EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001764 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 8188 bases
Position: chrKQ557207.1:6909190-6917377
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000002213	Beta-Casp	PF10996.8	2.6e-21	1	1
ENSXCOP00000002213	Lactamase_B	PF00753.27	3.2e-05	1	1
ENSXCOP00000002213	RMMBL	PF07521.12	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000002244	-	2361	-	ENSXCOP00000002213	786 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001764	cpsf2	100	85.678	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSXCOG00000001764	cpsf2	100	94.917	ENSAPOG00000001242	cpsf2	100	94.917	Acanthochromis_polyacanthus
ENSXCOG00000001764	cpsf2	100	94.797	ENSACIG00000009331	cpsf2	100	94.797	Amphilophus_citrinellus
ENSXCOG00000001764	cpsf2	100	95.680	ENSAOCG00000014095	cpsf2	100	95.680	Amphiprion_ocellaris
ENSXCOG00000001764	cpsf2	100	95.680	ENSAPEG00000009158	cpsf2	100	95.680	Amphiprion_percula
ENSXCOG00000001764	cpsf2	97	93.490	ENSATEG00000017644	cpsf2	99	93.289	Anabas_testudineus
ENSXCOG00000001764	cpsf2	100	85.443	ENSAPLG00000006330	CPSF2	100	85.443	Anas_platyrhynchos
ENSXCOG00000001764	cpsf2	100	85.044	ENSACAG00000009245	CPSF2	100	85.044	Anolis_carolinensis
ENSXCOG00000001764	cpsf2	100	85.932	ENSANAG00000022915	CPSF2	100	85.932	Aotus_nancymaae
ENSXCOG00000001764	cpsf2	100	89.480	ENSAMXG00000018696	cpsf2	100	89.480	Astyanax_mexicanus
ENSXCOG00000001764	cpsf2	100	85.805	ENSBTAG00000010227	CPSF2	100	85.805	Bos_taurus
ENSXCOG00000001764	cpsf2	100	42.407	WBGene00017313	cpsf-2	100	42.173	Caenorhabditis_elegans
ENSXCOG00000001764	cpsf2	100	85.932	ENSCJAG00000018069	CPSF2	100	85.932	Callithrix_jacchus
ENSXCOG00000001764	cpsf2	100	85.678	ENSCAFG00000010909	CPSF2	100	85.678	Canis_familiaris
ENSXCOG00000001764	cpsf2	100	85.678	ENSCAFG00020020670	CPSF2	100	85.678	Canis_lupus_dingo
ENSXCOG00000001764	cpsf2	100	85.805	ENSCHIG00000023848	CPSF2	100	85.805	Capra_hircus
ENSXCOG00000001764	cpsf2	100	85.932	ENSTSYG00000009036	CPSF2	100	85.932	Carlito_syrichta
ENSXCOG00000001764	cpsf2	100	85.805	ENSCPOG00000010899	CPSF2	100	85.805	Cavia_porcellus
ENSXCOG00000001764	cpsf2	100	85.932	ENSCCAG00000028088	CPSF2	100	85.932	Cebus_capucinus
ENSXCOG00000001764	cpsf2	100	85.805	ENSCATG00000030132	CPSF2	100	85.805	Cercocebus_atys
ENSXCOG00000001764	cpsf2	100	85.932	ENSCLAG00000012404	CPSF2	100	85.932	Chinchilla_lanigera
ENSXCOG00000001764	cpsf2	100	85.805	ENSCSAG00000011300	CPSF2	100	85.805	Chlorocebus_sabaeus
ENSXCOG00000001764	cpsf2	100	80.228	ENSCHOG00000012904	CPSF2	100	80.228	Choloepus_hoffmanni
