EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000002490 (Gene tree)
Gene ID
-
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH N(6)-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
4240 bases
Position
chrKQ557225.1:33674367-33678606
Accession
ZDB-GENE-040426-2786
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000003149YTHPF04146.155.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000003186-1743-ENSXCOP00000003149580 (aa)--
Gene Model
Click here to download ENSXCOG00000002490's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002490's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000002490ythdf19576.370ENSXCOG00000008115YTHDF19675.421
ENSXCOG00000002490ythdf19460.417ENSXCOG00000009687ythdf39659.445
ENSXCOG00000002490ythdf19458.997ENSXCOG00000004960ythdf29760.276
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000002490ythdf19373.626ENSG00000149658YTHDF19672.563Homo_sapiens
ENSXCOG00000002490ythdf19279.310ENSAPOG00000010796YTHDF19680.216Acanthochromis_polyacanthus
ENSXCOG00000002490ythdf19690.123ENSAPOG00000004358ythdf19890.300Acanthochromis_polyacanthus
ENSXCOG00000002490ythdf19372.037ENSAMEG00000017323YTHDF19572.252Ailuropoda_melanoleuca
ENSXCOG00000002490ythdf19280.784ENSACIG00000020083YTHDF19680.657Amphilophus_citrinellus
ENSXCOG00000002490ythdf19285.662ENSACIG00000011264ythdf19686.176Amphilophus_citrinellus
ENSXCOG00000002490ythdf19279.439ENSAOCG00000012567YTHDF19679.781Amphiprion_ocellaris
ENSXCOG00000002490ythdf19289.815ENSAOCG00000022251ythdf19689.982Amphiprion_ocellaris
ENSXCOG00000002490ythdf19279.626ENSAPEG00000008750YTHDF19679.964Amphiprion_percula
ENSXCOG00000002490ythdf19386.911ENSAPEG00000021878ythdf19587.179Amphiprion_percula
ENSXCOG00000002490ythdf19288.909ENSATEG00000023840ythdf19889.189Anabas_testudineus
ENSXCOG00000002490ythdf19280.819ENSATEG00000005996YTHDF19680.292Anabas_testudineus
ENSXCOG00000002490ythdf19373.260ENSAPLG00000005985YTHDF19672.777Anas_platyrhynchos
ENSXCOG00000002490ythdf19373.443ENSACAG00000005560YTHDF19672.973Anolis_carolinensis
ENSXCOG00000002490ythdf19373.519ENSANAG00000034786-9872.039Aotus_nancymaae
ENSXCOG00000002490ythdf19461.496ENSANAG00000021022-9560.949Aotus_nancymaae
ENSXCOG00000002490ythdf19279.775ENSACLG00000025518YTHDF19580.474Astatotilapia_calliptera
ENSXCOG00000002490ythdf19271.508ENSBTAG00000010383YTHDF19869.942Bos_taurus
ENSXCOG00000002490ythdf19373.333ENSCJAG00000010056YTHDF19672.445Callithrix_jacchus
ENSXCOG00000002490ythdf18772.387ENSCAFG00000012772YTHDF19871.839Canis_familiaris
ENSXCOG00000002490ythdf18772.387ENSCAFG00020001214YTHDF19871.839Canis_lupus_dingo
ENSXCOG00000002490ythdf19271.747ENSCHIG00000026494YTHDF19770.450Capra_hircus
ENSXCOG00000002490ythdf19372.744ENSTSYG00000033436YTHDF19772.826Carlito_syrichta
ENSXCOG00000002490ythdf19671.352ENSCAPG00000002544YTHDF19369.965Cavia_aperea
ENSXCOG00000002490ythdf19372.222ENSCPOG00000010202YTHDF19670.833Cavia_porcellus
ENSXCOG00000002490ythdf19472.313ENSCCAG00000024650YTHDF19672.464Cebus_capucinus
