EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000002135 (Gene tree)
Gene ID: -
Gene Symbol: mrpl40
Alias: fj54c06|wu:fj54c06|zgc:103495
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1486 bases
Position: chrKQ557204.1:19396343-19397828
Accession: ZDB-GENE-040912-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000002677	MRP-L28	PF09812.9	8.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000002712	-	612	-	ENSXCOP00000002677	203 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002135	mrpl40	77	57.595	ENSG00000185608	MRPL40	77	59.494	Homo_sapiens
ENSXCOG00000002135	mrpl40	100	76.355	ENSAPOG00000021291	mrpl40	100	76.355	Acanthochromis_polyacanthus
ENSXCOG00000002135	mrpl40	77	55.696	ENSAMEG00000011421	MRPL40	77	55.696	Ailuropoda_melanoleuca
ENSXCOG00000002135	mrpl40	100	67.980	ENSACIG00000006717	MRPL40	96	67.980	Amphilophus_citrinellus
ENSXCOG00000002135	mrpl40	100	79.412	ENSACIG00000006672	mrpl40	100	79.412	Amphilophus_citrinellus
ENSXCOG00000002135	mrpl40	100	79.803	ENSAOCG00000003216	mrpl40	100	79.803	Amphiprion_ocellaris
ENSXCOG00000002135	mrpl40	100	79.310	ENSAPEG00000017401	mrpl40	100	79.310	Amphiprion_percula
ENSXCOG00000002135	mrpl40	76	82.468	ENSATEG00000020753	mrpl40	91	82.468	Anabas_testudineus
ENSXCOG00000002135	mrpl40	84	56.395	ENSAPLG00000004002	MRPL40	86	56.395	Anas_platyrhynchos
ENSXCOG00000002135	mrpl40	83	57.988	ENSACAG00000001053	MRPL40	85	57.988	Anolis_carolinensis
ENSXCOG00000002135	mrpl40	77	56.329	ENSANAG00000026579	MRPL40	77	58.228	Aotus_nancymaae
ENSXCOG00000002135	mrpl40	100	83.251	ENSACLG00000011106	mrpl40	100	83.251	Astatotilapia_calliptera
ENSXCOG00000002135	mrpl40	100	62.562	ENSAMXG00000029691	mrpl40	100	62.562	Astyanax_mexicanus
ENSXCOG00000002135	mrpl40	77	57.595	ENSBTAG00000019891	MRPL40	77	57.595	Bos_taurus
ENSXCOG00000002135	mrpl40	73	37.419	WBGene00018793	mrpl-40	62	39.831	Caenorhabditis_elegans
ENSXCOG00000002135	mrpl40	77	57.595	ENSCJAG00000001584	MRPL40	76	59.494	Callithrix_jacchus
ENSXCOG00000002135	mrpl40	77	58.861	ENSCAFG00020007995	MRPL40	77	58.861	Canis_lupus_dingo
ENSXCOG00000002135	mrpl40	62	51.969	ENSCHIG00000026872	-	74	51.969	Capra_hircus
ENSXCOG00000002135	mrpl40	77	58.861	ENSCHIG00000000131	-	80	58.599	Capra_hircus
ENSXCOG00000002135	mrpl40	96	52.525	ENSTSYG00000014747	MRPL40	90	52.525	Carlito_syrichta
ENSXCOG00000002135	mrpl40	68	61.594	ENSCAPG00000012876	MRPL40	85	63.636	Cavia_aperea
ENSXCOG00000002135	mrpl40	96	50.490	ENSCPOG00000026802	MRPL40	97	51.961	Cavia_porcellus
ENSXCOG00000002135	mrpl40	77	56.051	ENSCCAG00000037694	MRPL40	79	57.962	Cebus_capucinus
ENSXCOG00000002135	mrpl40	77	56.329	ENSCATG00000031418	-	77	58.228	Cercocebus_atys
ENSXCOG00000002135	mrpl40	77	57.595	ENSCATG00000043592	-	78	57.595	Cercocebus_atys
