EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000002436 (Gene tree)
Gene ID: -
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 20530 bases
Position: chrKQ557206.1:11850844-11871373
Accession: 19097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003072	RRM_1	PF00076.22	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003109	RBPMS-201	573	-	ENSXCOP00000003072	190 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000002436	RBPMS	89	64.641	ENSXCOG00000000567	rbpms2b	96	65.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002436	RBPMS	98	77.320	ENSG00000157110	RBPMS	97	85.455	Homo_sapiens
ENSXCOG00000002436	RBPMS	90	93.103	ENSAPOG00000022304	RBPMS	90	93.103	Acanthochromis_polyacanthus
ENSXCOG00000002436	RBPMS	80	82.051	ENSAMEG00000001522	RBPMS	71	82.051	Ailuropoda_melanoleuca
ENSXCOG00000002436	RBPMS	60	88.034	ENSACIG00000011395	RBPMS	63	88.034	Amphilophus_citrinellus
ENSXCOG00000002436	RBPMS	90	93.103	ENSAOCG00000007731	RBPMS	90	93.103	Amphiprion_ocellaris
ENSXCOG00000002436	RBPMS	90	93.103	ENSAPEG00000023543	RBPMS	90	93.103	Amphiprion_percula
ENSXCOG00000002436	RBPMS	98	92.513	ENSATEG00000018184	RBPMS	99	92.513	Anabas_testudineus
ENSXCOG00000002436	RBPMS	90	81.250	ENSACAG00000003012	RBPMS	90	79.545	Anolis_carolinensis
ENSXCOG00000002436	RBPMS	98	77.320	ENSANAG00000028150	RBPMS	99	76.923	Aotus_nancymaae
ENSXCOG00000002436	RBPMS	90	93.103	ENSACLG00000002926	RBPMS	90	93.103	Astatotilapia_calliptera
ENSXCOG00000002436	RBPMS	92	87.640	ENSAMXG00000033491	rbpms	92	87.640	Astyanax_mexicanus
ENSXCOG00000002436	RBPMS	99	75.000	ENSBTAG00000033727	RBPMS	80	75.000	Bos_taurus
ENSXCOG00000002436	RBPMS	98	77.320	ENSCJAG00000012366	RBPMS	99	76.923	Callithrix_jacchus
ENSXCOG00000002436	RBPMS	88	77.143	ENSCAFG00000006503	RBPMS	79	77.143	Canis_familiaris
ENSXCOG00000002436	RBPMS	88	77.143	ENSCAFG00020001031	RBPMS	79	77.143	Canis_lupus_dingo
ENSXCOG00000002436	RBPMS	99	74.619	ENSCHIG00000027156	RBPMS	100	74.619	Capra_hircus
ENSXCOG00000002436	RBPMS	56	80.000	ENSTSYG00000013982	RBPMS	83	80.000	Carlito_syrichta
ENSXCOG00000002436	RBPMS	90	81.143	ENSCPOG00000038597	RBPMS	89	81.143	Cavia_porcellus
ENSXCOG00000002436	RBPMS	98	77.320	ENSCCAG00000033226	RBPMS	99	76.923	Cebus_capucinus
ENSXCOG00000002436	RBPMS	98	77.320	ENSCATG00000036486	RBPMS	99	76.923	Cercocebus_atys
ENSXCOG00000002436	RBPMS	89	81.609	ENSCLAG00000001518	RBPMS	100	81.609	Chinchilla_lanigera
