EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000001645 (Gene tree)
Gene ID
-
Gene Symbol
si:dkey-89b17.4
Alias
fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name
si:dkey-89b17.4
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
7391 bases
Position
chrKQ557208.1:24323129-24330519
Accession
ZDB-GENE-030131-8215
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78110
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78210
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78310
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78410
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78510
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78610
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78710
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78810
ENSXCOP00000002046zf-C2H2PF00096.263.8e-78910
ENSXCOP00000002046zf-C2H2PF00096.263.8e-781010
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5416
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5426
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5436
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5446
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5456
ENSXCOP00000002047zf-C2H2PF00096.266.3e-5466
ENSXCOP00000002047zf-metPF12874.79.4e-1012
ENSXCOP00000002047zf-metPF12874.79.4e-1022
ENSXCOP00000002046zf-metPF12874.71.3e-0712
ENSXCOP00000002046zf-metPF12874.71.3e-0722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000002077-3648-ENSXCOP000000020471215 (aa)--
ENSXCOT00000002076-4455-ENSXCOP000000020461484 (aa)--
Gene Model
Click here to download ENSXCOG00000001645's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001645's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000001645si:dkey-89b17.47231.496ENSXCOG00000006951-9531.250
ENSXCOG00000001645si:dkey-89b17.49741.509ENSXCOG00000019382-8141.509
ENSXCOG00000001645si:dkey-89b17.47650.633ENSXCOG00000003431-7940.260
ENSXCOG00000001645si:dkey-89b17.48730.657ENSXCOG00000007376-9539.370
ENSXCOG00000001645si:dkey-89b17.48630.749ENSXCOG00000016307-8943.966
ENSXCOG00000001645si:dkey-89b17.49833.793ENSXCOG00000001200-9435.200
ENSXCOG00000001645si:dkey-89b17.48931.392ENSXCOG00000007529-8954.762
ENSXCOG00000001645si:dkey-89b17.49930.479ENSXCOG00000007994-9030.357
ENSXCOG00000001645si:dkey-89b17.47731.356ENSXCOG00000009768-8631.356
ENSXCOG00000001645si:dkey-89b17.45940.000ENSXCOG00000003441-6939.474
ENSXCOG00000001645si:dkey-89b17.45943.210ENSXCOG00000002473-8743.210
ENSXCOG00000001645si:dkey-89b17.45731.839ENSXCOG00000012458-6331.839
ENSXCOG00000001645si:dkey-89b17.47334.010ENSXCOG00000008062-8648.333
ENSXCOG00000001645si:dkey-89b17.47334.848ENSXCOG00000007945-9738.261
ENSXCOG00000001645si:dkey-89b17.47134.112ENSXCOG00000007941-9933.645
ENSXCOG00000001645si:dkey-89b17.47432.735ENSXCOG00000002869-6435.185
ENSXCOG00000001645si:dkey-89b17.47439.683ENSXCOG00000019492-10037.168
ENSXCOG00000001645si:dkey-89b17.46837.662ENSXCOG00000003499-5741.593
ENSXCOG00000001645si:dkey-89b17.47344.262ENSXCOG00000007499zbtb416144.262
ENSXCOG00000001645si:dkey-89b17.47341.096ENSXCOG00000019484-8847.619
ENSXCOG00000001645si:dkey-89b17.47141.071ENSXCOG00000010567-9348.750
ENSXCOG00000001645si:dkey-89b17.49438.400ENSXCOG00000001116-9341.667
