EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000002556 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 15602 bases
Position: chrKQ557207.1:8214299-8229900
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	1	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	2	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	3	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	4	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	5	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	6	7
ENSXCOP00000003252	PUF	PF00806.19	5.2e-70	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003291	-	3270	-	ENSXCOP00000003252	1089 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002556	pum2	87	77.249	ENSG00000055917	PUM2	94	74.043	Homo_sapiens
ENSXCOG00000002556	pum2	87	76.860	ENSAMEG00000002823	PUM2	89	74.481	Ailuropoda_melanoleuca
ENSXCOG00000002556	pum2	91	99.389	ENSACIG00000010646	pum2	96	99.389	Amphilophus_citrinellus
ENSXCOG00000002556	pum2	98	91.429	ENSAOCG00000016619	pum2	97	91.429	Amphiprion_ocellaris
ENSXCOG00000002556	pum2	100	92.016	ENSAPEG00000019924	pum2	97	92.016	Amphiprion_percula
ENSXCOG00000002556	pum2	99	95.570	ENSATEG00000015030	pum2	97	90.351	Anabas_testudineus
ENSXCOG00000002556	pum2	100	74.134	ENSAPLG00000010496	PUM2	93	72.228	Anas_platyrhynchos
ENSXCOG00000002556	pum2	89	74.544	ENSACAG00000010491	PUM2	91	71.631	Anolis_carolinensis
ENSXCOG00000002556	pum2	87	77.663	ENSANAG00000021807	PUM2	90	74.457	Aotus_nancymaae
ENSXCOG00000002556	pum2	100	90.714	ENSACLG00000022532	pum2	97	90.714	Astatotilapia_calliptera
ENSXCOG00000002556	pum2	87	76.446	ENSBTAG00000011155	PUM2	94	74.066	Bos_taurus
ENSXCOG00000002556	pum2	87	77.456	ENSCJAG00000007450	PUM2	90	74.250	Callithrix_jacchus
ENSXCOG00000002556	pum2	87	76.446	ENSCAFG00000003839	PUM2	89	74.066	Canis_familiaris
ENSXCOG00000002556	pum2	87	76.653	ENSCAFG00020025689	PUM2	91	73.723	Canis_lupus_dingo
ENSXCOG00000002556	pum2	87	76.653	ENSCHIG00000022180	PUM2	89	74.274	Capra_hircus
ENSXCOG00000002556	pum2	87	76.343	ENSTSYG00000014463	PUM2	90	74.508	Carlito_syrichta
ENSXCOG00000002556	pum2	87	87.976	ENSCAPG00000016888	PUM2	91	85.443	Cavia_aperea
ENSXCOG00000002556	pum2	87	77.399	ENSCPOG00000031996	PUM2	89	74.277	Cavia_porcellus
ENSXCOG00000002556	pum2	87	77.456	ENSCCAG00000037035	PUM2	89	74.250	Cebus_capucinus
ENSXCOG00000002556	pum2	87	77.456	ENSCATG00000043826	PUM2	89	74.250	Cercocebus_atys
ENSXCOG00000002556	pum2	87	77.399	ENSCLAG00000006048	PUM2	89	74.277	Chinchilla_lanigera
ENSXCOG00000002556	pum2	87	77.456	ENSCSAG00000008087	PUM2	89	74.250	Chlorocebus_sabaeus
ENSXCOG00000002556	pum2	59	74.576	ENSCHOG00000004575	PUM2	69	68.606	Choloepus_hoffmanni
ENSXCOG00000002556	pum2	87	77.559	ENSCANG00000032797	PUM2	89	74.354	Colobus_angolensis_palliatus
ENSXCOG00000002556	pum2	87	77.169	ENSCGRG00001025023	Pum2	89	73.940	Cricetulus_griseus_chok1gshd
ENSXCOG00000002556	pum2	87	77.376	ENSCGRG00000001580	Pum2	89	74.147	Cricetulus_griseus_crigri
ENSXCOG00000002556	pum2	100	88.596	ENSCSEG00000020899	pum2	97	88.791	Cynoglossus_semilaevis
