EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000002547 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: si:dkey-19e4.5
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2121 bases
Position: chrKQ557206.1:14099235-14101355
Accession: ZDB-GENE-030131-1852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003232	PTH2	PF01981.16	8.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003269	-	555	-	ENSXCOP00000003232	184 (aa)	-	UPI0003B57116

Gene Model

Click here to download ENSXCOG00000002547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000002547	si:dkey-19e4.5	66	46.341	ENSXCOG00000004873	ptrh2	62	46.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002547	si:dkey-19e4.5	100	90.761	ENSAPOG00000018297	si:dkey-19e4.5	100	90.761	Acanthochromis_polyacanthus
ENSXCOG00000002547	si:dkey-19e4.5	95	92.000	ENSACIG00000001450	si:dkey-19e4.5	99	92.000	Amphilophus_citrinellus
ENSXCOG00000002547	si:dkey-19e4.5	100	90.761	ENSAOCG00000000622	si:dkey-19e4.5	99	93.642	Amphiprion_ocellaris
ENSXCOG00000002547	si:dkey-19e4.5	100	90.761	ENSAPEG00000017071	si:dkey-19e4.5	99	93.642	Amphiprion_percula
ENSXCOG00000002547	si:dkey-19e4.5	100	85.326	ENSATEG00000003450	si:dkey-19e4.5	100	85.326	Anabas_testudineus
ENSXCOG00000002547	si:dkey-19e4.5	62	75.439	ENSACAG00000028513	-	99	75.439	Anolis_carolinensis
ENSXCOG00000002547	si:dkey-19e4.5	100	89.674	ENSACLG00000026360	si:dkey-19e4.5	100	89.674	Astatotilapia_calliptera
ENSXCOG00000002547	si:dkey-19e4.5	100	85.326	ENSAMXG00000016302	si:dkey-19e4.5	100	85.326	Astyanax_mexicanus
ENSXCOG00000002547	si:dkey-19e4.5	92	40.000	WBGene00016062	C24G6.8	60	40.314	Caenorhabditis_elegans
ENSXCOG00000002547	si:dkey-19e4.5	100	93.478	ENSCVAG00000018623	si:dkey-19e4.5	100	93.478	Cyprinodon_variegatus
ENSXCOG00000002547	si:dkey-19e4.5	94	89.595	ENSDARG00000089886	si:dkey-19e4.5	99	89.595	Danio_rerio
ENSXCOG00000002547	si:dkey-19e4.5	100	86.631	ENSELUG00000012877	si:dkey-19e4.5	100	86.631	Esox_lucius
ENSXCOG00000002547	si:dkey-19e4.5	100	92.391	ENSFHEG00000017879	si:dkey-19e4.5	98	95.322	Fundulus_heteroclitus
ENSXCOG00000002547	si:dkey-19e4.5	73	91.045	ENSGMOG00000018615	si:dkey-19e4.5	100	91.045	Gadus_morhua
ENSXCOG00000002547	si:dkey-19e4.5	100	98.913	ENSGAFG00000008238	si:dkey-19e4.5	95	98.913	Gambusia_affinis
ENSXCOG00000002547	si:dkey-19e4.5	73	91.045	ENSGACG00000011371	si:dkey-19e4.5	100	91.045	Gasterosteus_aculeatus
ENSXCOG00000002547	si:dkey-19e4.5	100	89.674	ENSHBUG00000003898	si:dkey-19e4.5	100	89.674	Haplochromis_burtoni
ENSXCOG00000002547	si:dkey-19e4.5	100	83.243	ENSHCOG00000011175	si:dkey-19e4.5	100	83.243	Hippocampus_comes
ENSXCOG00000002547	si:dkey-19e4.5	100	84.783	ENSIPUG00000023250	si:dkey-19e4.5	100	84.783	Ictalurus_punctatus
ENSXCOG00000002547	si:dkey-19e4.5	100	85.326	ENSKMAG00000018142	si:dkey-19e4.5	100	85.326	Kryptolebias_marmoratus
ENSXCOG00000002547	si:dkey-19e4.5	100	90.217	ENSLBEG00000028494	si:dkey-19e4.5	100	90.217	Labrus_bergylta