ENSXCOG00000001645si:dkey-89b17.45841.379ENSXCOG00000010488-6541.379
ENSXCOG00000001645si:dkey-89b17.46233.133ENSXCOG00000007413-6145.455
ENSXCOG00000001645si:dkey-89b17.48832.743ENSXCOG00000007414-9732.203
ENSXCOG00000001645si:dkey-89b17.47635.036ENSXCOG00000015947-9935.036
ENSXCOG00000001645si:dkey-89b17.49030.825ENSXCOG00000019443-9743.103
ENSXCOG00000001645si:dkey-89b17.48340.476ENSXCOG00000002857-9643.966
ENSXCOG00000001645si:dkey-89b17.45744.615ENSXCOG00000008056-7344.615
ENSXCOG00000001645si:dkey-89b17.45038.318ENSXCOG00000020768-9038.318
ENSXCOG00000001645si:dkey-89b17.47238.824ENSXCOG00000003896-6138.824
ENSXCOG00000001645si:dkey-89b17.47242.241ENSXCOG00000007937-8342.241
ENSXCOG00000001645si:dkey-89b17.45749.351ENSXCOG00000009781-6649.351
ENSXCOG00000001645si:dkey-89b17.47337.302ENSXCOG00000008083-8940.000
ENSXCOG00000001645si:dkey-89b17.47031.086ENSXCOG00000009665-7746.296
ENSXCOG00000001645si:dkey-89b17.49841.237ENSXCOG00000002714-9655.556
ENSXCOG00000001645si:dkey-89b17.45640.741ENSXCOG00000012924-9631.053
ENSXCOG00000001645si:dkey-89b17.46536.842ENSXCOG00000009772-9836.842
ENSXCOG00000001645si:dkey-89b17.48440.260ENSXCOG00000003472-9031.092
ENSXCOG00000001645si:dkey-89b17.48930.461ENSXCOG00000000354-7430.261
ENSXCOG00000001645si:dkey-89b17.47540.000ENSXCOG00000013504znf384l5240.000
ENSXCOG00000001645si:dkey-89b17.47330.854ENSXCOG00000000528-8744.545
ENSXCOG00000001645si:dkey-89b17.45243.529ENSXCOG00000010259-5540.367
ENSXCOG00000001645si:dkey-89b17.49133.333ENSXCOG00000016860-8743.373
ENSXCOG00000001645si:dkey-89b17.49338.710ENSXCOG00000007957-9634.677
ENSXCOG00000001645si:dkey-89b17.49037.692ENSXCOG00000018253-9837.405
ENSXCOG00000001645si:dkey-89b17.46430.769ENSXCOG00000003538-10033.036
ENSXCOG00000001645si:dkey-89b17.48534.646ENSXCOG00000003532-8034.646
ENSXCOG00000001645si:dkey-89b17.47138.281ENSXCOG00000003093-8938.281
ENSXCOG00000001645si:dkey-89b17.48237.037ENSXCOG00000013066-8741.538
ENSXCOG00000001645si:dkey-89b17.46334.161ENSXCOG00000014363-6341.071
ENSXCOG00000001645si:dkey-89b17.46930.698ENSXCOG00000014361-6935.526
ENSXCOG00000001645si:dkey-89b17.46435.200ENSXCOG00000011725-8335.200
ENSXCOG00000001645si:dkey-89b17.46832.727ENSXCOG00000003484-7132.727
ENSXCOG00000001645si:dkey-89b17.45842.241ENSXCOG00000010576-7642.241
ENSXCOG00000001645si:dkey-89b17.47338.889ENSXCOG00000007076-10036.290
ENSXCOG00000001645si:dkey-89b17.45342.857ENSXCOG00000003493-6242.857
ENSXCOG00000001645si:dkey-89b17.47342.529ENSXCOG00000007406-9136.585
ENSXCOG00000001645si:dkey-89b17.49932.394ENSXCOG00000007368-9936.458
ENSXCOG00000001645si:dkey-89b17.47139.726ENSXCOG00000019457-8640.625
ENSXCOG00000001645si:dkey-89b17.49936.782ENSXCOG00000016567-8236.800
ENSXCOG00000001645si:dkey-89b17.47231.387ENSXCOG00000007139-8431.387
ENSXCOG00000001645si:dkey-89b17.49948.611ENSXCOG00000009003-8548.611
ENSXCOG00000001645si:dkey-89b17.49043.860ENSXCOG00000015441-9530.159
ENSXCOG00000001645si:dkey-89b17.48935.652ENSXCOG00000012921-9635.714
ENSXCOG00000001645si:dkey-89b17.48441.935ENSXCOG00000001292-9245.882
ENSXCOG00000001645si:dkey-89b17.45730.603ENSXCOG00000008978-9930.603
ENSXCOG00000001645si:dkey-89b17.49035.345ENSXCOG00000013870-7435.345
