EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000002678 (Gene tree)
Gene ID: -
Gene Symbol: zgc:63587
Alias: -
Full Name: zgc:63587
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 16751 bases
Position: chrKQ557204.1:19464414-19481164
Accession: ZDB-GENE-040426-1175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003398	MMR_HSR1	PF01926.23	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003436	-	1014	-	ENSXCOP00000003398	337 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000002678	zgc:63587	88	46.980	ENSXCOG00000000169	sept9a	51	46.980
ENSXCOG00000002678	zgc:63587	93	45.455	ENSXCOG00000007643	sept12	89	45.455
ENSXCOG00000002678	zgc:63587	96	63.444	ENSXCOG00000012748	SEPT4	96	63.444
ENSXCOG00000002678	zgc:63587	91	61.111	ENSXCOG00000007196	sept4a	93	62.838
ENSXCOG00000002678	zgc:63587	88	64.865	ENSXCOG00000002175	sept5a	93	68.056
ENSXCOG00000002678	zgc:63587	87	45.118	ENSXCOG00000006394	sept8a	69	45.118
ENSXCOG00000002678	zgc:63587	86	62.414	ENSXCOG00000007289	sept7b	68	62.414
ENSXCOG00000002678	zgc:63587	87	47.119	ENSXCOG00000013650	sept3	70	47.119
ENSXCOG00000002678	zgc:63587	87	44.781	ENSXCOG00000008586	sept8b	68	44.781
ENSXCOG00000002678	zgc:63587	99	74.777	ENSXCOG00000007338	sept2	98	74.777
ENSXCOG00000002678	zgc:63587	89	62.541	ENSXCOG00000016246	sept5b	86	62.541
ENSXCOG00000002678	zgc:63587	68	40.870	ENSXCOG00000016712	sept6	84	40.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002678	zgc:63587	99	97.297	ENSAPOG00000021616	zgc:63587	96	97.297	Acanthochromis_polyacanthus
ENSXCOG00000002678	zgc:63587	87	96.259	ENSACIG00000006540	zgc:63587	95	96.259	Amphilophus_citrinellus
ENSXCOG00000002678	zgc:63587	99	97.297	ENSAOCG00000015026	zgc:63587	96	97.297	Amphiprion_ocellaris
ENSXCOG00000002678	zgc:63587	99	97.297	ENSAPEG00000017625	zgc:63587	96	97.297	Amphiprion_percula
ENSXCOG00000002678	zgc:63587	99	97.006	ENSATEG00000020519	zgc:63587	96	96.697	Anabas_testudineus
ENSXCOG00000002678	zgc:63587	99	91.892	ENSACAG00000000754	-	95	91.892	Anolis_carolinensis
ENSXCOG00000002678	zgc:63587	99	96.396	ENSACLG00000011287	zgc:63587	96	96.396	Astatotilapia_calliptera
ENSXCOG00000002678	zgc:63587	98	96.049	ENSAMXG00000006164	zgc:63587	91	96.049	Astyanax_mexicanus
ENSXCOG00000002678	zgc:63587	99	92.793	ENSCPBG00000010648	-	96	93.617	Chrysemys_picta_bellii
ENSXCOG00000002678	zgc:63587	99	96.096	ENSCSEG00000019626	zgc:63587	96	96.096	Cynoglossus_semilaevis
ENSXCOG00000002678	zgc:63587	99	97.297	ENSCVAG00000017959	zgc:63587	96	97.297	Cyprinodon_variegatus
ENSXCOG00000002678	zgc:63587	70	92.857	ENSDARG00000017140	zgc:63587	86	92.857	Danio_rerio
ENSXCOG00000002678	zgc:63587	99	95.536	ENSELUG00000009060	zgc:63587	97	95.536	Esox_lucius
ENSXCOG00000002678	zgc:63587	99	92.192	ENSFALG00000008010	-	95	92.192	Ficedula_albicollis
ENSXCOG00000002678	zgc:63587	99	98.198	ENSFHEG00000018583	zgc:63587	96	98.198	Fundulus_heteroclitus
ENSXCOG00000002678	zgc:63587	98	96.657	ENSGMOG00000013563	zgc:63587	95	96.657	Gadus_morhua
ENSXCOG00000002678	zgc:63587	99	92.793	ENSGALG00000001652	SEPT2L	95	92.793	Gallus_gallus
ENSXCOG00000002678	zgc:63587	99	98.498	ENSGAFG00000000805	zgc:63587	96	98.498	Gambusia_affinis
ENSXCOG00000002678	zgc:63587	98	96.049	ENSGACG00000005552	zgc:63587	95	96.049	Gasterosteus_aculeatus
ENSXCOG00000002678	zgc:63587	99	92.793	ENSGAGG00000014380	-	95	92.793	Gopherus_agassizii
ENSXCOG00000002678	zgc:63587	99	96.396	ENSHBUG00000013996	zgc:63587	96	96.396	Haplochromis_burtoni
ENSXCOG00000002678	zgc:63587	99	96.697	ENSHCOG00000005893	zgc:63587	96	96.697	Hippocampus_comes
ENSXCOG00000002678	zgc:63587	99	96.697	ENSKMAG00000003351	zgc:63587	96	96.697	Kryptolebias_marmoratus