ENSXCOG00000002490ythdf19373.519ENSCATG00000033272YTHDF19672.777Cercocebus_atys
ENSXCOG00000002490ythdf19472.072ENSCLAG00000005989YTHDF19772.414Chinchilla_lanigera
ENSXCOG00000002490ythdf19373.519ENSCSAG00000016266YTHDF19672.777Chlorocebus_sabaeus
ENSXCOG00000002490ythdf19374.217ENSCPBG00000027183YTHDF19673.321Chrysemys_picta_bellii
ENSXCOG00000002490ythdf19373.333ENSCANG00000029082YTHDF19572.595Colobus_angolensis_palliatus
ENSXCOG00000002490ythdf19472.727ENSCGRG00001016568Ythdf19672.080Cricetulus_griseus_chok1gshd
ENSXCOG00000002490ythdf19372.963ENSCGRG00000009207Ythdf19772.080Cricetulus_griseus_crigri
ENSXCOG00000002490ythdf19286.852ENSCSEG00000020623YTHDF19887.207Cynoglossus_semilaevis
ENSXCOG00000002490ythdf19280.224ENSCVAG00000014378YTHDF19879.211Cyprinodon_variegatus
ENSXCOG00000002490ythdf19691.950ENSCVAG00000017940ythdf19991.950Cyprinodon_variegatus
ENSXCOG00000002490ythdf19481.043ENSDARG00000016447ythdf19480.656Danio_rerio
ENSXCOG00000002490ythdf19371.743ENSDNOG00000043590YTHDF19672.364Dasypus_novemcinctus
ENSXCOG00000002490ythdf19470.054ENSDORG00000002879Ythdf19469.735Dipodomys_ordii
ENSXCOG00000002490ythdf17658.503ENSETEG00000017860-9858.503Echinops_telfairi
ENSXCOG00000002490ythdf19473.237ENSEASG00005023186YTHDF19672.364Equus_asinus_asinus
ENSXCOG00000002490ythdf19473.588ENSECAG00000019475YTHDF19872.147Equus_caballus
ENSXCOG00000002490ythdf18872.254ENSEEUG00000007461YTHDF19871.429Erinaceus_europaeus
ENSXCOG00000002490ythdf18976.415ENSELUG00000001906YTHDF19877.820Esox_lucius
ENSXCOG00000002490ythdf19582.069ENSELUG00000022768ythdf19880.375Esox_lucius
ENSXCOG00000002490ythdf19271.828ENSFCAG00000008917YTHDF19672.080Felis_catus
ENSXCOG00000002490ythdf19373.481ENSFALG00000010463YTHDF19672.333Ficedula_albicollis
ENSXCOG00000002490ythdf19770.671ENSFDAG00000019602YTHDF19869.877Fukomys_damarensis
ENSXCOG00000002490ythdf19280.784ENSFHEG00000002540YTHDF19879.891Fundulus_heteroclitus
ENSXCOG00000002490ythdf19594.043ENSFHEG00000023218ythdf19893.321Fundulus_heteroclitus
ENSXCOG00000002490ythdf15180.503ENSGMOG00000019610ythdf19380.279Gadus_morhua
ENSXCOG00000002490ythdf19372.794ENSGALG00000005745YTHDF19872.008Gallus_gallus
ENSXCOG00000002490ythdf19476.804ENSGAFG00000021100YTHDF19878.315Gambusia_affinis
ENSXCOG00000002490ythdf19286.101ENSGACG00000012014ythdf19486.467Gasterosteus_aculeatus
ENSXCOG00000002490ythdf19478.622ENSGACG00000002613YTHDF19678.975Gasterosteus_aculeatus
ENSXCOG00000002490ythdf19373.849ENSGAGG00000003007YTHDF19673.273Gopherus_agassizii
ENSXCOG00000002490ythdf19473.429ENSGGOG00000008340YTHDF19672.563Gorilla_gorilla
ENSXCOG00000002490ythdf19387.102ENSHBUG00000011284ythdf19887.566Haplochromis_burtoni
ENSXCOG00000002490ythdf19279.588ENSHBUG00000004875YTHDF19580.292Haplochromis_burtoni
ENSXCOG00000002490ythdf19372.677ENSHGLG00000006585YTHDF19672.445Heterocephalus_glaber_female
ENSXCOG00000002490ythdf19372.677ENSHGLG00100004683YTHDF19672.445Heterocephalus_glaber_male