ENSXCOG00000001764	cpsf2	100	85.551	ENSCPBG00000008766	CPSF2	97	85.551	Chrysemys_picta_bellii
ENSXCOG00000001764	cpsf2	100	52.861	ENSCING00000007881	-	100	52.664	Ciona_intestinalis
ENSXCOG00000001764	cpsf2	94	85.811	ENSCANG00000041651	CPSF2	100	85.792	Colobus_angolensis_palliatus
ENSXCOG00000001764	cpsf2	100	85.171	ENSCGRG00001006901	Cpsf2	100	85.171	Cricetulus_griseus_chok1gshd
ENSXCOG00000001764	cpsf2	100	85.171	ENSCGRG00000012416	Cpsf2	100	85.171	Cricetulus_griseus_crigri
ENSXCOG00000001764	cpsf2	100	93.020	ENSCSEG00000004116	cpsf2	100	93.020	Cynoglossus_semilaevis
ENSXCOG00000001764	cpsf2	100	97.840	ENSCVAG00000000095	cpsf2	100	97.840	Cyprinodon_variegatus
ENSXCOG00000001764	cpsf2	100	87.975	ENSDARG00000028971	cpsf2	100	87.975	Danio_rerio
ENSXCOG00000001764	cpsf2	100	85.805	ENSDNOG00000042757	CPSF2	100	85.805	Dasypus_novemcinctus
ENSXCOG00000001764	cpsf2	100	85.805	ENSDORG00000013709	Cpsf2	100	85.805	Dipodomys_ordii
ENSXCOG00000001764	cpsf2	100	53.770	FBgn0027873	Cpsf100	100	53.656	Drosophila_melanogaster
ENSXCOG00000001764	cpsf2	100	77.975	ENSETEG00000012123	CPSF2	100	77.975	Echinops_telfairi
ENSXCOG00000001764	cpsf2	52	75.795	ENSEBUG00000012098	cpsf2	93	75.795	Eptatretus_burgeri
ENSXCOG00000001764	cpsf2	89	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSXCOG00000001764	cpsf2	100	85.678	ENSECAG00000023935	CPSF2	100	85.678	Equus_caballus
ENSXCOG00000001764	cpsf2	100	88.693	ENSELUG00000008442	cpsf2	100	88.693	Esox_lucius
ENSXCOG00000001764	cpsf2	100	85.678	ENSFCAG00000007886	CPSF2	100	85.678	Felis_catus
ENSXCOG00000001764	cpsf2	100	85.533	ENSFALG00000002412	CPSF2	100	85.533	Ficedula_albicollis
ENSXCOG00000001764	cpsf2	100	85.678	ENSFDAG00000006327	CPSF2	100	85.678	Fukomys_damarensis
ENSXCOG00000001764	cpsf2	96	95.419	ENSFHEG00000015465	cpsf2	98	96.330	Fundulus_heteroclitus
ENSXCOG00000001764	cpsf2	100	89.899	ENSGMOG00000008761	cpsf2	100	89.899	Gadus_morhua
ENSXCOG00000001764	cpsf2	100	85.787	ENSGALG00000010783	CPSF2	100	85.787	Gallus_gallus
ENSXCOG00000001764	cpsf2	100	98.856	ENSGAFG00000001407	cpsf2	100	98.856	Gambusia_affinis
ENSXCOG00000001764	cpsf2	100	94.028	ENSGACG00000008418	cpsf2	100	94.028	Gasterosteus_aculeatus
ENSXCOG00000001764	cpsf2	100	85.425	ENSGAGG00000008287	CPSF2	100	85.425	Gopherus_agassizii
ENSXCOG00000001764	cpsf2	100	85.678	ENSGGOG00000011799	CPSF2	100	85.678	Gorilla_gorilla
ENSXCOG00000001764	cpsf2	100	93.139	ENSHBUG00000023466	cpsf2	100	93.139	Haplochromis_burtoni
ENSXCOG00000001764	cpsf2	100	85.805	ENSHGLG00000018311	CPSF2	100	85.805	Heterocephalus_glaber_female
ENSXCOG00000001764	cpsf2	100	85.805	ENSHGLG00100016460	CPSF2	100	85.805	Heterocephalus_glaber_male