ENSXCOG00000002556	pum2	100	96.242	ENSCVAG00000002426	pum2	92	95.714	Cyprinodon_variegatus
ENSXCOG00000002556	pum2	100	88.321	ENSDARG00000061040	pum2	94	87.278	Danio_rerio
ENSXCOG00000002556	pum2	87	73.299	ENSDNOG00000006733	PUM2	89	70.515	Dasypus_novemcinctus
ENSXCOG00000002556	pum2	87	76.883	ENSDORG00000011453	Pum2	93	74.070	Dipodomys_ordii
ENSXCOG00000002556	pum2	79	90.426	ENSETEG00000017683	PUM2	72	90.426	Echinops_telfairi
ENSXCOG00000002556	pum2	68	61.222	ENSEBUG00000014828	pum2	92	59.199	Eptatretus_burgeri
ENSXCOG00000002556	pum2	87	60.124	ENSEBUG00000004435	pum2	90	58.299	Eptatretus_burgeri
ENSXCOG00000002556	pum2	87	76.446	ENSEASG00005009429	PUM2	89	74.066	Equus_asinus_asinus
ENSXCOG00000002556	pum2	87	76.446	ENSECAG00000021930	PUM2	94	74.066	Equus_caballus
ENSXCOG00000002556	pum2	69	65.094	ENSEEUG00000003224	-	69	62.136	Erinaceus_europaeus
ENSXCOG00000002556	pum2	99	89.121	ENSELUG00000014997	pum2	95	85.960	Esox_lucius
ENSXCOG00000002556	pum2	87	76.343	ENSFCAG00000027520	PUM2	89	73.963	Felis_catus
ENSXCOG00000002556	pum2	89	74.164	ENSFALG00000001759	PUM2	90	72.166	Ficedula_albicollis
ENSXCOG00000002556	pum2	87	76.629	ENSFDAG00000019685	PUM2	89	73.657	Fukomys_damarensis
ENSXCOG00000002556	pum2	99	97.143	ENSFHEG00000021596	pum2	92	97.143	Fundulus_heteroclitus
ENSXCOG00000002556	pum2	88	85.376	ENSGMOG00000006903	pum2	90	85.685	Gadus_morhua
ENSXCOG00000002556	pum2	89	73.834	ENSGALG00000016481	PUM2	90	71.834	Gallus_gallus
ENSXCOG00000002556	pum2	100	98.571	ENSGAFG00000013691	pum2	92	98.847	Gambusia_affinis
ENSXCOG00000002556	pum2	87	90.900	ENSGACG00000009670	pum2	95	86.197	Gasterosteus_aculeatus
ENSXCOG00000002556	pum2	100	74.468	ENSGAGG00000020698	PUM2	91	72.166	Gopherus_agassizii
ENSXCOG00000002556	pum2	87	77.353	ENSGGOG00000011374	PUM2	89	74.147	Gorilla_gorilla
ENSXCOG00000002556	pum2	100	94.538	ENSHBUG00000016453	pum2	96	88.333	Haplochromis_burtoni
ENSXCOG00000002556	pum2	87	76.112	ENSHGLG00000007892	PUM2	89	73.009	Heterocephalus_glaber_female
ENSXCOG00000002556	pum2	87	76.033	ENSHGLG00100015510	PUM2	89	73.760	Heterocephalus_glaber_male
ENSXCOG00000002556	pum2	99	92.947	ENSHCOG00000010119	pum2	97	88.813	Hippocampus_comes
ENSXCOG00000002556	pum2	87	76.939	ENSSTOG00000006262	PUM2	89	74.457	Ictidomys_tridecemlineatus
ENSXCOG00000002556	pum2	87	77.503	ENSJJAG00000020969	Pum2	89	75.129	Jaculus_jaculus
ENSXCOG00000002556	pum2	100	91.429	ENSKMAG00000017216	pum2	97	91.429	Kryptolebias_marmoratus
ENSXCOG00000002556	pum2	99	95.042	ENSLBEG00000020488	pum2	96	90.739	Labrus_bergylta
ENSXCOG00000002556	pum2	100	75.413	ENSLACG00000008723	PUM2	94	73.891	Latimeria_chalumnae
ENSXCOG00000002556	pum2	100	79.128	ENSLOCG00000017196	pum2	92	76.452	Lepisosteus_oculatus
ENSXCOG00000002556	pum2	87	76.574	ENSLAFG00000009278	PUM2	89	73.375	Loxodonta_africana
ENSXCOG00000002556	pum2	87	77.353	ENSMFAG00000000492	PUM2	89	74.147	Macaca_fascicularis
ENSXCOG00000002556	pum2	87	77.353	ENSMMUG00000023181	PUM2	89	74.147	Macaca_mulatta
