EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000001875 (Gene tree)
Gene ID: -
Gene Symbol: tdrd3
Alias: zgc:77174
Full Name: tudor domain containing 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 13788 bases
Position: chrKQ557219.1:12076122-12089909
Accession: ZDB-GENE-040426-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000002380	TUDOR	PF00567.24	2.7e-07	1	1
ENSXCOP00000002380	SMN	PF06003.12	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000002408	-	2235	-	ENSXCOP00000002374	744 (aa)	-	-
ENSXCOT00000002414	-	2397	-	ENSXCOP00000002380	798 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001875	tdrd3	97	48.939	ENSG00000083544	TDRD3	100	71.318	Homo_sapiens
ENSXCOG00000001875	tdrd3	97	79.484	ENSAPOG00000016078	tdrd3	98	79.484	Acanthochromis_polyacanthus
ENSXCOG00000001875	tdrd3	97	48.383	ENSAMEG00000000082	TDRD3	99	47.880	Ailuropoda_melanoleuca
ENSXCOG00000001875	tdrd3	97	78.065	ENSACIG00000023900	tdrd3	98	78.065	Amphilophus_citrinellus
ENSXCOG00000001875	tdrd3	97	80.516	ENSAOCG00000001410	tdrd3	98	80.516	Amphiprion_ocellaris
ENSXCOG00000001875	tdrd3	97	77.032	ENSAPEG00000022810	tdrd3	98	77.032	Amphiprion_percula
ENSXCOG00000001875	tdrd3	97	76.577	ENSATEG00000014570	tdrd3	98	76.577	Anabas_testudineus
ENSXCOG00000001875	tdrd3	91	48.118	ENSAPLG00000014316	TDRD3	100	47.844	Anas_platyrhynchos
ENSXCOG00000001875	tdrd3	97	47.215	ENSACAG00000004923	TDRD3	78	60.557	Anolis_carolinensis
ENSXCOG00000001875	tdrd3	51	55.944	ENSANAG00000027927	-	70	55.944	Aotus_nancymaae
ENSXCOG00000001875	tdrd3	98	49.132	ENSANAG00000030827	-	99	48.881	Aotus_nancymaae
ENSXCOG00000001875	tdrd3	97	77.191	ENSACLG00000022962	tdrd3	98	77.577	Astatotilapia_calliptera
ENSXCOG00000001875	tdrd3	97	57.286	ENSAMXG00000006847	tdrd3	98	56.873	Astyanax_mexicanus
ENSXCOG00000001875	tdrd3	97	49.375	ENSBTAG00000009308	TDRD3	100	47.149	Bos_taurus
ENSXCOG00000001875	tdrd3	97	49.057	ENSCJAG00000003853	TDRD3	98	48.802	Callithrix_jacchus
ENSXCOG00000001875	tdrd3	97	48.731	ENSCAFG00000023746	-	98	48.473	Canis_familiaris
ENSXCOG00000001875	tdrd3	98	48.492	ENSCAFG00020018076	-	100	48.237	Canis_lupus_dingo
ENSXCOG00000001875	tdrd3	67	38.462	ENSCAFG00020015271	-	95	37.818	Canis_lupus_dingo
ENSXCOG00000001875	tdrd3	97	49.121	ENSCHIG00000020019	TDRD3	99	48.293	Capra_hircus
ENSXCOG00000001875	tdrd3	96	47.793	ENSTSYG00000002254	TDRD3	100	47.348	Carlito_syrichta
ENSXCOG00000001875	tdrd3	98	39.653	ENSCAPG00000012313	TDRD3	100	39.379	Cavia_aperea
ENSXCOG00000001875	tdrd3	97	44.151	ENSCPOG00000010437	TDRD3	98	43.632	Cavia_porcellus
ENSXCOG00000001875	tdrd3	98	48.712	ENSCCAG00000023831	TDRD3	99	48.642	Cebus_capucinus
ENSXCOG00000001875	tdrd3	97	49.312	ENSCATG00000029498	TDRD3	99	49.002	Cercocebus_atys
