EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000002714 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7114 bases
Position: chrKQ557202.1:24114696-24121809
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	1	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	2	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	3	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	4	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	5	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	6	7
ENSXCOP00000003439	zf-C2H2	PF00096.26	2.5e-48	7	7
ENSXCOP00000003439	zf-met	PF12874.7	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003477	-	1590	-	ENSXCOP00000003439	529 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000002714	-	94	34.783	ENSXCOG00000003472	-	92	31.548
ENSXCOG00000002714	-	92	43.902	ENSXCOG00000003537	-	81	43.902
ENSXCOG00000002714	-	92	33.835	ENSXCOG00000003538	-	90	33.835
ENSXCOG00000002714	-	92	34.659	ENSXCOG00000019457	-	91	36.522
ENSXCOG00000002714	-	92	31.282	ENSXCOG00000009794	-	80	31.282
ENSXCOG00000002714	-	93	30.702	ENSXCOG00000009798	-	66	30.435
ENSXCOG00000002714	-	93	35.443	ENSXCOG00000010259	-	57	35.443
ENSXCOG00000002714	-	93	31.694	ENSXCOG00000016567	-	80	30.792
ENSXCOG00000002714	-	77	38.182	ENSXCOG00000003441	-	59	38.182
ENSXCOG00000002714	-	92	48.438	ENSXCOG00000002898	-	90	35.922
ENSXCOG00000002714	-	92	47.059	ENSXCOG00000007376	-	86	47.059
ENSXCOG00000002714	-	89	30.631	ENSXCOG00000013504	znf384l	65	30.631
ENSXCOG00000002714	-	92	35.484	ENSXCOG00000009668	-	84	35.484
ENSXCOG00000002714	-	93	31.507	ENSXCOG00000009665	-	90	31.507
ENSXCOG00000002714	-	93	30.078	ENSXCOG00000003530	-	84	30.078
ENSXCOG00000002714	-	93	36.842	ENSXCOG00000012921	-	97	36.842
ENSXCOG00000002714	-	93	35.366	ENSXCOG00000019484	-	86	46.250
ENSXCOG00000002714	-	92	32.301	ENSXCOG00000019481	-	92	39.062
ENSXCOG00000002714	-	96	55.556	ENSXCOG00000001645	si:dkey-89b17.4	98	41.237
ENSXCOG00000002714	-	92	39.024	ENSXCOG00000010576	-	75	34.884
ENSXCOG00000002714	-	94	34.884	ENSXCOG00000015441	-	97	34.884
ENSXCOG00000002714	-	93	33.012	ENSXCOG00000016860	-	78	50.000
ENSXCOG00000002714	-	92	30.678	ENSXCOG00000007987	-	75	30.678
ENSXCOG00000002714	-	93	40.517	ENSXCOG00000007981	-	96	31.655
ENSXCOG00000002714	-	97	31.790	ENSXCOG00000001292	-	86	31.790
ENSXCOG00000002714	-	92	32.512	ENSXCOG00000003499	-	68	31.944
ENSXCOG00000002714	-	91	32.927	ENSXCOG00000003493	-	82	32.927
ENSXCOG00000002714	-	92	43.902	ENSXCOG00000007406	-	98	31.358
ENSXCOG00000002714	-	92	45.122	ENSXCOG00000010488	-	57	45.122
ENSXCOG00000002714	-	81	36.607	ENSXCOG00000019675	scrt1b	56	36.607
ENSXCOG00000002714	-	92	40.244	ENSXCOG00000009772	-	86	40.244
ENSXCOG00000002714	-	92	32.373	ENSXCOG00000000354	-	71	32.373
ENSXCOG00000002714	-	92	39.130	ENSXCOG00000007529	-	97	45.161
ENSXCOG00000002714	-	92	31.135	ENSXCOG00000015312	-	94	30.685