ENSXCOG00000002135	mrpl40	77	58.861	ENSCLAG00000016629	MRPL40	77	58.861	Chinchilla_lanigera
ENSXCOG00000002135	mrpl40	77	58.861	ENSCSAG00000011593	MRPL40	77	58.861	Chlorocebus_sabaeus
ENSXCOG00000002135	mrpl40	69	53.901	ENSCHOG00000008751	MRPL40	92	53.049	Choloepus_hoffmanni
ENSXCOG00000002135	mrpl40	97	51.531	ENSCPBG00000010618	MRPL40	99	51.531	Chrysemys_picta_bellii
ENSXCOG00000002135	mrpl40	63	40.945	ENSCSAVG00000001505	-	54	42.857	Ciona_savignyi
ENSXCOG00000002135	mrpl40	77	58.861	ENSCANG00000038600	MRPL40	84	58.861	Colobus_angolensis_palliatus
ENSXCOG00000002135	mrpl40	77	60.127	ENSCGRG00001019957	Mrpl40	77	60.127	Cricetulus_griseus_chok1gshd
ENSXCOG00000002135	mrpl40	77	60.127	ENSCGRG00000001245	Mrpl40	77	60.127	Cricetulus_griseus_crigri
ENSXCOG00000002135	mrpl40	74	50.980	ENSCSEG00000012296	-	84	50.980	Cynoglossus_semilaevis
ENSXCOG00000002135	mrpl40	100	71.569	ENSCSEG00000019750	mrpl40	100	71.569	Cynoglossus_semilaevis
ENSXCOG00000002135	mrpl40	100	87.685	ENSCVAG00000018229	mrpl40	100	87.685	Cyprinodon_variegatus
ENSXCOG00000002135	mrpl40	85	65.896	ENSDARG00000043554	mrpl40	100	58.454	Danio_rerio
ENSXCOG00000002135	mrpl40	69	53.571	ENSDNOG00000038360	-	75	51.282	Dasypus_novemcinctus
ENSXCOG00000002135	mrpl40	77	59.494	ENSDORG00000002949	Mrpl40	77	61.392	Dipodomys_ordii
ENSXCOG00000002135	mrpl40	75	40.625	FBgn0037892	mRpL40	82	41.250	Drosophila_melanogaster
ENSXCOG00000002135	mrpl40	50	58.416	ENSETEG00000006816	-	54	58.416	Echinops_telfairi
ENSXCOG00000002135	mrpl40	78	56.604	ENSEASG00005010493	MRPL40	78	56.604	Equus_asinus_asinus
ENSXCOG00000002135	mrpl40	68	57.246	ENSECAG00000009876	MRPL40	96	55.625	Equus_caballus
ENSXCOG00000002135	mrpl40	78	57.233	ENSEEUG00000009268	MRPL40	77	57.233	Erinaceus_europaeus
ENSXCOG00000002135	mrpl40	100	70.732	ENSELUG00000009281	mrpl40	100	70.732	Esox_lucius
ENSXCOG00000002135	mrpl40	77	56.329	ENSFCAG00000002752	MRPL40	77	56.329	Felis_catus
ENSXCOG00000002135	mrpl40	86	56.000	ENSFALG00000007981	MRPL40	97	53.125	Ficedula_albicollis
ENSXCOG00000002135	mrpl40	77	56.051	ENSFDAG00000020940	MRPL40	97	56.051	Fukomys_damarensis
ENSXCOG00000002135	mrpl40	86	57.143	ENSGALG00000053063	MRPL40	60	56.111	Gallus_gallus
ENSXCOG00000002135	mrpl40	100	94.089	ENSGAFG00000000522	mrpl40	100	94.089	Gambusia_affinis
ENSXCOG00000002135	mrpl40	83	57.988	ENSGAGG00000020728	MRPL40	96	52.500	Gopherus_agassizii
ENSXCOG00000002135	mrpl40	77	57.595	ENSGGOG00000012336	MRPL40	77	59.494	Gorilla_gorilla
ENSXCOG00000002135	mrpl40	100	83.251	ENSHBUG00000000404	mrpl40	100	83.251	Haplochromis_burtoni
ENSXCOG00000002135	mrpl40	77	59.873	ENSHGLG00000018525	MRPL40	97	59.873	Heterocephalus_glaber_female
