EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000001942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2946 bases
Position: chrKQ557225.1:32555601-32558546
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000002436	RVT_1	PF00078.27	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000002470	-	1137	-	ENSXCOP00000002436	378 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000001942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000001942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000001942	-	98	99.462	ENSXCOG00000000265	-	91	99.462
ENSXCOG00000001942	-	100	99.471	ENSXCOG00000008303	-	100	99.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000001942	-	97	70.380	ENSAPOG00000023378	-	90	70.380	Acanthochromis_polyacanthus
ENSXCOG00000001942	-	97	68.665	ENSACIG00000009711	-	99	68.665	Amphilophus_citrinellus
ENSXCOG00000001942	-	56	80.000	ENSAPEG00000022145	-	64	80.000	Amphiprion_percula
ENSXCOG00000001942	-	98	67.914	ENSSMAG00000001572	-	93	67.914	Scophthalmus_maximus
ENSXCOG00000001942	-	75	82.273	ENSSPAG00000022162	-	88	82.273	Stegastes_partitus
ENSXCOG00000001942	-	90	96.176	ENSXMAG00000022668	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.471	ENSXMAG00000027748	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.471	ENSXMAG00000029702	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000001942	-	98	97.305	ENSXMAG00000023963	-	94	97.305	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.765	ENSXMAG00000027368	-	79	96.765	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.765	ENSXMAG00000022344	-	79	96.765	Xiphophorus_maculatus
ENSXCOG00000001942	-	87	96.667	ENSXMAG00000024488	-	78	96.667	Xiphophorus_maculatus
ENSXCOG00000001942	-	87	97.273	ENSXMAG00000029394	-	78	97.273	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.176	ENSXMAG00000023593	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.765	ENSXMAG00000024880	-	79	96.765	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.471	ENSXMAG00000023260	-	79	96.471	Xiphophorus_maculatus
ENSXCOG00000001942	-	87	96.970	ENSXMAG00000022383	-	78	96.970	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.176	ENSXMAG00000026114	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.765	ENSXMAG00000021499	-	79	96.765	Xiphophorus_maculatus
ENSXCOG00000001942	-	99	96.543	ENSXMAG00000025367	-	91	96.543	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.176	ENSXMAG00000029755	-	79	96.176	Xiphophorus_maculatus
ENSXCOG00000001942	-	90	96.176	ENSXMAG00000021792	-	79	96.176	Xiphophorus_maculatus