ENSXCOG00000002556	pum2	87	77.353	ENSMNEG00000039659	PUM2	89	74.147	Macaca_nemestrina
ENSXCOG00000002556	pum2	87	77.456	ENSMLEG00000039243	PUM2	89	74.250	Mandrillus_leucophaeus
ENSXCOG00000002556	pum2	100	90.936	ENSMAMG00000006121	pum2	97	90.936	Mastacembelus_armatus
ENSXCOG00000002556	pum2	100	90.714	ENSMZEG00005000791	pum2	97	90.714	Maylandia_zebra
ENSXCOG00000002556	pum2	89	73.834	ENSMGAG00000014040	PUM2	90	71.834	Meleagris_gallopavo
ENSXCOG00000002556	pum2	87	77.479	ENSMAUG00000000311	Pum2	89	74.250	Mesocricetus_auratus
ENSXCOG00000002556	pum2	87	77.503	ENSMICG00000011647	PUM2	90	74.303	Microcebus_murinus
ENSXCOG00000002556	pum2	87	77.146	ENSMOCG00000013663	Pum2	89	74.404	Microtus_ochrogaster
ENSXCOG00000002556	pum2	93	86.873	ENSMMOG00000002975	pum2	95	87.536	Mola_mola
ENSXCOG00000002556	pum2	87	73.971	ENSMODG00000009811	PUM2	89	71.267	Monodelphis_domestica
ENSXCOG00000002556	pum2	87	76.780	MGP_CAROLIEiJ_G0017603	Pum2	99	76.426	Mus_caroli
ENSXCOG00000002556	pum2	87	76.677	ENSMUSG00000020594	Pum2	98	76.046	Mus_musculus
ENSXCOG00000002556	pum2	87	77.296	MGP_PahariEiJ_G0029361	Pum2	99	76.426	Mus_pahari
ENSXCOG00000002556	pum2	87	76.780	MGP_SPRETEiJ_G0018447	Pum2	99	76.046	Mus_spretus
ENSXCOG00000002556	pum2	87	76.550	ENSMPUG00000013734	PUM2	89	74.170	Mustela_putorius_furo
ENSXCOG00000002556	pum2	87	76.082	ENSMLUG00000007362	PUM2	89	73.733	Myotis_lucifugus
ENSXCOG00000002556	pum2	84	53.805	ENSNGAG00000016239	-	86	51.023	Nannospalax_galili
ENSXCOG00000002556	pum2	87	77.559	ENSNGAG00000016665	-	89	74.611	Nannospalax_galili
ENSXCOG00000002556	pum2	87	77.559	ENSNLEG00000002509	PUM2	89	74.354	Nomascus_leucogenys
ENSXCOG00000002556	pum2	81	72.317	ENSMEUG00000016567	PUM2	90	62.993	Notamacropus_eugenii
ENSXCOG00000002556	pum2	64	70.732	ENSOPRG00000001963	PUM2	79	61.905	Ochotona_princeps
ENSXCOG00000002556	pum2	87	76.780	ENSODEG00000007823	PUM2	89	74.120	Octodon_degus
ENSXCOG00000002556	pum2	100	91.429	ENSONIG00000006119	pum2	97	91.429	Oreochromis_niloticus
ENSXCOG00000002556	pum2	87	76.780	ENSOCUG00000017908	PUM2	89	73.581	Oryctolagus_cuniculus
ENSXCOG00000002556	pum2	100	87.805	ENSORLG00000012611	pum2	97	88.098	Oryzias_latipes
ENSXCOG00000002556	pum2	100	92.670	ENSORLG00020014452	pum2	92	92.984	Oryzias_latipes_hni
ENSXCOG00000002556	pum2	100	92.565	ENSORLG00015009427	pum2	92	92.880	Oryzias_latipes_hsok
ENSXCOG00000002556	pum2	87	76.289	ENSOARG00000017236	PUM2	89	73.913	Ovis_aries
ENSXCOG00000002556	pum2	87	77.353	ENSPPAG00000023095	PUM2	89	74.147	Pan_paniscus
ENSXCOG00000002556	pum2	87	76.343	ENSPPRG00000021443	PUM2	94	73.963	Panthera_pardus
ENSXCOG00000002556	pum2	87	76.343	ENSPTIG00000018982	PUM2	89	73.963	Panthera_tigris_altaica
ENSXCOG00000002556	pum2	87	77.353	ENSPTRG00000011692	PUM2	89	74.147	Pan_troglodytes
ENSXCOG00000002556	pum2	87	66.361	ENSPANG00000009393	PUM2	100	84.722	Papio_anubis
ENSXCOG00000002556	pum2	100	74.367	ENSPSIG00000011626	PUM2	92	72.470	Pelodiscus_sinensis
ENSXCOG00000002556	pum2	87	77.353	ENSPEMG00000008357	Pum2	89	74.147	Peromyscus_maniculatus_bairdii