ENSXCOG00000002714	-	74	45.652	ENSXCOG00000000254	-	68	45.652
ENSXCOG00000002714	-	92	33.333	ENSXCOG00000018253	-	99	33.333
ENSXCOG00000002714	-	94	33.772	ENSXCOG00000011725	-	87	33.772
ENSXCOG00000002714	-	93	35.965	ENSXCOG00000003468	-	80	35.965
ENSXCOG00000002714	-	93	32.432	ENSXCOG00000007396	-	87	37.234
ENSXCOG00000002714	-	93	30.894	ENSXCOG00000014363	-	68	30.894
ENSXCOG00000002714	-	92	38.889	ENSXCOG00000007957	-	96	31.803
ENSXCOG00000002714	-	97	36.885	ENSXCOG00000006951	-	68	36.885
ENSXCOG00000002714	-	92	36.232	ENSXCOG00000010948	-	71	36.232
ENSXCOG00000002714	-	94	33.566	ENSXCOG00000015947	-	99	33.566
ENSXCOG00000002714	-	79	32.653	ENSXCOG00000003438	-	66	32.653
ENSXCOG00000002714	-	93	31.902	ENSXCOG00000003435	-	88	31.902
ENSXCOG00000002714	-	93	37.349	ENSXCOG00000014361	-	59	37.349
ENSXCOG00000002714	-	83	39.091	ENSXCOG00000010422	-	50	39.091
ENSXCOG00000002714	-	82	43.902	ENSXCOG00000013213	-	58	43.902
ENSXCOG00000002714	-	93	46.269	ENSXCOG00000002473	-	97	46.269
ENSXCOG00000002714	-	92	38.281	ENSXCOG00000008083	-	95	33.663
ENSXCOG00000002714	-	64	43.519	ENSXCOG00000015084	snai2	64	43.519
ENSXCOG00000002714	-	98	30.241	ENSXCOG00000013004	-	78	31.008
ENSXCOG00000002714	-	92	30.744	ENSXCOG00000019492	-	96	30.744
ENSXCOG00000002714	-	75	41.600	ENSXCOG00000008003	-	66	41.600
ENSXCOG00000002714	-	92	30.000	ENSXCOG00000019149	znf526	85	32.692
ENSXCOG00000002714	-	93	43.902	ENSXCOG00000007994	-	91	41.441
ENSXCOG00000002714	-	95	30.172	ENSXCOG00000009597	ZNF319	85	30.172
ENSXCOG00000002714	-	92	34.286	ENSXCOG00000007076	-	100	32.335
ENSXCOG00000002714	-	92	34.071	ENSXCOG00000007139	-	82	30.469
ENSXCOG00000002714	-	97	42.991	ENSXCOG00000001200	-	90	42.982
ENSXCOG00000002714	-	95	37.333	ENSXCOG00000003484	-	69	37.333
ENSXCOG00000002714	-	92	42.520	ENSXCOG00000002857	-	96	41.333
ENSXCOG00000002714	-	92	41.667	ENSXCOG00000019443	-	98	36.905
ENSXCOG00000002714	-	92	34.343	ENSXCOG00000017871	zgc:113343	69	34.343
ENSXCOG00000002714	-	92	42.593	ENSXCOG00000009781	-	61	42.593
ENSXCOG00000002714	-	93	42.169	ENSXCOG00000009997	-	64	32.653
ENSXCOG00000002714	-	92	30.818	ENSXCOG00000009992	zbtb47b	84	30.818
ENSXCOG00000002714	-	92	42.202	ENSXCOG00000002512	-	75	42.202
ENSXCOG00000002714	-	92	39.474	ENSXCOG00000007941	-	85	39.474
ENSXCOG00000002714	-	92	35.714	ENSXCOG00000007945	-	89	30.769
ENSXCOG00000002714	-	92	35.032	ENSXCOG00000000528	-	98	35.032
ENSXCOG00000002714	-	96	32.075	ENSXCOG00000013870	-	73	32.075
ENSXCOG00000002714	-	92	36.885	ENSXCOG00000003451	-	96	32.700
ENSXCOG00000002714	-	93	31.957	ENSXCOG00000007368	-	95	31.957
ENSXCOG00000002714	-	53	40.506	ENSXCOG00000018615	-	85	40.506
ENSXCOG00000002714	-	93	40.323	ENSXCOG00000013066	-	87	40.323
ENSXCOG00000002714	-	68	35.714	ENSXCOG00000020769	-	88	35.714
ENSXCOG00000002714	-	83	31.655	ENSXCOG00000020768	-	86	31.655
ENSXCOG00000002714	-	93	40.984	ENSXCOG00000001116	-	87	40.984