ENSXCOG00000001875	tdrd3	97	48.744	ENSCLAG00000002654	TDRD3	100	48.172	Chinchilla_lanigera
ENSXCOG00000001875	tdrd3	97	49.186	ENSCSAG00000017640	TDRD3	98	48.934	Chlorocebus_sabaeus
ENSXCOG00000001875	tdrd3	53	64.214	ENSCHOG00000012825	TDRD3	67	64.214	Choloepus_hoffmanni
ENSXCOG00000001875	tdrd3	97	48.481	ENSCPBG00000026646	TDRD3	97	48.350	Chrysemys_picta_bellii
ENSXCOG00000001875	tdrd3	97	48.756	ENSCANG00000034303	TDRD3	99	48.504	Colobus_angolensis_palliatus
ENSXCOG00000001875	tdrd3	97	49.252	ENSCGRG00001011297	Tdrd3	99	48.875	Cricetulus_griseus_chok1gshd
ENSXCOG00000001875	tdrd3	97	49.252	ENSCGRG00000015535	-	100	47.018	Cricetulus_griseus_crigri
ENSXCOG00000001875	tdrd3	97	71.263	ENSCSEG00000000670	tdrd3	98	70.361	Cynoglossus_semilaevis
ENSXCOG00000001875	tdrd3	93	87.248	ENSCVAG00000015641	tdrd3	98	87.248	Cyprinodon_variegatus
ENSXCOG00000001875	tdrd3	97	58.665	ENSDARG00000025421	tdrd3	99	57.707	Danio_rerio
ENSXCOG00000001875	tdrd3	98	48.564	ENSDNOG00000002011	TDRD3	99	48.310	Dasypus_novemcinctus
ENSXCOG00000001875	tdrd3	97	47.655	ENSDORG00000008714	Tdrd3	98	47.014	Dipodomys_ordii
ENSXCOG00000001875	tdrd3	63	42.984	ENSEBUG00000011812	tdrd3	79	42.857	Eptatretus_burgeri
ENSXCOG00000001875	tdrd3	97	49.250	ENSEASG00005015575	TDRD3	98	48.747	Equus_asinus_asinus
ENSXCOG00000001875	tdrd3	97	49.250	ENSECAG00000000550	TDRD3	99	48.128	Equus_caballus
ENSXCOG00000001875	tdrd3	66	52.439	ENSEEUG00000002192	TDRD3	79	51.235	Erinaceus_europaeus
ENSXCOG00000001875	tdrd3	97	50.382	ENSELUG00000000994	tdrd3	97	50.490	Esox_lucius
ENSXCOG00000001875	tdrd3	97	48.310	ENSFCAG00000022126	TDRD3	98	48.232	Felis_catus
ENSXCOG00000001875	tdrd3	98	48.371	ENSFALG00000007927	TDRD3	99	47.102	Ficedula_albicollis
ENSXCOG00000001875	tdrd3	97	48.428	ENSFDAG00000011552	TDRD3	100	47.793	Fukomys_damarensis
ENSXCOG00000001875	tdrd3	97	88.486	ENSFHEG00000009513	tdrd3	98	88.486	Fundulus_heteroclitus
ENSXCOG00000001875	tdrd3	78	63.124	ENSGMOG00000005733	tdrd3	96	63.341	Gadus_morhua
ENSXCOG00000001875	tdrd3	97	48.101	ENSGALG00000016936	TDRD3	98	47.643	Gallus_gallus
ENSXCOG00000001875	tdrd3	97	95.860	ENSGAFG00000012013	tdrd3	98	95.860	Gambusia_affinis
ENSXCOG00000001875	tdrd3	97	71.374	ENSGACG00000015264	tdrd3	98	71.374	Gasterosteus_aculeatus
ENSXCOG00000001875	tdrd3	97	48.289	ENSGAGG00000003173	TDRD3	98	48.030	Gopherus_agassizii
ENSXCOG00000001875	tdrd3	97	48.814	ENSGGOG00000025560	TDRD3	100	48.561	Gorilla_gorilla
ENSXCOG00000001875	tdrd3	97	77.191	ENSHBUG00000007081	tdrd3	98	77.577	Haplochromis_burtoni
ENSXCOG00000001875	tdrd3	97	42.351	ENSHGLG00000009668	-	99	41.858	Heterocephalus_glaber_female
ENSXCOG00000001875	tdrd3	97	48.928	ENSHGLG00000018707	-	98	48.420	Heterocephalus_glaber_female