ENSXCOG00000001645si:dkey-89b17.49330.961ENSXCOG00000007981-9941.593
ENSXCOG00000001645si:dkey-89b17.47331.967ENSXCOG00000007987-7631.707
ENSXCOG00000001645si:dkey-89b17.47431.250ENSXCOG00000008116-9630.366
ENSXCOG00000001645si:dkey-89b17.49139.506ENSXCOG00000003451-9339.506
ENSXCOG00000001645si:dkey-89b17.49831.204ENSXCOG00000001226-8831.695
ENSXCOG00000001645si:dkey-89b17.49936.220ENSXCOG00000019401-9737.113
ENSXCOG00000001645si:dkey-89b17.46932.645ENSXCOG00000007396-9338.272
ENSXCOG00000001645si:dkey-89b17.47834.071ENSXCOG00000007979-8443.548
ENSXCOG00000001645si:dkey-89b17.47333.086ENSXCOG00000006553-8943.103
ENSXCOG00000001645si:dkey-89b17.46131.776ENSXCOG00000019481-8431.280
ENSXCOG00000001645si:dkey-89b17.47837.500ENSXCOG00000019482-8837.500
ENSXCOG00000001645si:dkey-89b17.47440.678ENSXCOG00000002512-9140.678
ENSXCOG00000001645si:dkey-89b17.49041.509ENSXCOG00000017871zgc:1133436340.678
ENSXCOG00000001645si:dkey-89b17.48449.367ENSXCOG00000002898-8449.275
ENSXCOG00000001645si:dkey-89b17.48930.072ENSXCOG00000006614-9043.373
ENSXCOG00000001645si:dkey-89b17.47746.988ENSXCOG00000016117-9946.988
ENSXCOG00000001645si:dkey-89b17.49933.125ENSXCOG00000019149znf5266831.776
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000001645si:dkey-89b17.410042.589ENSAPOG00000020151znf6469352.381Acanthochromis_polyacanthus
ENSXCOG00000001645si:dkey-89b17.410090.837ENSAPOG00000018015si:dkey-89b17.410090.837Acanthochromis_polyacanthus
ENSXCOG00000001645si:dkey-89b17.410043.923ENSACIG00000023049znf6469756.000Amphilophus_citrinellus
ENSXCOG00000001645si:dkey-89b17.410091.510ENSACIG00000001025si:dkey-89b17.410091.572Amphilophus_citrinellus
ENSXCOG00000001645si:dkey-89b17.410090.837ENSAOCG00000018684si:dkey-89b17.410090.837Amphiprion_ocellaris
ENSXCOG00000001645si:dkey-89b17.410041.693ENSAOCG00000012062znf64610055.769Amphiprion_ocellaris
ENSXCOG00000001645si:dkey-89b17.410041.416ENSAPEG00000006427znf64610055.769Amphiprion_percula
ENSXCOG00000001645si:dkey-89b17.410091.082ENSAPEG00000007719si:dkey-89b17.410091.148Amphiprion_percula
ENSXCOG00000001645si:dkey-89b17.410090.415ENSATEG00000016814si:dkey-89b17.410090.655Anabas_testudineus
ENSXCOG00000001645si:dkey-89b17.410042.224ENSATEG00000015206znf64610042.053Anabas_testudineus
ENSXCOG00000001645si:dkey-89b17.410042.498ENSACLG00000012712znf6469848.000Astatotilapia_calliptera
ENSXCOG00000001645si:dkey-89b17.410089.633ENSACLG00000016017si:dkey-89b17.410089.633Astatotilapia_calliptera
ENSXCOG00000001645si:dkey-89b17.49968.342ENSAMXG00000001155si:dkey-89b17.49966.929Astyanax_mexicanus
ENSXCOG00000001645si:dkey-89b17.410041.924ENSAMXG00000035525znf64610059.649Astyanax_mexicanus
ENSXCOG00000001645si:dkey-89b17.49651.786ENSCSEG00000012389znf6469851.786Cynoglossus_semilaevis
ENSXCOG00000001645si:dkey-89b17.410085.138ENSCSEG00000010769si:dkey-89b17.410084.667Cynoglossus_semilaevis
ENSXCOG00000001645si:dkey-89b17.410093.269ENSCVAG00000012420si:dkey-89b17.410093.269Cyprinodon_variegatus
ENSXCOG00000001645si:dkey-89b17.410067.006ENSDARG00000075545si:dkey-89b17.410066.304Danio_rerio
ENSXCOG00000001645si:dkey-89b17.49748.214ENSDARG00000061424znf6469848.214Danio_rerio
ENSXCOG00000001645si:dkey-89b17.49971.821ENSELUG00000015516si:dkey-89b17.49871.518Esox_lucius