ENSXCOG00000002714	-	92	53.488	ENSXCOG00000008062	-	99	53.488
ENSXCOG00000002714	-	92	40.476	ENSXCOG00000009003	-	76	30.303
ENSXCOG00000002714	-	86	35.000	ENSXCOG00000019861	-	59	35.000
ENSXCOG00000002714	-	92	32.995	ENSXCOG00000008978	-	94	30.631
ENSXCOG00000002714	-	92	32.317	ENSXCOG00000007979	-	84	32.292
ENSXCOG00000002714	-	92	31.672	ENSXCOG00000006614	-	98	35.294
ENSXCOG00000002714	-	92	44.262	ENSXCOG00000019377	-	93	44.262
ENSXCOG00000002714	-	93	38.710	ENSXCOG00000010567	-	98	38.793
ENSXCOG00000002714	-	90	48.235	ENSXCOG00000009777	-	50	48.235
ENSXCOG00000002714	-	81	36.842	ENSXCOG00000013306	-	59	36.842
ENSXCOG00000002714	-	92	32.669	ENSXCOG00000008116	-	97	32.669
ENSXCOG00000002714	-	93	34.024	ENSXCOG00000001226	-	95	30.723
ENSXCOG00000002714	-	73	45.283	ENSXCOG00000018315	-	92	45.283
ENSXCOG00000002714	-	92	42.017	ENSXCOG00000006553	-	85	42.017
ENSXCOG00000002714	-	53	48.101	ENSXCOG00000017528	snai1a	51	48.101
ENSXCOG00000002714	-	93	44.643	ENSXCOG00000007413	-	59	44.643
ENSXCOG00000002714	-	93	32.447	ENSXCOG00000007414	-	91	30.324
ENSXCOG00000002714	-	92	30.579	ENSXCOG00000016117	-	98	30.606
ENSXCOG00000002714	-	93	34.409	ENSXCOG00000016307	-	86	31.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002714	-	93	44.601	ENSAPOG00000020151	znf646	98	43.268	Acanthochromis_polyacanthus
ENSXCOG00000002714	-	96	53.968	ENSAPOG00000018015	si:dkey-89b17.4	97	38.147	Acanthochromis_polyacanthus
ENSXCOG00000002714	-	95	48.406	ENSACIG00000023049	znf646	96	48.406	Amphilophus_citrinellus
ENSXCOG00000002714	-	94	41.237	ENSACIG00000001025	si:dkey-89b17.4	98	38.147	Amphilophus_citrinellus
ENSXCOG00000002714	-	96	53.968	ENSAOCG00000018684	si:dkey-89b17.4	97	38.147	Amphiprion_ocellaris
ENSXCOG00000002714	-	93	50.395	ENSAOCG00000012062	znf646	98	43.419	Amphiprion_ocellaris
ENSXCOG00000002714	-	96	53.968	ENSAPEG00000007719	si:dkey-89b17.4	97	38.147	Amphiprion_percula
ENSXCOG00000002714	-	93	50.395	ENSAPEG00000006427	znf646	98	42.744	Amphiprion_percula
ENSXCOG00000002714	-	95	38.268	ENSATEG00000016814	si:dkey-89b17.4	97	38.827	Anabas_testudineus
ENSXCOG00000002714	-	96	46.203	ENSATEG00000015206	znf646	98	44.355	Anabas_testudineus
ENSXCOG00000002714	-	96	37.602	ENSACLG00000016017	si:dkey-89b17.4	97	38.147	Astatotilapia_calliptera
ENSXCOG00000002714	-	96	43.185	ENSACLG00000012712	znf646	93	42.638	Astatotilapia_calliptera
ENSXCOG00000002714	-	92	46.377	ENSAMXG00000001155	si:dkey-89b17.4	93	39.612	Astyanax_mexicanus
ENSXCOG00000002714	-	97	36.061	ENSAMXG00000035525	znf646	97	36.419	Astyanax_mexicanus
ENSXCOG00000002714	-	94	39.130	ENSCSEG00000010769	si:dkey-89b17.4	96	35.429	Cynoglossus_semilaevis
ENSXCOG00000002714	-	96	43.228	ENSCSEG00000012389	znf646	91	44.936	Cynoglossus_semilaevis
ENSXCOG00000002714	-	94	41.237	ENSCVAG00000012420	si:dkey-89b17.4	96	41.237	Cyprinodon_variegatus