ENSXCOG00000001875	tdrd3	87	42.222	ENSHGLG00000014119	-	100	41.713	Heterocephalus_glaber_female
ENSXCOG00000001875	tdrd3	91	41.567	ENSHGLG00000010652	-	97	41.434	Heterocephalus_glaber_female
ENSXCOG00000001875	tdrd3	97	48.802	ENSHGLG00100010966	-	100	48.293	Heterocephalus_glaber_male
ENSXCOG00000001875	tdrd3	78	71.329	ENSHGLG00100017738	-	94	71.329	Heterocephalus_glaber_male
ENSXCOG00000001875	tdrd3	97	65.375	ENSHCOG00000002157	tdrd3	98	65.375	Hippocampus_comes
ENSXCOG00000001875	tdrd3	97	56.855	ENSIPUG00000012320	tdrd3	98	56.855	Ictalurus_punctatus
ENSXCOG00000001875	tdrd3	97	50.318	ENSSTOG00000028945	-	100	49.808	Ictidomys_tridecemlineatus
ENSXCOG00000001875	tdrd3	94	47.409	ENSJJAG00000023665	Tdrd3	97	47.786	Jaculus_jaculus
ENSXCOG00000001875	tdrd3	97	81.008	ENSKMAG00000021849	tdrd3	98	81.008	Kryptolebias_marmoratus
ENSXCOG00000001875	tdrd3	92	77.131	ENSLBEG00000011777	tdrd3	98	77.131	Labrus_bergylta
ENSXCOG00000001875	tdrd3	97	48.546	ENSLACG00000001412	TDRD3	99	48.865	Latimeria_chalumnae
ENSXCOG00000001875	tdrd3	97	55.019	ENSLOCG00000004652	tdrd3	98	55.058	Lepisosteus_oculatus
ENSXCOG00000001875	tdrd3	69	39.825	ENSLAFG00000002705	TDRD3	99	39.719	Loxodonta_africana
ENSXCOG00000001875	tdrd3	97	49.437	ENSMFAG00000007606	TDRD3	99	49.127	Macaca_fascicularis
ENSXCOG00000001875	tdrd3	99	48.596	ENSMMUG00000007169	TDRD3	99	48.348	Macaca_mulatta
ENSXCOG00000001875	tdrd3	97	49.562	ENSMNEG00000002038	TDRD3	99	49.252	Macaca_nemestrina
ENSXCOG00000001875	tdrd3	55	37.662	ENSMLEG00000039737	TDRD3	98	36.444	Mandrillus_leucophaeus
ENSXCOG00000001875	tdrd3	97	74.807	ENSMAMG00000003998	tdrd3	98	74.807	Mastacembelus_armatus
ENSXCOG00000001875	tdrd3	97	77.191	ENSMZEG00005004551	tdrd3	98	77.577	Maylandia_zebra
ENSXCOG00000001875	tdrd3	97	48.000	ENSMGAG00000014961	TDRD3	99	47.744	Meleagris_gallopavo
ENSXCOG00000001875	tdrd3	97	47.990	ENSMAUG00000012562	Tdrd3	99	47.685	Mesocricetus_auratus
ENSXCOG00000001875	tdrd3	97	48.065	ENSMICG00000009982	TDRD3	100	46.328	Microcebus_murinus
ENSXCOG00000001875	tdrd3	97	49.301	ENSMOCG00000012962	Tdrd3	98	48.917	Microtus_ochrogaster
ENSXCOG00000001875	tdrd3	97	74.968	ENSMMOG00000018156	tdrd3	98	74.968	Mola_mola
ENSXCOG00000001875	tdrd3	55	68.421	ENSMODG00000006316	TDRD3	71	68.421	Monodelphis_domestica
ENSXCOG00000001875	tdrd3	93	77.510	ENSMALG00000015327	tdrd3	98	77.510	Monopterus_albus
ENSXCOG00000001875	tdrd3	97	48.679	MGP_CAROLIEiJ_G0019551	Tdrd3	99	48.744	Mus_caroli
ENSXCOG00000001875	tdrd3	97	48.615	ENSMUSG00000022019	Tdrd3	99	48.302	Mus_musculus
ENSXCOG00000001875	tdrd3	97	49.299	MGP_PahariEiJ_G0030569	Tdrd3	98	48.982	Mus_pahari
ENSXCOG00000001875	tdrd3	97	48.855	MGP_SPRETEiJ_G0020448	Tdrd3	99	48.539	Mus_spretus