ENSXCOG00000001645si:dkey-89b17.410043.094ENSELUG00000010423znf6469848.148Esox_lucius
ENSXCOG00000001645si:dkey-89b17.49359.615ENSFHEG00000000561znf6469843.590Fundulus_heteroclitus
ENSXCOG00000001645si:dkey-89b17.410093.445ENSFHEG00000019457si:dkey-89b17.410093.445Fundulus_heteroclitus
ENSXCOG00000001645si:dkey-89b17.49960.377ENSGMOG00000016554znf6469960.377Gadus_morhua
ENSXCOG00000001645si:dkey-89b17.47255.556ENSGAFG00000016353-9355.556Gambusia_affinis
ENSXCOG00000001645si:dkey-89b17.410096.707ENSGAFG00000000345si:dkey-89b17.410096.707Gambusia_affinis
ENSXCOG00000001645si:dkey-89b17.49860.377ENSGACG00000008733znf6469460.377Gasterosteus_aculeatus
ENSXCOG00000001645si:dkey-89b17.49977.108ENSGACG00000014714si:dkey-89b17.49977.381Gasterosteus_aculeatus
ENSXCOG00000001645si:dkey-89b17.410042.785ENSHBUG00000004840znf6469848.000Haplochromis_burtoni
ENSXCOG00000001645si:dkey-89b17.410089.713ENSHBUG00000013093si:dkey-89b17.410089.713Haplochromis_burtoni
ENSXCOG00000001645si:dkey-89b17.410084.781ENSHCOG00000001901si:dkey-89b17.410084.303Hippocampus_comes
ENSXCOG00000001645si:dkey-89b17.49939.348ENSHCOG00000014890znf64610050.602Hippocampus_comes
ENSXCOG00000001645si:dkey-89b17.49942.919ENSIPUG00000018102znf64610062.500Ictalurus_punctatus
ENSXCOG00000001645si:dkey-89b17.45466.917ENSIPUG00000012830-8566.917Ictalurus_punctatus
ENSXCOG00000001645si:dkey-89b17.49967.731ENSIPUG00000012845si:dkey-89b17.49866.420Ictalurus_punctatus
ENSXCOG00000001645si:dkey-89b17.49841.139ENSKMAG00000011982znf6469057.895Kryptolebias_marmoratus
ENSXCOG00000001645si:dkey-89b17.410090.560ENSKMAG00000014037si:dkey-89b17.410091.200Kryptolebias_marmoratus
ENSXCOG00000001645si:dkey-89b17.410089.625ENSLBEG00000020291si:dkey-89b17.410089.625Labrus_bergylta
ENSXCOG00000001645si:dkey-89b17.49847.746ENSLBEG00000016562znf64610048.422Labrus_bergylta
ENSXCOG00000001645si:dkey-89b17.49646.774ENSLOCG00000003238si:dkey-89b17.49950.000Lepisosteus_oculatus
ENSXCOG00000001645si:dkey-89b17.410090.359ENSMAMG00000009604si:dkey-89b17.410090.359Mastacembelus_armatus
ENSXCOG00000001645si:dkey-89b17.410042.946ENSMAMG00000009313znf64610041.412Mastacembelus_armatus
ENSXCOG00000001645si:dkey-89b17.410089.633ENSMZEG00005003901si:dkey-89b17.410089.633Maylandia_zebra
ENSXCOG00000001645si:dkey-89b17.410042.714ENSMZEG00005011264znf6469848.000Maylandia_zebra
ENSXCOG00000001645si:dkey-89b17.410091.020ENSMMOG00000012741si:dkey-89b17.410090.939Mola_mola
ENSXCOG00000001645si:dkey-89b17.49950.000ENSMMOG00000002311znf6469855.556Mola_mola
ENSXCOG00000001645si:dkey-89b17.410089.849ENSMALG00000019558si:dkey-89b17.410089.876Monopterus_albus
ENSXCOG00000001645si:dkey-89b17.49739.655ENSMALG00000002274-9941.892Monopterus_albus
ENSXCOG00000001645si:dkey-89b17.410042.445ENSNBRG00000022534znf64610042.296Neolamprologus_brichardi
ENSXCOG00000001645si:dkey-89b17.410089.370ENSNBRG00000020314si:dkey-89b17.410089.436Neolamprologus_brichardi
ENSXCOG00000001645si:dkey-89b17.49841.860ENSONIG00000019947-10043.333Oreochromis_niloticus
ENSXCOG00000001645si:dkey-89b17.49871.563ENSONIG00000009324si:dkey-89b17.49972.134Oreochromis_niloticus
ENSXCOG00000001645si:dkey-89b17.410087.450ENSORLG00000024255si:dkey-89b17.410087.450Oryzias_latipes
ENSXCOG00000001645si:dkey-89b17.410040.436ENSORLG00000007885znf64610057.143Oryzias_latipes