ENSXCOG00000002490ythdf19683.562ENSHCOG00000008866ythdf19783.562Hippocampus_comes
ENSXCOG00000002490ythdf19474.483ENSHCOG00000011303YTHDF19878.072Hippocampus_comes
ENSXCOG00000002490ythdf19380.699ENSIPUG00000000425Ythdf19680.399Ictalurus_punctatus
ENSXCOG00000002490ythdf19372.778ENSSTOG00000023001YTHDF19772.777Ictidomys_tridecemlineatus
ENSXCOG00000002490ythdf19472.727ENSJJAG00000013589Ythdf19771.949Jaculus_jaculus
ENSXCOG00000002490ythdf19280.597ENSKMAG00000017472YTHDF19878.853Kryptolebias_marmoratus
ENSXCOG00000002490ythdf19388.652ENSKMAG00000005595ythdf19789.599Kryptolebias_marmoratus
ENSXCOG00000002490ythdf19389.522ENSLBEG00000014105ythdf19489.568Labrus_bergylta
ENSXCOG00000002490ythdf19279.228ENSLBEG00000012068YTHDF19679.032Labrus_bergylta
ENSXCOG00000002490ythdf19471.993ENSLACG00000014195YTHDF19872.531Latimeria_chalumnae
ENSXCOG00000002490ythdf19475.045ENSLOCG00000005020ythdf19376.396Lepisosteus_oculatus
ENSXCOG00000002490ythdf19373.383ENSLAFG00000008884YTHDF19672.678Loxodonta_africana
ENSXCOG00000002490ythdf19373.519ENSMFAG00000042868YTHDF19672.777Macaca_fascicularis
ENSXCOG00000002490ythdf19573.056ENSMMUG00000009227YTHDF19672.777Macaca_mulatta
ENSXCOG00000002490ythdf19373.519ENSMNEG00000030851YTHDF19672.777Macaca_nemestrina
ENSXCOG00000002490ythdf19473.540ENSMLEG00000009252YTHDF19772.777Mandrillus_leucophaeus
ENSXCOG00000002490ythdf19280.224ENSMAMG00000011072YTHDF19680.146Mastacembelus_armatus
ENSXCOG00000002490ythdf19386.067ENSMAMG00000024255ythdf19882.812Mastacembelus_armatus
ENSXCOG00000002490ythdf19279.588ENSMZEG00005023596YTHDF19580.292Maylandia_zebra
ENSXCOG00000002490ythdf19289.214ENSMZEG00005026397ythdf19889.146Maylandia_zebra
ENSXCOG00000002490ythdf19373.077ENSMGAG00000006139YTHDF19672.595Meleagris_gallopavo
ENSXCOG00000002490ythdf19472.860ENSMAUG00000017660Ythdf19771.949Mesocricetus_auratus
ENSXCOG00000002490ythdf19372.828ENSMICG00000032266YTHDF19672.131Microcebus_murinus
ENSXCOG00000002490ythdf19373.148ENSMOCG00000013573Ythdf19672.182Microtus_ochrogaster
ENSXCOG00000002490ythdf19284.063ENSMMOG00000017500ythdf19584.812Mola_mola
ENSXCOG00000002490ythdf19476.724ENSMMOG00000020467YTHDF19376.990Mola_mola
ENSXCOG00000002490ythdf18773.622ENSMODG00000016842YTHDF19872.868Monodelphis_domestica
ENSXCOG00000002490ythdf19279.592ENSMALG00000022209YTHDF19678.947Monopterus_albus
ENSXCOG00000002490ythdf19388.665ENSMALG00000015672ythdf19788.298Monopterus_albus
ENSXCOG00000002490ythdf19372.963MGP_CAROLIEiJ_G0024790Ythdf19672.080Mus_caroli
ENSXCOG00000002490ythdf19372.963ENSMUSG00000038848Ythdf19672.080Mus_musculus
ENSXCOG00000002490ythdf19372.963MGP_PahariEiJ_G0026237Ythdf19672.080Mus_pahari
ENSXCOG00000002490ythdf19372.963MGP_SPRETEiJ_G0025715Ythdf19672.080Mus_spretus
ENSXCOG00000002490ythdf18770.891ENSMPUG00000008111YTHDF19869.981Mustela_putorius_furo
ENSXCOG00000002490ythdf19472.744ENSMLUG00000002241YTHDF19672.352Myotis_lucifugus
ENSXCOG00000002490ythdf19373.148ENSNGAG00000000334Ythdf19672.495Nannospalax_galili