ENSXCOG00000001764	cpsf2	100	93.011	ENSHCOG00000019527	cpsf2	98	93.011	Hippocampus_comes
ENSXCOG00000001764	cpsf2	100	89.480	ENSIPUG00000020857	cpsf2	100	89.480	Ictalurus_punctatus
ENSXCOG00000001764	cpsf2	100	85.932	ENSSTOG00000009528	CPSF2	100	85.932	Ictidomys_tridecemlineatus
ENSXCOG00000001764	cpsf2	100	85.551	ENSJJAG00000017925	Cpsf2	100	85.551	Jaculus_jaculus
ENSXCOG00000001764	cpsf2	100	94.663	ENSKMAG00000019429	cpsf2	100	94.663	Kryptolebias_marmoratus
ENSXCOG00000001764	cpsf2	95	93.029	ENSLBEG00000011585	cpsf2	100	93.029	Labrus_bergylta
ENSXCOG00000001764	cpsf2	100	83.376	ENSLACG00000019024	CPSF2	100	83.650	Latimeria_chalumnae
ENSXCOG00000001764	cpsf2	100	88.481	ENSLOCG00000014102	cpsf2	100	88.481	Lepisosteus_oculatus
ENSXCOG00000001764	cpsf2	100	85.209	ENSLAFG00000004891	CPSF2	100	85.209	Loxodonta_africana
ENSXCOG00000001764	cpsf2	100	85.805	ENSMFAG00000041212	CPSF2	100	85.805	Macaca_fascicularis
ENSXCOG00000001764	cpsf2	100	85.805	ENSMMUG00000000699	CPSF2	100	85.805	Macaca_mulatta
ENSXCOG00000001764	cpsf2	100	85.805	ENSMNEG00000031584	CPSF2	100	85.805	Macaca_nemestrina
ENSXCOG00000001764	cpsf2	100	85.805	ENSMLEG00000029394	CPSF2	100	85.805	Mandrillus_leucophaeus
ENSXCOG00000001764	cpsf2	100	95.172	ENSMAMG00000004235	cpsf2	100	95.172	Mastacembelus_armatus
ENSXCOG00000001764	cpsf2	100	93.266	ENSMZEG00005001769	cpsf2	100	93.266	Maylandia_zebra
ENSXCOG00000001764	cpsf2	100	85.551	ENSMGAG00000013122	CPSF2	100	85.551	Meleagris_gallopavo
ENSXCOG00000001764	cpsf2	100	85.171	ENSMAUG00000015160	Cpsf2	100	85.171	Mesocricetus_auratus
ENSXCOG00000001764	cpsf2	100	85.805	ENSMICG00000016441	CPSF2	100	85.805	Microcebus_murinus
ENSXCOG00000001764	cpsf2	100	85.171	ENSMOCG00000015372	Cpsf2	100	85.171	Microtus_ochrogaster
ENSXCOG00000001764	cpsf2	100	88.804	ENSMMOG00000015590	cpsf2	100	88.804	Mola_mola
ENSXCOG00000001764	cpsf2	100	85.805	ENSMODG00000002042	CPSF2	100	85.805	Monodelphis_domestica
ENSXCOG00000001764	cpsf2	100	91.360	ENSMALG00000022275	cpsf2	100	91.360	Monopterus_albus
ENSXCOG00000001764	cpsf2	100	85.425	ENSMUSG00000041781	Cpsf2	100	85.425	Mus_musculus
ENSXCOG00000001764	cpsf2	100	85.298	MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	Mus_pahari
ENSXCOG00000001764	cpsf2	100	85.425	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.425	Mus_spretus
ENSXCOG00000001764	cpsf2	100	85.805	ENSMPUG00000007617	CPSF2	98	85.805	Mustela_putorius_furo
ENSXCOG00000001764	cpsf2	100	85.298	ENSMLUG00000005570	CPSF2	100	85.298	Myotis_lucifugus
ENSXCOG00000001764	cpsf2	100	85.551	ENSNGAG00000020312	Cpsf2	100	85.551	Nannospalax_galili