ENSXCOG00000002436	RBPMS	88	77.143	ENSCSAG00000015838	RBPMS	79	77.143	Chlorocebus_sabaeus
ENSXCOG00000002436	RBPMS	79	82.468	ENSCHOG00000008745	RBPMS	78	82.468	Choloepus_hoffmanni
ENSXCOG00000002436	RBPMS	90	80.000	ENSCPBG00000013437	RBPMS	90	80.000	Chrysemys_picta_bellii
ENSXCOG00000002436	RBPMS	89	81.609	ENSCANG00000034997	RBPMS	100	81.609	Colobus_angolensis_palliatus
ENSXCOG00000002436	RBPMS	99	71.574	ENSCGRG00001002814	Rbpms	100	75.635	Cricetulus_griseus_chok1gshd
ENSXCOG00000002436	RBPMS	89	76.571	ENSCGRG00000006095	Rbpms	100	81.143	Cricetulus_griseus_crigri
ENSXCOG00000002436	RBPMS	90	93.103	ENSCSEG00000002777	rbpms	96	93.103	Cynoglossus_semilaevis
ENSXCOG00000002436	RBPMS	90	93.103	ENSCVAG00000013975	RBPMS	90	93.103	Cyprinodon_variegatus
ENSXCOG00000002436	RBPMS	87	65.089	ENSDARG00000099396	rbpms	100	65.089	Danio_rerio
ENSXCOG00000002436	RBPMS	79	81.935	ENSDNOG00000008126	RBPMS	71	81.935	Dasypus_novemcinctus
ENSXCOG00000002436	RBPMS	88	77.714	ENSETEG00000017582	RBPMS	79	77.714	Echinops_telfairi
ENSXCOG00000002436	RBPMS	79	82.468	ENSEASG00005016962	RBPMS	78	82.468	Equus_asinus_asinus
ENSXCOG00000002436	RBPMS	88	77.143	ENSECAG00000020735	RBPMS	78	82.468	Equus_caballus
ENSXCOG00000002436	RBPMS	90	89.655	ENSELUG00000009787	rbpms	90	89.655	Esox_lucius
ENSXCOG00000002436	RBPMS	98	77.320	ENSFCAG00000025639	-	99	76.923	Felis_catus
ENSXCOG00000002436	RBPMS	88	47.093	ENSFCAG00000022292	-	87	45.161	Felis_catus
ENSXCOG00000002436	RBPMS	89	81.609	ENSFDAG00000012078	RBPMS	100	81.609	Fukomys_damarensis
ENSXCOG00000002436	RBPMS	89	99.412	ENSFHEG00000000618	rbpms	89	99.412	Fundulus_heteroclitus
ENSXCOG00000002436	RBPMS	67	49.231	ENSGMOG00000009646	-	87	49.231	Gadus_morhua
ENSXCOG00000002436	RBPMS	91	95.349	ENSGAFG00000016566	RBPMS	90	93.103	Gambusia_affinis
ENSXCOG00000002436	RBPMS	90	81.609	ENSGACG00000019471	rbpms	90	81.609	Gasterosteus_aculeatus
ENSXCOG00000002436	RBPMS	63	75.410	ENSGAGG00000023634	RBPMS	54	74.194	Gopherus_agassizii
ENSXCOG00000002436	RBPMS	90	93.103	ENSHBUG00000005888	RBPMS	90	93.103	Haplochromis_burtoni
ENSXCOG00000002436	RBPMS	98	77.320	ENSHGLG00000002303	RBPMS	99	76.923	Heterocephalus_glaber_female
ENSXCOG00000002436	RBPMS	89	81.609	ENSHGLG00100008787	RBPMS	100	81.609	Heterocephalus_glaber_male
ENSXCOG00000002436	RBPMS	90	91.954	ENSHCOG00000005774	rbpms	91	91.954	Hippocampus_comes
ENSXCOG00000002436	RBPMS	90	85.965	ENSIPUG00000012459	RBPMS	91	85.632	Ictalurus_punctatus