ENSXCOG00000002490ythdf19279.588ENSNBRG00000015321YTHDF19580.292Neolamprologus_brichardi
ENSXCOG00000002490ythdf19386.667ENSNBRG00000008213ythdf19686.964Neolamprologus_brichardi
ENSXCOG00000002490ythdf19368.343ENSOPRG00000001758-9967.412Ochotona_princeps
ENSXCOG00000002490ythdf19259.444ENSODEG00000000074-9359.524Octodon_degus
ENSXCOG00000002490ythdf19670.796ENSODEG00000004380-9671.767Octodon_degus
ENSXCOG00000002490ythdf19387.611ENSONIG00000016799ythdf19687.868Oreochromis_niloticus
ENSXCOG00000002490ythdf19373.529ENSOANG00000003723YTHDF19673.042Ornithorhynchus_anatinus
ENSXCOG00000002490ythdf19385.310ENSORLG00000014665YTHDF19485.442Oryzias_latipes
ENSXCOG00000002490ythdf19279.963ENSORLG00000009739YTHDF19879.529Oryzias_latipes
ENSXCOG00000002490ythdf19279.777ENSORLG00020001332YTHDF19879.640Oryzias_latipes_hni
ENSXCOG00000002490ythdf19385.664ENSORLG00020000307ythdf19485.789Oryzias_latipes_hni
ENSXCOG00000002490ythdf19279.592ENSORLG00015018321YTHDF19879.167Oryzias_latipes_hsok
ENSXCOG00000002490ythdf19385.487ENSORLG00015006302ythdf19485.615Oryzias_latipes_hsok
ENSXCOG00000002490ythdf19386.879ENSOMEG00000002941YTHDF19984.348Oryzias_melastigma
ENSXCOG00000002490ythdf19477.163ENSOMEG00000011843YTHDF19476.684Oryzias_melastigma
ENSXCOG00000002490ythdf19372.007ENSOGAG00000000480YTHDF19671.326Otolemur_garnettii
ENSXCOG00000002490ythdf19269.981ENSOARG00000011639YTHDF19568.043Ovis_aries
ENSXCOG00000002490ythdf19473.429ENSPPAG00000023277YTHDF19772.464Pan_paniscus
ENSXCOG00000002490ythdf19272.388ENSPPRG00000020805YTHDF19672.202Panthera_pardus
ENSXCOG00000002490ythdf18079.018ENSPTIG00000017355YTHDF19668.784Panthera_tigris_altaica
ENSXCOG00000002490ythdf19473.429ENSPTRG00000013730YTHDF19672.563Pan_troglodytes
ENSXCOG00000002490ythdf19373.519ENSPANG00000021472YTHDF19672.777Papio_anubis
ENSXCOG00000002490ythdf19573.333ENSPKIG00000005427ythdf19871.993Paramormyrops_kingsleyae
ENSXCOG00000002490ythdf19474.014ENSPKIG00000005026YTHDF19774.107Paramormyrops_kingsleyae
ENSXCOG00000002490ythdf19472.744ENSPSIG00000005529YTHDF19672.793Pelodiscus_sinensis
ENSXCOG00000002490ythdf19384.588ENSPMGG00000015328ythdf19885.940Periophthalmus_magnuspinnatus
ENSXCOG00000002490ythdf19279.078ENSPMGG00000009101YTHDF19878.646Periophthalmus_magnuspinnatus
ENSXCOG00000002490ythdf19472.993ENSPEMG00000020199Ythdf19971.898Peromyscus_maniculatus_bairdii
ENSXCOG00000002490ythdf19473.285ENSPCIG00000017170YTHDF19873.062Phascolarctos_cinereus
ENSXCOG00000002490ythdf19694.580ENSPFOG00000005405ythdf19494.580Poecilia_formosa
ENSXCOG00000002490ythdf19575.897ENSPLAG00000006298YTHDF19475.845Poecilia_latipinna
ENSXCOG00000002490ythdf19697.658ENSPLAG00000006653ythdf19897.658Poecilia_latipinna
ENSXCOG00000002490ythdf19698.022ENSPMEG00000023753ythdf19898.022Poecilia_mexicana
ENSXCOG00000002490ythdf19476.804ENSPMEG00000020969-9677.778Poecilia_mexicana
ENSXCOG00000002490ythdf19698.378ENSPREG00000002173ythdf19898.378Poecilia_reticulata
ENSXCOG00000002490ythdf19675.891ENSPREG00000017662YTHDF19674.791Poecilia_reticulata