ENSXCOG00000001764	cpsf2	100	93.647	ENSNBRG00000022402	cpsf2	100	93.647	Neolamprologus_brichardi
ENSXCOG00000001764	cpsf2	100	85.298	ENSNLEG00000017132	CPSF2	100	85.298	Nomascus_leucogenys
ENSXCOG00000001764	cpsf2	91	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSXCOG00000001764	cpsf2	94	81.682	ENSOPRG00000008484	-	100	81.682	Ochotona_princeps
ENSXCOG00000001764	cpsf2	100	85.551	ENSODEG00000008682	CPSF2	100	85.551	Octodon_degus
ENSXCOG00000001764	cpsf2	100	93.647	ENSONIG00000005901	cpsf2	100	93.647	Oreochromis_niloticus
ENSXCOG00000001764	cpsf2	100	85.425	ENSOANG00000003822	CPSF2	100	85.425	Ornithorhynchus_anatinus
ENSXCOG00000001764	cpsf2	100	85.551	ENSOCUG00000005713	CPSF2	100	85.551	Oryctolagus_cuniculus
ENSXCOG00000001764	cpsf2	100	88.310	ENSORLG00000011628	cpsf2	100	88.310	Oryzias_latipes
ENSXCOG00000001764	cpsf2	100	94.155	ENSORLG00020016980	cpsf2	100	94.155	Oryzias_latipes_hni
ENSXCOG00000001764	cpsf2	100	94.155	ENSORLG00015011910	cpsf2	100	94.155	Oryzias_latipes_hsok
ENSXCOG00000001764	cpsf2	100	94.416	ENSOMEG00000022876	cpsf2	100	94.416	Oryzias_melastigma
ENSXCOG00000001764	cpsf2	100	82.807	ENSOARG00000012889	CPSF2	100	82.807	Ovis_aries
ENSXCOG00000001764	cpsf2	100	85.678	ENSPPAG00000039666	CPSF2	100	85.678	Pan_paniscus
ENSXCOG00000001764	cpsf2	99	85.660	ENSPPRG00000010869	CPSF2	100	85.660	Panthera_pardus
ENSXCOG00000001764	cpsf2	100	85.678	ENSPTIG00000021202	CPSF2	100	85.678	Panthera_tigris_altaica
ENSXCOG00000001764	cpsf2	100	85.678	ENSPTRG00000006651	CPSF2	100	85.678	Pan_troglodytes
ENSXCOG00000001764	cpsf2	100	85.805	ENSPANG00000017417	CPSF2	100	85.805	Papio_anubis
ENSXCOG00000001764	cpsf2	100	84.791	ENSPKIG00000021453	cpsf2	100	84.791	Paramormyrops_kingsleyae
ENSXCOG00000001764	cpsf2	100	84.918	ENSPSIG00000006289	CPSF2	100	84.918	Pelodiscus_sinensis
ENSXCOG00000001764	cpsf2	76	86.689	ENSPMGG00000002511	cpsf2	99	87.500	Periophthalmus_magnuspinnatus
ENSXCOG00000001764	cpsf2	100	85.551	ENSPEMG00000007917	Cpsf2	100	85.551	Peromyscus_maniculatus_bairdii
ENSXCOG00000001764	cpsf2	100	72.522	ENSPMAG00000006205	cpsf2	100	72.784	Petromyzon_marinus
ENSXCOG00000001764	cpsf2	100	85.805	ENSPCIG00000011393	CPSF2	100	85.805	Phascolarctos_cinereus
ENSXCOG00000001764	cpsf2	100	98.602	ENSPFOG00000018648	cpsf2	100	98.602	Poecilia_formosa
ENSXCOG00000001764	cpsf2	100	98.602	ENSPLAG00000019199	cpsf2	99	98.602	Poecilia_latipinna
ENSXCOG00000001764	cpsf2	96	98.679	ENSPMEG00000012100	cpsf2	100	98.525	Poecilia_mexicana
ENSXCOG00000001764	cpsf2	100	98.094	ENSPREG00000008960	cpsf2	100	98.094	Poecilia_reticulata
ENSXCOG00000001764	cpsf2	64	81.909	ENSPPYG00000029685	-	100	81.909	Pongo_abelii