ENSXCOG00000002436	RBPMS	98	77.320	ENSSTOG00000026546	RBPMS	99	76.923	Ictidomys_tridecemlineatus
ENSXCOG00000002436	RBPMS	98	77.320	ENSJJAG00000014024	Rbpms	99	76.923	Jaculus_jaculus
ENSXCOG00000002436	RBPMS	92	70.950	ENSKMAG00000006377	RBPMS	91	73.743	Kryptolebias_marmoratus
ENSXCOG00000002436	RBPMS	91	92.571	ENSLBEG00000027989	RBPMS	98	92.571	Labrus_bergylta
ENSXCOG00000002436	RBPMS	94	83.516	ENSLOCG00000013199	RBPMS	100	83.516	Lepisosteus_oculatus
ENSXCOG00000002436	RBPMS	89	75.568	ENSLAFG00000000209	RBPMS	80	75.568	Loxodonta_africana
ENSXCOG00000002436	RBPMS	98	77.320	ENSMFAG00000036911	RBPMS	99	76.923	Macaca_fascicularis
ENSXCOG00000002436	RBPMS	98	77.320	ENSMMUG00000000458	RBPMS	99	76.923	Macaca_mulatta
ENSXCOG00000002436	RBPMS	98	77.320	ENSMNEG00000043805	RBPMS	99	76.923	Macaca_nemestrina
ENSXCOG00000002436	RBPMS	89	81.609	ENSMLEG00000015635	RBPMS	100	81.609	Mandrillus_leucophaeus
ENSXCOG00000002436	RBPMS	85	67.879	ENSMAMG00000004604	RBPMS	84	67.879	Mastacembelus_armatus
ENSXCOG00000002436	RBPMS	92	92.090	ENSMZEG00005000698	RBPMS	99	92.090	Maylandia_zebra
ENSXCOG00000002436	RBPMS	91	78.977	ENSMGAG00000005088	RBPMS	90	78.977	Meleagris_gallopavo
ENSXCOG00000002436	RBPMS	99	71.574	ENSMAUG00000018892	Rbpms	100	75.635	Mesocricetus_auratus
ENSXCOG00000002436	RBPMS	90	76.571	ENSMICG00000001295	RBPMS	89	80.571	Microcebus_murinus
ENSXCOG00000002436	RBPMS	99	71.574	ENSMOCG00000014009	Rbpms	100	75.635	Microtus_ochrogaster
ENSXCOG00000002436	RBPMS	84	88.344	ENSMMOG00000012036	RBPMS	69	88.344	Mola_mola
ENSXCOG00000002436	RBPMS	90	81.714	ENSMODG00000019006	RBPMS	83	81.714	Monodelphis_domestica
ENSXCOG00000002436	RBPMS	90	90.230	ENSMALG00000003261	RBPMS	93	90.230	Monopterus_albus
ENSXCOG00000002436	RBPMS	99	71.066	MGP_CAROLIEiJ_G0030970	Rbpms	100	75.127	Mus_caroli
ENSXCOG00000002436	RBPMS	99	71.066	ENSMUSG00000031586	Rbpms	100	75.127	Mus_musculus
ENSXCOG00000002436	RBPMS	99	70.558	MGP_PahariEiJ_G0021439	Rbpms	100	74.619	Mus_pahari
ENSXCOG00000002436	RBPMS	99	71.066	MGP_SPRETEiJ_G0032087	Rbpms	100	75.127	Mus_spretus
ENSXCOG00000002436	RBPMS	80	82.051	ENSMPUG00000011314	RBPMS	71	82.051	Mustela_putorius_furo
ENSXCOG00000002436	RBPMS	90	81.143	ENSMLUG00000009391	RBPMS	89	81.143	Myotis_lucifugus
ENSXCOG00000002436	RBPMS	88	77.143	ENSNGAG00000011141	Rbpms	79	77.143	Nannospalax_galili
ENSXCOG00000002436	RBPMS	92	92.090	ENSNBRG00000003313	RBPMS	99	92.090	Neolamprologus_brichardi
ENSXCOG00000002436	RBPMS	90	81.143	ENSNLEG00000036183	-	89	81.143	Nomascus_leucogenys