ENSXCOG00000002135	mrpl40	78	59.748	ENSHGLG00100009563	MRPL40	77	60.127	Heterocephalus_glaber_male
ENSXCOG00000002135	mrpl40	100	69.903	ENSHCOG00000005731	mrpl40	100	69.903	Hippocampus_comes
ENSXCOG00000002135	mrpl40	100	64.563	ENSIPUG00000020288	Mrpl40	97	64.563	Ictalurus_punctatus
ENSXCOG00000002135	mrpl40	77	56.329	ENSSTOG00000002887	MRPL40	77	58.228	Ictidomys_tridecemlineatus
ENSXCOG00000002135	mrpl40	77	56.962	ENSJJAG00000017905	Mrpl40	77	58.861	Jaculus_jaculus
ENSXCOG00000002135	mrpl40	100	77.340	ENSKMAG00000003717	mrpl40	100	77.340	Kryptolebias_marmoratus
ENSXCOG00000002135	mrpl40	100	67.488	ENSLBEG00000025203	mrpl40	100	67.488	Labrus_bergylta
ENSXCOG00000002135	mrpl40	86	63.842	ENSLACG00000015070	MRPL40	87	63.842	Latimeria_chalumnae
ENSXCOG00000002135	mrpl40	100	64.706	ENSLOCG00000001879	mrpl40	100	64.706	Lepisosteus_oculatus
ENSXCOG00000002135	mrpl40	77	58.228	ENSLAFG00000011061	MRPL40	77	58.228	Loxodonta_africana
ENSXCOG00000002135	mrpl40	77	56.329	ENSMFAG00000032018	-	77	58.228	Macaca_fascicularis
ENSXCOG00000002135	mrpl40	77	56.329	ENSMFAG00000039890	-	84	56.329	Macaca_fascicularis
ENSXCOG00000002135	mrpl40	77	55.696	ENSMFAG00000001495	-	78	55.696	Macaca_fascicularis
ENSXCOG00000002135	mrpl40	77	55.063	ENSMMUG00000006218	-	88	55.063	Macaca_mulatta
ENSXCOG00000002135	mrpl40	77	55.696	ENSMMUG00000030886	-	77	55.696	Macaca_mulatta
ENSXCOG00000002135	mrpl40	77	56.962	ENSMNEG00000034050	-	77	56.962	Macaca_nemestrina
ENSXCOG00000002135	mrpl40	71	56.944	ENSMNEG00000040492	-	66	61.157	Macaca_nemestrina
ENSXCOG00000002135	mrpl40	77	56.962	ENSMNEG00000041171	-	79	56.962	Macaca_nemestrina
ENSXCOG00000002135	mrpl40	77	57.595	ENSMLEG00000032552	-	78	57.595	Mandrillus_leucophaeus
ENSXCOG00000002135	mrpl40	77	55.696	ENSMLEG00000009022	-	84	55.696	Mandrillus_leucophaeus
ENSXCOG00000002135	mrpl40	77	58.861	ENSMLEG00000030926	-	84	58.861	Mandrillus_leucophaeus
ENSXCOG00000002135	mrpl40	100	79.310	ENSMAMG00000014249	mrpl40	100	79.310	Mastacembelus_armatus
ENSXCOG00000002135	mrpl40	100	83.251	ENSMZEG00005009853	mrpl40	100	83.251	Maylandia_zebra
ENSXCOG00000002135	mrpl40	76	60.645	ENSMGAG00000001177	MRPL40	100	60.645	Meleagris_gallopavo
ENSXCOG00000002135	mrpl40	77	60.127	ENSMAUG00000015350	Mrpl40	77	60.127	Mesocricetus_auratus
ENSXCOG00000002135	mrpl40	78	57.862	ENSMICG00000046066	MRPL40	77	57.862	Microcebus_murinus
ENSXCOG00000002135	mrpl40	77	56.962	ENSMOCG00000016970	Mrpl40	77	58.861	Microtus_ochrogaster
ENSXCOG00000002135	mrpl40	76	84.416	ENSMMOG00000012861	mrpl40	84	84.416	Mola_mola
ENSXCOG00000002135	mrpl40	83	55.294	ENSMODG00000010070	MRPL40	93	55.294	Monodelphis_domestica
ENSXCOG00000002135	mrpl40	100	76.355	ENSMALG00000020778	mrpl40	100	76.355	Monopterus_albus