ENSXCOG00000002678	zgc:63587	99	96.096	ENSLBEG00000025452	zgc:63587	96	96.096	Labrus_bergylta
ENSXCOG00000002678	zgc:63587	99	87.087	ENSLACG00000015335	zgc:63587	95	87.087	Latimeria_chalumnae
ENSXCOG00000002678	zgc:63587	99	95.495	ENSLOCG00000001793	zgc:63587	95	95.495	Lepisosteus_oculatus
ENSXCOG00000002678	zgc:63587	99	96.697	ENSMAMG00000014467	zgc:63587	96	96.697	Mastacembelus_armatus
ENSXCOG00000002678	zgc:63587	99	96.396	ENSMZEG00005009713	zgc:63587	96	96.396	Maylandia_zebra
ENSXCOG00000002678	zgc:63587	99	79.279	ENSMGAG00000001294	-	95	79.279	Meleagris_gallopavo
ENSXCOG00000002678	zgc:63587	97	96.341	ENSMMOG00000011692	zgc:63587	94	96.341	Mola_mola
ENSXCOG00000002678	zgc:63587	99	89.521	ENSMODG00000010193	-	91	89.521	Monodelphis_domestica
ENSXCOG00000002678	zgc:63587	87	96.939	ENSMALG00000020157	zgc:63587	95	96.939	Monopterus_albus
ENSXCOG00000002678	zgc:63587	99	96.396	ENSNBRG00000018582	-	96	96.396	Neolamprologus_brichardi
ENSXCOG00000002678	zgc:63587	99	96.997	ENSONIG00000014408	zgc:63587	96	96.997	Oreochromis_niloticus
ENSXCOG00000002678	zgc:63587	99	96.096	ENSORLG00000002669	zgc:63587	96	96.096	Oryzias_latipes
ENSXCOG00000002678	zgc:63587	99	96.096	ENSORLG00020005356	zgc:63587	96	96.096	Oryzias_latipes_hni
ENSXCOG00000002678	zgc:63587	99	96.096	ENSORLG00015015159	zgc:63587	96	96.096	Oryzias_latipes_hsok
ENSXCOG00000002678	zgc:63587	99	96.096	ENSOMEG00000017925	zgc:63587	96	96.096	Oryzias_melastigma
ENSXCOG00000002678	zgc:63587	99	95.495	ENSPKIG00000024604	zgc:63587	94	97.403	Paramormyrops_kingsleyae
ENSXCOG00000002678	zgc:63587	99	91.892	ENSPSIG00000002946	-	95	91.892	Pelodiscus_sinensis
ENSXCOG00000002678	zgc:63587	88	93.266	ENSPMGG00000018374	zgc:63587	95	93.266	Periophthalmus_magnuspinnatus
ENSXCOG00000002678	zgc:63587	99	90.991	ENSPCIG00000025491	-	95	90.991	Phascolarctos_cinereus
ENSXCOG00000002678	zgc:63587	99	98.198	ENSPFOG00000011730	zgc:63587	96	98.198	Poecilia_formosa
ENSXCOG00000002678	zgc:63587	99	98.198	ENSPLAG00000018604	zgc:63587	96	98.198	Poecilia_latipinna
ENSXCOG00000002678	zgc:63587	99	98.498	ENSPMEG00000004117	zgc:63587	96	98.498	Poecilia_mexicana
ENSXCOG00000002678	zgc:63587	99	98.198	ENSPREG00000011612	zgc:63587	96	98.198	Poecilia_reticulata
ENSXCOG00000002678	zgc:63587	99	96.096	ENSPNYG00000008409	zgc:63587	96	96.096	Pundamilia_nyererei
ENSXCOG00000002678	zgc:63587	98	95.441	ENSPNAG00000000463	zgc:63587	86	95.031	Pygocentrus_nattereri
ENSXCOG00000002678	zgc:63587	99	90.090	ENSSHAG00000011013	-	95	90.090	Sarcophilus_harrisii
ENSXCOG00000002678	zgc:63587	99	95.495	ENSSFOG00015014108	zgc:63587	95	95.495	Scleropages_formosus
ENSXCOG00000002678	zgc:63587	99	95.833	ENSSMAG00000006113	-	97	95.833	Scophthalmus_maximus
ENSXCOG00000002678	zgc:63587	96	96.923	ENSSDUG00000002763	zgc:63587	91	96.923	Seriola_dumerili
ENSXCOG00000002678	zgc:63587	99	97.297	ENSSLDG00000004826	zgc:63587	96	97.297	Seriola_lalandi_dorsalis
ENSXCOG00000002678	zgc:63587	99	91.892	ENSSPUG00000015358	-	95	91.892	Sphenodon_punctatus
ENSXCOG00000002678	zgc:63587	59	98.485	ENSSPAG00000000807	zgc:63587	63	98.485	Stegastes_partitus
ENSXCOG00000002678	zgc:63587	99	97.297	ENSSPAG00000015654	-	96	97.297	Stegastes_partitus
ENSXCOG00000002678	zgc:63587	99	91.892	ENSTGUG00000008445	-	95	91.892	Taeniopygia_guttata
ENSXCOG00000002678	zgc:63587	99	96.096	ENSTRUG00000016492	zgc:63587	100	92.169	Takifugu_rubripes
ENSXCOG00000002678	zgc:63587	99	96.096	ENSTNIG00000015927	zgc:63587	96	96.096	Tetraodon_nigroviridis
ENSXCOG00000002678	zgc:63587	99	92.492	ENSXETG00000018605	sept2-a	95	92.492	Xenopus_tropicalis
ENSXCOG00000002678	zgc:63587	99	98.498	ENSXMAG00000014718	zgc:63587	96	98.498	Xiphophorus_maculatus