ENSXCOG00000002436	RBPMS	65	73.846	ENSOPRG00000013151	RBPMS	59	73.846	Ochotona_princeps
ENSXCOG00000002436	RBPMS	98	77.320	ENSODEG00000006700	RBPMS	99	76.923	Octodon_degus
ENSXCOG00000002436	RBPMS	90	93.678	ENSONIG00000007546	RBPMS	100	93.678	Oreochromis_niloticus
ENSXCOG00000002436	RBPMS	88	77.143	ENSOCUG00000008572	RBPMS	79	77.143	Oryctolagus_cuniculus
ENSXCOG00000002436	RBPMS	90	92.529	ENSORLG00000004135	-	90	92.529	Oryzias_latipes
ENSXCOG00000002436	RBPMS	89	98.824	ENSORLG00020016179	RBPMS	91	98.824	Oryzias_latipes_hni
ENSXCOG00000002436	RBPMS	90	92.529	ENSORLG00015013770	RBPMS	90	92.529	Oryzias_latipes_hsok
ENSXCOG00000002436	RBPMS	90	93.103	ENSOMEG00000005044	RBPMS	90	93.642	Oryzias_melastigma
ENSXCOG00000002436	RBPMS	91	75.978	ENSOGAG00000030298	RBPMS	79	75.978	Otolemur_garnettii
ENSXCOG00000002436	RBPMS	58	79.646	ENSOARG00000010366	RBPMS	80	79.646	Ovis_aries
ENSXCOG00000002436	RBPMS	89	81.609	ENSPPAG00000033108	RBPMS	100	81.609	Pan_paniscus
ENSXCOG00000002436	RBPMS	98	77.320	ENSPPRG00000004836	RBPMS	99	76.923	Panthera_pardus
ENSXCOG00000002436	RBPMS	89	81.609	ENSPTIG00000015964	RBPMS	89	81.609	Panthera_tigris_altaica
ENSXCOG00000002436	RBPMS	98	77.320	ENSPTRG00000020135	RBPMS	99	76.923	Pan_troglodytes
ENSXCOG00000002436	RBPMS	98	77.320	ENSPANG00000008143	RBPMS	99	76.923	Papio_anubis
ENSXCOG00000002436	RBPMS	90	86.782	ENSPKIG00000000535	-	93	86.782	Paramormyrops_kingsleyae
ENSXCOG00000002436	RBPMS	90	85.057	ENSPKIG00000004836	rbpms	92	85.057	Paramormyrops_kingsleyae
ENSXCOG00000002436	RBPMS	91	78.977	ENSPSIG00000006136	RBPMS	100	78.977	Pelodiscus_sinensis
ENSXCOG00000002436	RBPMS	88	84.302	ENSPMGG00000018012	RBPMS	80	84.302	Periophthalmus_magnuspinnatus
ENSXCOG00000002436	RBPMS	99	71.717	ENSPEMG00000021130	Rbpms	100	75.253	Peromyscus_maniculatus_bairdii
ENSXCOG00000002436	RBPMS	90	80.571	ENSPCIG00000019298	-	72	75.723	Phascolarctos_cinereus
ENSXCOG00000002436	RBPMS	90	93.103	ENSPFOG00000017158	RBPMS	90	93.103	Poecilia_formosa
ENSXCOG00000002436	RBPMS	90	93.103	ENSPLAG00000010767	RBPMS	90	93.103	Poecilia_latipinna
ENSXCOG00000002436	RBPMS	90	93.103	ENSPMEG00000009788	RBPMS	90	93.103	Poecilia_mexicana
ENSXCOG00000002436	RBPMS	90	93.103	ENSPREG00000016959	RBPMS	90	93.103	Poecilia_reticulata
ENSXCOG00000002436	RBPMS	88	77.143	ENSPPYG00000018487	RBPMS	79	77.143	Pongo_abelii
ENSXCOG00000002436	RBPMS	56	80.000	ENSPCAG00000013493	-	100	80.000	Procavia_capensis