ENSXCOG00000002135	mrpl40	77	60.127	MGP_CAROLIEiJ_G0020557	Mrpl40	97	59.873	Mus_caroli
ENSXCOG00000002135	mrpl40	77	60.127	ENSMUSG00000022706	Mrpl40	97	59.873	Mus_musculus
ENSXCOG00000002135	mrpl40	77	60.759	MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	Mus_pahari
ENSXCOG00000002135	mrpl40	77	60.127	MGP_SPRETEiJ_G0021452	Mrpl40	97	59.873	Mus_spretus
ENSXCOG00000002135	mrpl40	77	55.696	ENSMPUG00000003865	MRPL40	77	55.696	Mustela_putorius_furo
ENSXCOG00000002135	mrpl40	77	56.329	ENSMLUG00000024620	-	77	58.228	Myotis_lucifugus
ENSXCOG00000002135	mrpl40	77	56.329	ENSMLUG00000002456	-	77	58.228	Myotis_lucifugus
ENSXCOG00000002135	mrpl40	77	60.759	ENSNGAG00000000304	Mrpl40	78	60.759	Nannospalax_galili
ENSXCOG00000002135	mrpl40	68	60.145	ENSNLEG00000005372	MRPL40	98	49.756	Nomascus_leucogenys
ENSXCOG00000002135	mrpl40	77	58.861	ENSODEG00000017051	MRPL40	77	58.861	Octodon_degus
ENSXCOG00000002135	mrpl40	100	82.759	ENSONIG00000014393	mrpl40	100	82.759	Oreochromis_niloticus
ENSXCOG00000002135	mrpl40	97	50.242	ENSOCUG00000009859	MRPL40	73	50.242	Oryctolagus_cuniculus
ENSXCOG00000002135	mrpl40	100	78.325	ENSORLG00000002574	mrpl40	100	78.325	Oryzias_latipes
ENSXCOG00000002135	mrpl40	100	79.310	ENSORLG00020005727	mrpl40	100	79.310	Oryzias_latipes_hni
ENSXCOG00000002135	mrpl40	100	78.818	ENSORLG00015015422	mrpl40	100	78.818	Oryzias_latipes_hsok
ENSXCOG00000002135	mrpl40	100	80.788	ENSOMEG00000017632	mrpl40	100	80.788	Oryzias_melastigma
ENSXCOG00000002135	mrpl40	77	60.127	ENSOGAG00000030071	MRPL40	84	60.127	Otolemur_garnettii
ENSXCOG00000002135	mrpl40	77	56.962	ENSOARG00000017561	MRPL40	76	56.962	Ovis_aries
ENSXCOG00000002135	mrpl40	77	58.228	ENSPPAG00000030349	MRPL40	77	60.127	Pan_paniscus
ENSXCOG00000002135	mrpl40	77	56.962	ENSPPRG00000004672	MRPL40	77	56.962	Panthera_pardus
ENSXCOG00000002135	mrpl40	77	56.962	ENSPTIG00000003393	MRPL40	77	56.962	Panthera_tigris_altaica
ENSXCOG00000002135	mrpl40	77	58.228	ENSPTRG00000014061	MRPL40	77	60.127	Pan_troglodytes
ENSXCOG00000002135	mrpl40	77	58.228	ENSPANG00000000595	-	78	58.228	Papio_anubis
ENSXCOG00000002135	mrpl40	77	58.228	ENSPANG00000007370	-	77	58.228	Papio_anubis
ENSXCOG00000002135	mrpl40	100	56.863	ENSPKIG00000024494	mrpl40	100	56.863	Paramormyrops_kingsleyae
ENSXCOG00000002135	mrpl40	80	57.669	ENSPSIG00000003055	MRPL40	98	58.025	Pelodiscus_sinensis
ENSXCOG00000002135	mrpl40	100	67.980	ENSPMGG00000018388	mrpl40	100	67.980	Periophthalmus_magnuspinnatus
ENSXCOG00000002135	mrpl40	77	59.494	ENSPEMG00000017933	Mrpl40	77	59.494	Peromyscus_maniculatus_bairdii
ENSXCOG00000002135	mrpl40	77	55.063	ENSPCIG00000025479	MRPL40	77	55.063	Phascolarctos_cinereus
ENSXCOG00000002135	mrpl40	100	93.204	ENSPFOG00000012506	mrpl40	97	93.204	Poecilia_formosa