ENSXCOG00000002556	pum2	87	62.283	ENSPMAG00000007038	pum2	89	59.082	Petromyzon_marinus
ENSXCOG00000002556	pum2	87	72.765	ENSPCIG00000022139	PUM2	90	68.882	Phascolarctos_cinereus
ENSXCOG00000002556	pum2	100	97.857	ENSPFOG00000019208	pum2	92	97.857	Poecilia_formosa
ENSXCOG00000002556	pum2	99	99.366	ENSPLAG00000001826	pum2	92	99.057	Poecilia_latipinna
ENSXCOG00000002556	pum2	100	99.082	ENSPMEG00000015766	pum2	100	99.082	Poecilia_mexicana
ENSXCOG00000002556	pum2	87	77.583	ENSPPYG00000012617	PUM2	89	74.354	Pongo_abelii
ENSXCOG00000002556	pum2	57	89.130	ENSPCAG00000008001	PUM2	58	89.130	Procavia_capensis
ENSXCOG00000002556	pum2	87	77.686	ENSPCOG00000019636	PUM2	90	74.457	Propithecus_coquereli
ENSXCOG00000002556	pum2	87	71.488	ENSPVAG00000002920	PUM2	90	69.087	Pteropus_vampyrus
ENSXCOG00000002556	pum2	100	90.272	ENSPNYG00000022901	pum2	97	90.467	Pundamilia_nyererei
ENSXCOG00000002556	pum2	97	89.468	ENSPNAG00000008025	pum2	91	88.646	Pygocentrus_nattereri
ENSXCOG00000002556	pum2	87	75.335	ENSRNOG00000006180	Pum2	89	73.375	Rattus_norvegicus
ENSXCOG00000002556	pum2	87	77.766	ENSRBIG00000044880	PUM2	94	74.354	Rhinopithecus_bieti
ENSXCOG00000002556	pum2	87	77.663	ENSSBOG00000022007	PUM2	90	74.457	Saimiri_boliviensis_boliviensis
ENSXCOG00000002556	pum2	87	73.143	ENSSHAG00000002778	PUM2	90	68.395	Sarcophilus_harrisii
ENSXCOG00000002556	pum2	100	75.355	ENSSFOG00015003476	pum2	100	74.512	Scleropages_formosus
ENSXCOG00000002556	pum2	99	93.789	ENSSMAG00000018236	pum2	97	89.300	Scophthalmus_maximus
ENSXCOG00000002556	pum2	100	95.795	ENSSDUG00000001800	pum2	100	95.795	Seriola_dumerili
ENSXCOG00000002556	pum2	100	91.626	ENSSLDG00000000981	pum2	97	91.626	Seriola_lalandi_dorsalis
ENSXCOG00000002556	pum2	83	66.710	ENSSARG00000010992	PUM2	74	65.290	Sorex_araneus
ENSXCOG00000002556	pum2	87	75.905	ENSSPUG00000017012	PUM2	90	73.423	Sphenodon_punctatus
ENSXCOG00000002556	pum2	99	96.312	ENSSPAG00000022948	pum2	97	92.143	Stegastes_partitus
ENSXCOG00000002556	pum2	87	76.319	ENSSSCG00000008600	PUM2	94	73.963	Sus_scrofa
ENSXCOG00000002556	pum2	89	74.063	ENSTGUG00000013149	PUM2	90	72.065	Taeniopygia_guttata
ENSXCOG00000002556	pum2	100	85.000	ENSTRUG00000018167	pum2	97	83.640	Takifugu_rubripes
ENSXCOG00000002556	pum2	100	87.840	ENSTNIG00000003116	pum2	97	87.549	Tetraodon_nigroviridis
ENSXCOG00000002556	pum2	73	89.117	ENSTBEG00000008729	PUM2	72	86.100	Tupaia_belangeri
ENSXCOG00000002556	pum2	87	76.033	ENSTTRG00000004887	PUM2	89	73.651	Tursiops_truncatus
ENSXCOG00000002556	pum2	70	81.572	ENSUAMG00000008120	PUM2	97	78.470	Ursus_americanus
ENSXCOG00000002556	pum2	87	76.550	ENSUMAG00000023198	PUM2	89	74.170	Ursus_maritimus
ENSXCOG00000002556	pum2	87	76.495	ENSVPAG00000005056	PUM2	89	74.120	Vicugna_pacos
ENSXCOG00000002556	pum2	87	76.550	ENSVVUG00000014829	PUM2	90	74.170	Vulpes_vulpes
ENSXCOG00000002556	pum2	100	71.577	ENSXETG00000008903	pum2	93	69.295	Xenopus_tropicalis
ENSXCOG00000002556	pum2	100	99.286	ENSXMAG00000017682	pum2	92	99.476	Xiphophorus_maculatus