ENSXCOG00000001645si:dkey-89b17.410040.165ENSORLG00020010285znf64610058.621Oryzias_latipes_hni
ENSXCOG00000001645si:dkey-89b17.410040.457ENSORLG00015008733znf64610058.621Oryzias_latipes_hsok
ENSXCOG00000001645si:dkey-89b17.410040.190ENSOMEG00000015658znf6469956.140Oryzias_melastigma
ENSXCOG00000001645si:dkey-89b17.410088.010ENSOMEG00000020587si:dkey-89b17.410088.010Oryzias_melastigma
ENSXCOG00000001645si:dkey-89b17.49853.333ENSPMGG00000004639znf6469951.282Periophthalmus_magnuspinnatus
ENSXCOG00000001645si:dkey-89b17.49870.724ENSPMGG00000015931-9771.473Periophthalmus_magnuspinnatus
ENSXCOG00000001645si:dkey-89b17.410098.122ENSPFOG00000008241si:dkey-89b17.410098.122Poecilia_formosa
ENSXCOG00000001645si:dkey-89b17.49838.538ENSPFOG00000004826-9941.558Poecilia_formosa
ENSXCOG00000001645si:dkey-89b17.49940.813ENSPLAG00000010454-9847.368Poecilia_latipinna
ENSXCOG00000001645si:dkey-89b17.410098.930ENSPLAG00000011382si:dkey-89b17.410098.930Poecilia_latipinna
ENSXCOG00000001645si:dkey-89b17.49739.703ENSPMEG00000018283znf6469747.368Poecilia_mexicana
ENSXCOG00000001645si:dkey-89b17.410098.765ENSPMEG00000000141si:dkey-89b17.410098.765Poecilia_mexicana
ENSXCOG00000001645si:dkey-89b17.49839.366ENSPREG00000017637znf6469841.040Poecilia_reticulata
ENSXCOG00000001645si:dkey-89b17.410096.472ENSPREG00000012579si:dkey-89b17.410096.472Poecilia_reticulata
ENSXCOG00000001645si:dkey-89b17.410089.713ENSPNYG00000011901si:dkey-89b17.410089.713Pundamilia_nyererei
ENSXCOG00000001645si:dkey-89b17.410042.714ENSPNYG00000017692znf6469848.000Pundamilia_nyererei
ENSXCOG00000001645si:dkey-89b17.49868.548ENSPNAG00000022072si:dkey-89b17.49867.368Pygocentrus_nattereri
ENSXCOG00000001645si:dkey-89b17.410042.831ENSPNAG00000000750znf64610042.230Pygocentrus_nattereri
ENSXCOG00000001645si:dkey-89b17.49938.123ENSSFOG00015004737si:dkey-89b17.49942.715Scleropages_formosus
ENSXCOG00000001645si:dkey-89b17.410043.071ENSSMAG00000012378znf6469548.384Scophthalmus_maximus
ENSXCOG00000001645si:dkey-89b17.410090.757ENSSDUG00000015931si:dkey-89b17.410090.757Seriola_dumerili
ENSXCOG00000001645si:dkey-89b17.410043.176ENSSDUG00000002675znf64610053.571Seriola_dumerili
ENSXCOG00000001645si:dkey-89b17.410090.837ENSSLDG00000012415si:dkey-89b17.410090.837Seriola_lalandi_dorsalis
ENSXCOG00000001645si:dkey-89b17.410043.141ENSSLDG00000018521znf64610053.571Seriola_lalandi_dorsalis
ENSXCOG00000001645si:dkey-89b17.410090.844ENSSPAG00000018810si:dkey-89b17.410090.844Stegastes_partitus
ENSXCOG00000001645si:dkey-89b17.410043.260ENSSPAG00000016701znf64610041.500Stegastes_partitus
ENSXCOG00000001645si:dkey-89b17.49852.239ENSTRUG00000025597znf6469851.786Takifugu_rubripes
ENSXCOG00000001645si:dkey-89b17.410088.105ENSTRUG00000020495si:dkey-89b17.410087.970Takifugu_rubripes
ENSXCOG00000001645si:dkey-89b17.49954.600ENSTNIG00000001159si:dkey-89b17.410053.448Tetraodon_nigroviridis
ENSXCOG00000001645si:dkey-89b17.49944.915ENSTNIG00000000073znf6469951.667Tetraodon_nigroviridis
ENSXCOG00000001645si:dkey-89b17.410099.461ENSXMAG00000024528si:dkey-89b17.410099.461Xiphophorus_maculatus
ENSXCOG00000001645si:dkey-89b17.49840.966ENSXMAG00000018743-9655.556Xiphophorus_maculatus

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