ENSXCOG00000002135	mrpl40	100	93.596	ENSPLAG00000017335	mrpl40	100	93.596	Poecilia_latipinna
ENSXCOG00000002135	mrpl40	100	94.581	ENSPMEG00000003881	mrpl40	100	94.581	Poecilia_mexicana
ENSXCOG00000002135	mrpl40	100	93.596	ENSPREG00000011448	mrpl40	100	93.596	Poecilia_reticulata
ENSXCOG00000002135	mrpl40	77	58.228	ENSPPYG00000011578	MRPL40	84	60.127	Pongo_abelii
ENSXCOG00000002135	mrpl40	64	56.923	ENSPCAG00000007834	MRPL40	59	59.504	Procavia_capensis
ENSXCOG00000002135	mrpl40	77	57.595	ENSPCOG00000014413	MRPL40	77	57.595	Propithecus_coquereli
ENSXCOG00000002135	mrpl40	100	83.251	ENSPNYG00000008216	mrpl40	100	83.251	Pundamilia_nyererei
ENSXCOG00000002135	mrpl40	100	64.706	ENSPNAG00000000310	mrpl40	99	74.026	Pygocentrus_nattereri
ENSXCOG00000002135	mrpl40	77	60.759	ENSRNOG00000049686	Mrpl40	77	60.759	Rattus_norvegicus
ENSXCOG00000002135	mrpl40	77	58.861	ENSRBIG00000023060	MRPL40	77	58.861	Rhinopithecus_bieti
ENSXCOG00000002135	mrpl40	77	58.228	ENSRROG00000043837	MRPL40	77	58.228	Rhinopithecus_roxellana
ENSXCOG00000002135	mrpl40	77	58.228	ENSSBOG00000031050	MRPL40	77	58.228	Saimiri_boliviensis_boliviensis
ENSXCOG00000002135	mrpl40	77	56.329	ENSSHAG00000010239	MRPL40	98	56.329	Sarcophilus_harrisii
ENSXCOG00000002135	mrpl40	88	65.000	ENSSFOG00015014220	mrpl40	92	65.000	Scleropages_formosus
ENSXCOG00000002135	mrpl40	100	73.039	ENSSMAG00000006340	mrpl40	100	73.039	Scophthalmus_maximus
ENSXCOG00000002135	mrpl40	100	71.078	ENSSDUG00000022994	mrpl40	100	71.078	Seriola_dumerili
ENSXCOG00000002135	mrpl40	100	70.588	ENSSLDG00000009671	mrpl40	100	70.588	Seriola_lalandi_dorsalis
ENSXCOG00000002135	mrpl40	77	57.595	ENSSARG00000003051	MRPL40	77	57.595	Sorex_araneus
ENSXCOG00000002135	mrpl40	85	56.069	ENSSPUG00000015559	MRPL40	87	57.803	Sphenodon_punctatus
ENSXCOG00000002135	mrpl40	100	79.310	ENSSPAG00000015481	mrpl40	100	79.310	Stegastes_partitus
ENSXCOG00000002135	mrpl40	78	56.604	ENSSSCG00000034014	MRPL40	77	56.962	Sus_scrofa
ENSXCOG00000002135	mrpl40	60	60.656	ENSTGUG00000008534	MRPL40	100	60.390	Taeniopygia_guttata
ENSXCOG00000002135	mrpl40	99	73.134	ENSTRUG00000025904	mrpl40	100	73.134	Takifugu_rubripes
ENSXCOG00000002135	mrpl40	77	56.962	ENSTTRG00000014932	MRPL40	78	56.962	Tursiops_truncatus
ENSXCOG00000002135	mrpl40	77	56.329	ENSUAMG00000007667	MRPL40	77	56.329	Ursus_americanus
ENSXCOG00000002135	mrpl40	71	54.110	ENSUMAG00000006804	MRPL40	77	54.110	Ursus_maritimus
ENSXCOG00000002135	mrpl40	68	48.921	ENSVVUG00000020719	-	96	41.294	Vulpes_vulpes
ENSXCOG00000002135	mrpl40	77	57.595	ENSVVUG00000025360	-	77	57.595	Vulpes_vulpes
ENSXCOG00000002135	mrpl40	87	58.889	ENSXETG00000018600	mrpl40	90	58.889	Xenopus_tropicalis
ENSXCOG00000002135	mrpl40	100	99.507	ENSXMAG00000014595	mrpl40	100	99.507	Xiphophorus_maculatus