ENSXCOG00000001764	cpsf2	100	85.298	ENSPCAG00000012477	CPSF2	100	85.298	Procavia_capensis
ENSXCOG00000001764	cpsf2	100	85.932	ENSPCOG00000026387	CPSF2	100	85.932	Propithecus_coquereli
ENSXCOG00000001764	cpsf2	64	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSXCOG00000001764	cpsf2	100	93.401	ENSPNYG00000023356	cpsf2	100	93.401	Pundamilia_nyererei
ENSXCOG00000001764	cpsf2	100	90.368	ENSPNAG00000001849	cpsf2	100	90.368	Pygocentrus_nattereri
ENSXCOG00000001764	cpsf2	100	85.551	ENSRNOG00000005733	Cpsf2	100	85.551	Rattus_norvegicus
ENSXCOG00000001764	cpsf2	100	85.805	ENSRBIG00000044792	CPSF2	100	85.805	Rhinopithecus_bieti
ENSXCOG00000001764	cpsf2	100	85.805	ENSRROG00000034875	CPSF2	100	85.805	Rhinopithecus_roxellana
ENSXCOG00000001764	cpsf2	100	85.932	ENSSBOG00000024571	CPSF2	100	85.932	Saimiri_boliviensis_boliviensis
ENSXCOG00000001764	cpsf2	100	85.932	ENSSHAG00000010458	CPSF2	100	85.932	Sarcophilus_harrisii
ENSXCOG00000001764	cpsf2	100	90.368	ENSSFOG00015002117	cpsf2	100	90.494	Scleropages_formosus
ENSXCOG00000001764	cpsf2	100	92.893	ENSSMAG00000002001	cpsf2	100	93.782	Scophthalmus_maximus
ENSXCOG00000001764	cpsf2	100	95.299	ENSSDUG00000004084	cpsf2	100	95.299	Seriola_dumerili
ENSXCOG00000001764	cpsf2	100	94.917	ENSSLDG00000024330	cpsf2	100	94.917	Seriola_lalandi_dorsalis
ENSXCOG00000001764	cpsf2	58	95.349	ENSSARG00000009784	-	63	95.349	Sorex_araneus
ENSXCOG00000001764	cpsf2	100	85.425	ENSSPUG00000013485	CPSF2	100	85.425	Sphenodon_punctatus
ENSXCOG00000001764	cpsf2	100	94.790	ENSSPAG00000013284	cpsf2	100	94.790	Stegastes_partitus
ENSXCOG00000001764	cpsf2	100	85.551	ENSSSCG00000002447	CPSF2	100	85.551	Sus_scrofa
ENSXCOG00000001764	cpsf2	100	85.660	ENSTGUG00000012571	-	100	85.660	Taeniopygia_guttata
ENSXCOG00000001764	cpsf2	100	92.630	ENSTRUG00000003742	cpsf2	100	92.630	Takifugu_rubripes
ENSXCOG00000001764	cpsf2	100	91.381	ENSTNIG00000012228	cpsf2	100	92.395	Tetraodon_nigroviridis
ENSXCOG00000001764	cpsf2	91	83.623	ENSTBEG00000004530	CPSF2	94	83.623	Tupaia_belangeri
ENSXCOG00000001764	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSXCOG00000001764	cpsf2	100	85.805	ENSUAMG00000028071	CPSF2	100	85.805	Ursus_americanus
ENSXCOG00000001764	cpsf2	100	85.805	ENSUMAG00000005029	CPSF2	99	90.097	Ursus_maritimus
ENSXCOG00000001764	cpsf2	99	85.660	ENSVPAG00000003503	CPSF2	100	85.660	Vicugna_pacos
ENSXCOG00000001764	cpsf2	100	85.678	ENSVVUG00000024642	CPSF2	100	85.678	Vulpes_vulpes
ENSXCOG00000001764	cpsf2	100	84.157	ENSXETG00000010289	cpsf2	100	84.157	Xenopus_tropicalis
ENSXCOG00000001764	cpsf2	100	99.365	ENSXMAG00000017048	cpsf2	100	99.365	Xiphophorus_maculatus