c	100	89.706	Poecilia_mexicana
ENSXCOG00000001611	rnaseh2c	100	85.714	ENSPREG00000015384	rnaseh2c	73	85.714	Poecilia_reticulata
ENSXCOG00000001611	rnaseh2c	100	77.206	ENSPNYG00000014766	rnaseh2c	100	77.206	Pundamilia_nyererei
ENSXCOG00000001611	rnaseh2c	96	67.442	ENSPNAG00000019111	rnaseh2c	95	67.442	Pygocentrus_nattereri
ENSXCOG00000001611	rnaseh2c	96	66.667	ENSSFOG00015005760	rnaseh2c	94	66.667	Scleropages_formosus
ENSXCOG00000001611	rnaseh2c	100	77.206	ENSSMAG00000017738	rnaseh2c	100	77.206	Scophthalmus_maximus
ENSXCOG00000001611	rnaseh2c	100	79.412	ENSSDUG00000017285	rnaseh2c	100	79.412	Seriola_dumerili
ENSXCOG00000001611	rnaseh2c	100	80.882	ENSSLDG00000016030	rnaseh2c	100	80.882	Seriola_lalandi_dorsalis
ENSXCOG00000001611	rnaseh2c	96	50.376	ENSSPUG00000000842	-	88	50.746	Sphenodon_punctatus
ENSXCOG00000001611	rnaseh2c	100	79.412	ENSSPAG00000007536	rnaseh2c	100	79.412	Stegastes_partitus
ENSXCOG00000001611	rnaseh2c	97	73.282	ENSTRUG00000021845	rnaseh2c	96	73.282	Takifugu_rubripes
ENSXCOG00000001611	rnaseh2c	100	76.471	ENSTNIG00000000431	rnaseh2c	100	76.471	Tetraodon_nigroviridis
ENSXCOG00000001611	rnaseh2c	95	48.438	ENSXETG00000032466	-	93	48.438	Xenopus_tropicalis
ENSXCOG00000001611	rnaseh2c	100	96.324	ENSXMAG00000003147	rnaseh2c	83	96.324	Xiphophorus_maculatus