ENSXCOG00000002547	si:dkey-19e4.5	99	67.213	ENSLACG00000003702	si:dkey-19e4.5	99	67.213	Latimeria_chalumnae
ENSXCOG00000002547	si:dkey-19e4.5	100	87.500	ENSLOCG00000013652	si:dkey-19e4.5	100	87.500	Lepisosteus_oculatus
ENSXCOG00000002547	si:dkey-19e4.5	100	88.043	ENSMAMG00000023661	si:dkey-19e4.5	99	90.857	Mastacembelus_armatus
ENSXCOG00000002547	si:dkey-19e4.5	100	89.674	ENSMZEG00005006058	si:dkey-19e4.5	99	91.379	Maylandia_zebra
ENSXCOG00000002547	si:dkey-19e4.5	100	87.500	ENSMMOG00000009678	si:dkey-19e4.5	100	87.500	Mola_mola
ENSXCOG00000002547	si:dkey-19e4.5	94	88.439	ENSMALG00000021083	si:dkey-19e4.5	99	88.439	Monopterus_albus
ENSXCOG00000002547	si:dkey-19e4.5	78	70.748	ENSNBRG00000018523	si:dkey-19e4.5	71	70.748	Neolamprologus_brichardi
ENSXCOG00000002547	si:dkey-19e4.5	100	84.239	ENSORLG00000010093	si:dkey-19e4.5	100	84.239	Oryzias_latipes
ENSXCOG00000002547	si:dkey-19e4.5	100	84.239	ENSORLG00020005940	si:dkey-19e4.5	100	84.239	Oryzias_latipes_hni
ENSXCOG00000002547	si:dkey-19e4.5	100	84.239	ENSORLG00015002105	si:dkey-19e4.5	100	84.239	Oryzias_latipes_hsok
ENSXCOG00000002547	si:dkey-19e4.5	100	84.239	ENSOMEG00000001615	si:dkey-19e4.5	99	86.705	Oryzias_melastigma
ENSXCOG00000002547	si:dkey-19e4.5	100	78.261	ENSPKIG00000016249	-	100	78.261	Paramormyrops_kingsleyae
ENSXCOG00000002547	si:dkey-19e4.5	100	86.413	ENSPKIG00000018613	-	100	86.413	Paramormyrops_kingsleyae
ENSXCOG00000002547	si:dkey-19e4.5	100	98.378	ENSPFOG00000011934	si:dkey-19e4.5	100	98.378	Poecilia_formosa
ENSXCOG00000002547	si:dkey-19e4.5	100	98.370	ENSPLAG00000012878	si:dkey-19e4.5	100	98.370	Poecilia_latipinna
ENSXCOG00000002547	si:dkey-19e4.5	100	98.378	ENSPMEG00000015916	si:dkey-19e4.5	100	98.378	Poecilia_mexicana
ENSXCOG00000002547	si:dkey-19e4.5	100	98.370	ENSPREG00000021009	si:dkey-19e4.5	100	98.370	Poecilia_reticulata
ENSXCOG00000002547	si:dkey-19e4.5	100	89.674	ENSPNYG00000007117	si:dkey-19e4.5	100	89.674	Pundamilia_nyererei
ENSXCOG00000002547	si:dkey-19e4.5	100	85.870	ENSPNAG00000009107	si:dkey-19e4.5	99	88.636	Pygocentrus_nattereri
ENSXCOG00000002547	si:dkey-19e4.5	93	84.884	ENSSFOG00015015536	-	96	84.884	Scleropages_formosus
ENSXCOG00000002547	si:dkey-19e4.5	100	87.500	ENSSFOG00015018940	-	85	87.500	Scleropages_formosus
ENSXCOG00000002547	si:dkey-19e4.5	100	90.761	ENSSMAG00000004082	si:dkey-19e4.5	100	90.761	Scophthalmus_maximus
ENSXCOG00000002547	si:dkey-19e4.5	100	90.217	ENSSDUG00000008513	si:dkey-19e4.5	100	90.217	Seriola_dumerili
ENSXCOG00000002547	si:dkey-19e4.5	93	79.651	ENSSLDG00000017403	si:dkey-19e4.5	97	79.651	Seriola_lalandi_dorsalis
ENSXCOG00000002547	si:dkey-19e4.5	69	73.228	ENSSPUG00000009492	-	81	73.228	Sphenodon_punctatus
ENSXCOG00000002547	si:dkey-19e4.5	100	91.304	ENSSPAG00000008798	si:dkey-19e4.5	98	93.642	Stegastes_partitus
ENSXCOG00000002547	si:dkey-19e4.5	100	86.413	ENSTRUG00000020025	si:dkey-19e4.5	100	86.413	Takifugu_rubripes
ENSXCOG00000002547	si:dkey-19e4.5	100	100.000	ENSXMAG00000025389	si:dkey-19e4.5	100	100.000	Xiphophorus_maculatus