ENSXCOG00000001875	tdrd3	82	45.118	ENSMPUG00000009630	TDRD3	91	44.189	Mustela_putorius_furo
ENSXCOG00000001875	tdrd3	92	44.809	ENSMLUG00000000235	TDRD3	98	45.020	Myotis_lucifugus
ENSXCOG00000001875	tdrd3	97	48.125	ENSNGAG00000004523	Tdrd3	98	48.228	Nannospalax_galili
ENSXCOG00000001875	tdrd3	97	77.062	ENSNBRG00000018789	tdrd3	98	77.577	Neolamprologus_brichardi
ENSXCOG00000001875	tdrd3	98	48.276	ENSNLEG00000015920	TDRD3	99	48.025	Nomascus_leucogenys
ENSXCOG00000001875	tdrd3	77	57.872	ENSMEUG00000010114	TDRD3	89	57.872	Notamacropus_eugenii
ENSXCOG00000001875	tdrd3	87	41.076	ENSOPRG00000007868	TDRD3	100	40.767	Ochotona_princeps
ENSXCOG00000001875	tdrd3	97	48.622	ENSODEG00000000576	-	98	48.611	Octodon_degus
ENSXCOG00000001875	tdrd3	68	55.412	ENSODEG00000014559	-	76	56.250	Octodon_degus
ENSXCOG00000001875	tdrd3	97	76.933	ENSONIG00000003233	tdrd3	98	77.320	Oreochromis_niloticus
ENSXCOG00000001875	tdrd3	52	34.107	ENSOANG00000011775	-	100	33.800	Ornithorhynchus_anatinus
ENSXCOG00000001875	tdrd3	97	48.861	ENSOCUG00000014261	TDRD3	98	48.604	Oryctolagus_cuniculus
ENSXCOG00000001875	tdrd3	97	74.452	ENSORLG00000004502	tdrd3	98	74.452	Oryzias_latipes
ENSXCOG00000001875	tdrd3	97	71.594	ENSORLG00020017271	tdrd3	100	71.117	Oryzias_latipes_hni
ENSXCOG00000001875	tdrd3	97	74.581	ENSORLG00015015519	tdrd3	98	74.581	Oryzias_latipes_hsok
ENSXCOG00000001875	tdrd3	97	74.936	ENSOMEG00000015668	tdrd3	98	74.936	Oryzias_melastigma
ENSXCOG00000001875	tdrd3	97	48.731	ENSOGAG00000005898	TDRD3	98	48.731	Otolemur_garnettii
ENSXCOG00000001875	tdrd3	97	48.995	ENSOARG00000006244	TDRD3	99	48.741	Ovis_aries
ENSXCOG00000001875	tdrd3	97	49.189	ENSPPAG00000010477	TDRD3	98	48.936	Pan_paniscus
ENSXCOG00000001875	tdrd3	97	48.436	ENSPPRG00000008512	TDRD3	100	48.181	Panthera_pardus
ENSXCOG00000001875	tdrd3	97	48.436	ENSPTIG00000002537	TDRD3	100	48.181	Panthera_tigris_altaica
ENSXCOG00000001875	tdrd3	98	48.403	ENSPTRG00000005918	TDRD3	100	48.363	Pan_troglodytes
ENSXCOG00000001875	tdrd3	97	49.250	ENSPANG00000019138	TDRD3	99	48.941	Papio_anubis
ENSXCOG00000001875	tdrd3	97	50.955	ENSPKIG00000008894	tdrd3	98	50.955	Paramormyrops_kingsleyae
ENSXCOG00000001875	tdrd3	87	45.957	ENSPSIG00000013821	TDRD3	100	45.804	Pelodiscus_sinensis
ENSXCOG00000001875	tdrd3	97	66.752	ENSPMGG00000015263	tdrd3	98	71.650	Periophthalmus_magnuspinnatus
ENSXCOG00000001875	tdrd3	97	48.561	ENSPEMG00000004287	Tdrd3	98	48.106	Peromyscus_maniculatus_bairdii
ENSXCOG00000001875	tdrd3	97	49.172	ENSPCIG00000011476	-	98	49.299	Phascolarctos_cinereus
ENSXCOG00000001875	tdrd3	97	95.343	ENSPFOG00000012450	tdrd3	98	95.343	Poecilia_formosa
ENSXCOG00000001875	tdrd3	91	94.890	ENSPLAG00000016397	tdrd3	97	94.890	Poecilia_latipinna