ENSXCOG00000002490ythdf18385.787ENSPPYG00000011226YTHDF19787.879Pongo_abelii
ENSXCOG00000002490ythdf18770.923ENSPCAG00000002452YTHDF110069.598Procavia_capensis
ENSXCOG00000002490ythdf19373.198ENSPCOG00000025969YTHDF19672.495Propithecus_coquereli
ENSXCOG00000002490ythdf19468.257ENSPVAG00000017568YTHDF19768.132Pteropus_vampyrus
ENSXCOG00000002490ythdf19279.588ENSPNYG00000002266YTHDF19580.292Pundamilia_nyererei
ENSXCOG00000002490ythdf19289.214ENSPNYG00000014007ythdf19889.146Pundamilia_nyererei
ENSXCOG00000002490ythdf19481.501ENSPNAG00000012447ythdf19779.455Pygocentrus_nattereri
ENSXCOG00000002490ythdf19372.963ENSRNOG00000027015Ythdf19672.263Rattus_norvegicus
ENSXCOG00000002490ythdf19372.778ENSRBIG00000044959YTHDF19671.949Rhinopithecus_bieti
ENSXCOG00000002490ythdf19372.778ENSRROG00000033014YTHDF19671.949Rhinopithecus_roxellana
ENSXCOG00000002490ythdf19769.718ENSSBOG00000027278YTHDF19870.680Saimiri_boliviensis_boliviensis
ENSXCOG00000002490ythdf19373.529ENSSHAG00000010430YTHDF18573.770Sarcophilus_harrisii
ENSXCOG00000002490ythdf19476.523ENSSFOG00015000284ythdf19476.814Scleropages_formosus
ENSXCOG00000002490ythdf17492.941ENSSMAG00000013715ythdf19688.462Scophthalmus_maximus
ENSXCOG00000002490ythdf19184.643ENSSMAG00000007635YTHDF19379.107Scophthalmus_maximus
ENSXCOG00000002490ythdf19280.899ENSSDUG00000015823YTHDF19679.853Seriola_dumerili
ENSXCOG00000002490ythdf19290.608ENSSDUG00000000435ythdf19790.681Seriola_dumerili
ENSXCOG00000002490ythdf19475.211ENSSLDG00000001054YTHDF19474.916Seriola_lalandi_dorsalis
ENSXCOG00000002490ythdf19386.585ENSSLDG00000024948ythdf19586.860Seriola_lalandi_dorsalis
ENSXCOG00000002490ythdf18773.137ENSSPUG00000015143YTHDF19872.340Sphenodon_punctatus
ENSXCOG00000002490ythdf19378.637ENSSPAG00000003666YTHDF19678.597Stegastes_partitus
ENSXCOG00000002490ythdf19386.482ENSSPAG00000014989ythdf19587.267Stegastes_partitus
ENSXCOG00000002490ythdf19372.356ENSSSCG00000040086YTHDF19671.168Sus_scrofa
ENSXCOG00000002490ythdf19372.794ENSTGUG00000007565YTHDF19772.595Taeniopygia_guttata
ENSXCOG00000002490ythdf19383.803ENSTRUG00000004288ythdf19783.966Takifugu_rubripes
ENSXCOG00000002490ythdf19277.018ENSTRUG00000005049YTHDF19776.672Takifugu_rubripes
ENSXCOG00000002490ythdf19282.900ENSTNIG00000012490ythdf19583.636Tetraodon_nigroviridis
ENSXCOG00000002490ythdf19277.674ENSTNIG00000003975YTHDF19577.431Tetraodon_nigroviridis
ENSXCOG00000002490ythdf19472.212ENSTTRG00000001804YTHDF19671.846Tursiops_truncatus
ENSXCOG00000002490ythdf19471.585ENSUAMG00000011021YTHDF19872.287Ursus_americanus
ENSXCOG00000002490ythdf18771.992ENSUMAG00000022290YTHDF19872.093Ursus_maritimus
ENSXCOG00000002490ythdf18772.387ENSVVUG00000015275YTHDF19871.648Vulpes_vulpes
ENSXCOG00000002490ythdf19572.824ENSXETG00000027086ythdf19672.291Xenopus_tropicalis
ENSXCOG00000002490ythdf19599.091ENSXMAG00000008525ythdf19699.091Xiphophorus_maculatus
ENSXCOG00000002490ythdf19279.664ENSXMAG00000015644YTHDF19879.032Xiphophorus_maculatus

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