ENSXCOG00000002436	RBPMS	69	77.273	ENSPCOG00000015948	RBPMS	74	78.906	Propithecus_coquereli
ENSXCOG00000002436	RBPMS	89	75.568	ENSPVAG00000001661	RBPMS	80	75.568	Pteropus_vampyrus
ENSXCOG00000002436	RBPMS	92	92.090	ENSPNYG00000001172	RBPMS	99	92.090	Pundamilia_nyererei
ENSXCOG00000002436	RBPMS	90	90.230	ENSPNAG00000029160	RBPMS	90	90.230	Pygocentrus_nattereri
ENSXCOG00000002436	RBPMS	92	69.780	ENSRNOG00000013328	Rbpms	88	74.176	Rattus_norvegicus
ENSXCOG00000002436	RBPMS	89	81.609	ENSRBIG00000038218	RBPMS	100	81.609	Rhinopithecus_bieti
ENSXCOG00000002436	RBPMS	98	77.320	ENSRROG00000042518	RBPMS	99	76.923	Rhinopithecus_roxellana
ENSXCOG00000002436	RBPMS	98	76.804	ENSSBOG00000026670	RBPMS	98	76.804	Saimiri_boliviensis_boliviensis
ENSXCOG00000002436	RBPMS	90	81.143	ENSSHAG00000010114	RBPMS	90	81.143	Sarcophilus_harrisii
ENSXCOG00000002436	RBPMS	90	89.080	ENSSFOG00015000417	rbpms	90	89.080	Scleropages_formosus
ENSXCOG00000002436	RBPMS	91	83.523	ENSSFOG00015017481	-	92	83.333	Scleropages_formosus
ENSXCOG00000002436	RBPMS	90	93.103	ENSSMAG00000010871	rbpms	90	93.103	Scophthalmus_maximus
ENSXCOG00000002436	RBPMS	96	88.649	ENSSDUG00000010894	RBPMS	96	88.649	Seriola_dumerili
ENSXCOG00000002436	RBPMS	90	93.103	ENSSLDG00000012916	RBPMS	90	93.103	Seriola_lalandi_dorsalis
ENSXCOG00000002436	RBPMS	88	74.138	ENSSARG00000000274	RBPMS	79	74.138	Sorex_araneus
ENSXCOG00000002436	RBPMS	90	80.571	ENSSPUG00000017525	RBPMS	67	80.571	Sphenodon_punctatus
ENSXCOG00000002436	RBPMS	89	71.098	ENSSPAG00000004777	rbpms	88	71.098	Stegastes_partitus
ENSXCOG00000002436	RBPMS	98	77.320	ENSSSCG00000015846	RBPMS	99	76.923	Sus_scrofa
ENSXCOG00000002436	RBPMS	90	80.000	ENSTGUG00000001776	RBPMS	92	80.000	Taeniopygia_guttata
ENSXCOG00000002436	RBPMS	93	91.061	ENSTRUG00000000041	RBPMS	90	91.379	Takifugu_rubripes
ENSXCOG00000002436	RBPMS	89	75.429	ENSTTRG00000012451	RBPMS	80	75.429	Tursiops_truncatus
ENSXCOG00000002436	RBPMS	59	76.522	ENSUAMG00000026353	RBPMS	75	76.522	Ursus_americanus
ENSXCOG00000002436	RBPMS	84	80.488	ENSUMAG00000007347	RBPMS	76	82.051	Ursus_maritimus
ENSXCOG00000002436	RBPMS	79	82.468	ENSVPAG00000010991	RBPMS	78	82.468	Vicugna_pacos
ENSXCOG00000002436	RBPMS	98	77.320	ENSVVUG00000019770	RBPMS	99	76.923	Vulpes_vulpes
ENSXCOG00000002436	RBPMS	89	81.609	ENSXETG00000011290	rbpms	100	81.609	Xenopus_tropicalis
ENSXCOG00000002436	RBPMS	90	93.103	ENSXMAG00000027637	RBPMS	90	93.103	Xiphophorus_maculatus