ENSXCOG00000001875	tdrd3	91	94.199	ENSPMEG00000019048	tdrd3	99	94.199	Poecilia_mexicana
ENSXCOG00000001875	tdrd3	97	95.731	ENSPREG00000021145	tdrd3	98	95.731	Poecilia_reticulata
ENSXCOG00000001875	tdrd3	97	48.878	ENSPPYG00000005401	TDRD3	99	48.625	Pongo_abelii
ENSXCOG00000001875	tdrd3	87	42.997	ENSPCAG00000014959	TDRD3	100	42.999	Procavia_capensis
ENSXCOG00000001875	tdrd3	74	76.042	ENSPCOG00000019937	TDRD3	100	76.042	Propithecus_coquereli
ENSXCOG00000001875	tdrd3	87	47.207	ENSPVAG00000010549	TDRD3	100	46.919	Pteropus_vampyrus
ENSXCOG00000001875	tdrd3	97	77.062	ENSPNYG00000001569	tdrd3	98	77.448	Pundamilia_nyererei
ENSXCOG00000001875	tdrd3	97	55.764	ENSPNAG00000026219	tdrd3	98	55.597	Pygocentrus_nattereri
ENSXCOG00000001875	tdrd3	87	46.154	ENSRNOG00000009034	Tdrd3	100	46.369	Rattus_norvegicus
ENSXCOG00000001875	tdrd3	99	45.946	ENSRBIG00000031218	TDRD3	99	46.135	Rhinopithecus_bieti
ENSXCOG00000001875	tdrd3	98	48.153	ENSRROG00000044516	TDRD3	99	47.901	Rhinopithecus_roxellana
ENSXCOG00000001875	tdrd3	97	49.252	ENSSBOG00000022790	TDRD3	100	49.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000001875	tdrd3	97	46.096	ENSSHAG00000011994	TDRD3	100	46.028	Sarcophilus_harrisii
ENSXCOG00000001875	tdrd3	97	53.539	ENSSFOG00015005175	tdrd3	95	52.124	Scleropages_formosus
ENSXCOG00000001875	tdrd3	92	75.913	ENSSMAG00000011677	tdrd3	98	75.913	Scophthalmus_maximus
ENSXCOG00000001875	tdrd3	97	79.510	ENSSDUG00000004594	tdrd3	98	79.510	Seriola_dumerili
ENSXCOG00000001875	tdrd3	97	73.874	ENSSLDG00000002918	tdrd3	98	73.874	Seriola_lalandi_dorsalis
ENSXCOG00000001875	tdrd3	87	45.670	ENSSARG00000003028	TDRD3	100	45.455	Sorex_araneus
ENSXCOG00000001875	tdrd3	97	47.909	ENSSPUG00000001191	TDRD3	98	47.864	Sphenodon_punctatus
ENSXCOG00000001875	tdrd3	97	81.032	ENSSPAG00000005342	tdrd3	98	81.032	Stegastes_partitus
ENSXCOG00000001875	tdrd3	97	49.118	ENSSSCG00000009449	TDRD3	98	48.864	Sus_scrofa
ENSXCOG00000001875	tdrd3	97	49.040	ENSTGUG00000012476	-	98	48.912	Taeniopygia_guttata
ENSXCOG00000001875	tdrd3	92	69.553	ENSTRUG00000017194	tdrd3	94	69.987	Takifugu_rubripes
ENSXCOG00000001875	tdrd3	97	67.439	ENSTNIG00000005230	tdrd3	98	67.696	Tetraodon_nigroviridis
ENSXCOG00000001875	tdrd3	87	41.573	ENSTTRG00000010071	TDRD3	99	41.326	Tursiops_truncatus
ENSXCOG00000001875	tdrd3	91	47.410	ENSUAMG00000017369	-	98	47.270	Ursus_americanus
ENSXCOG00000001875	tdrd3	99	43.811	ENSUMAG00000014526	TDRD3	100	46.314	Ursus_maritimus
ENSXCOG00000001875	tdrd3	87	46.862	ENSVPAG00000011763	TDRD3	100	46.573	Vicugna_pacos
ENSXCOG00000001875	tdrd3	98	48.990	ENSVVUG00000029140	TDRD3	97	47.779	Vulpes_vulpes
ENSXCOG00000001875	tdrd3	97	98.448	ENSXMAG00000005103	tdrd3	98	98.448	Xiphophorus_maculatus