ENSXCOG00000002714	-	95	51.765	ENSDARG00000061424	znf646	99	53.012	Danio_rerio
ENSXCOG00000002714	-	96	50.000	ENSDARG00000075545	si:dkey-89b17.4	90	50.000	Danio_rerio
ENSXCOG00000002714	-	98	40.593	ENSELUG00000010423	znf646	98	44.749	Esox_lucius
ENSXCOG00000002714	-	95	42.023	ENSELUG00000015516	si:dkey-89b17.4	97	42.023	Esox_lucius
ENSXCOG00000002714	-	97	56.545	ENSFHEG00000000561	znf646	98	56.326	Fundulus_heteroclitus
ENSXCOG00000002714	-	94	41.237	ENSFHEG00000019457	si:dkey-89b17.4	97	38.147	Fundulus_heteroclitus
ENSXCOG00000002714	-	96	56.859	ENSGMOG00000016554	znf646	99	56.859	Gadus_morhua
ENSXCOG00000002714	-	94	41.237	ENSGAFG00000000345	si:dkey-89b17.4	97	41.237	Gambusia_affinis
ENSXCOG00000002714	-	95	92.381	ENSGAFG00000016353	-	90	92.381	Gambusia_affinis
ENSXCOG00000002714	-	96	57.143	ENSGACG00000008733	znf646	81	57.143	Gasterosteus_aculeatus
ENSXCOG00000002714	-	96	41.330	ENSGACG00000014714	si:dkey-89b17.4	99	35.043	Gasterosteus_aculeatus
ENSXCOG00000002714	-	96	43.956	ENSHBUG00000004840	znf646	99	43.956	Haplochromis_burtoni
ENSXCOG00000002714	-	96	37.602	ENSHBUG00000013093	si:dkey-89b17.4	97	38.147	Haplochromis_burtoni
ENSXCOG00000002714	-	94	41.308	ENSHCOG00000001901	si:dkey-89b17.4	97	37.867	Hippocampus_comes
ENSXCOG00000002714	-	95	55.952	ENSHCOG00000014890	znf646	97	55.952	Hippocampus_comes
ENSXCOG00000002714	-	95	39.720	ENSIPUG00000018102	znf646	97	37.178	Ictalurus_punctatus
ENSXCOG00000002714	-	93	39.503	ENSIPUG00000012845	si:dkey-89b17.4	86	39.344	Ictalurus_punctatus
ENSXCOG00000002714	-	91	62.406	ENSIPUG00000012830	-	83	61.654	Ictalurus_punctatus
ENSXCOG00000002714	-	94	55.229	ENSKMAG00000011982	znf646	98	55.229	Kryptolebias_marmoratus
ENSXCOG00000002714	-	96	37.875	ENSKMAG00000014037	si:dkey-89b17.4	97	37.875	Kryptolebias_marmoratus
ENSXCOG00000002714	-	96	41.237	ENSLBEG00000020291	si:dkey-89b17.4	97	38.420	Labrus_bergylta
ENSXCOG00000002714	-	99	43.548	ENSLBEG00000016562	znf646	99	43.548	Labrus_bergylta
ENSXCOG00000002714	-	95	31.985	ENSLOCG00000003238	si:dkey-89b17.4	100	32.353	Lepisosteus_oculatus
ENSXCOG00000002714	-	93	46.372	ENSMAMG00000009313	znf646	87	43.548	Mastacembelus_armatus
ENSXCOG00000002714	-	96	37.330	ENSMAMG00000009604	si:dkey-89b17.4	97	37.875	Mastacembelus_armatus
ENSXCOG00000002714	-	96	37.602	ENSMZEG00005003901	si:dkey-89b17.4	97	38.147	Maylandia_zebra
ENSXCOG00000002714	-	93	47.632	ENSMZEG00005011264	znf646	93	47.632	Maylandia_zebra
ENSXCOG00000002714	-	96	49.258	ENSMMOG00000002311	znf646	98	49.258	Mola_mola
ENSXCOG00000002714	-	96	53.968	ENSMMOG00000012741	si:dkey-89b17.4	99	41.237	Mola_mola
ENSXCOG00000002714	-	93	44.762	ENSMALG00000002274	-	99	34.043	Monopterus_albus
ENSXCOG00000002714	-	96	50.000	ENSMALG00000019558	si:dkey-89b17.4	97	38.147	Monopterus_albus
ENSXCOG00000002714	-	96	34.940	ENSNBRG00000020314	si:dkey-89b17.4	99	32.782	Neolamprologus_brichardi
ENSXCOG00000002714	-	96	43.032	ENSNBRG00000022534	znf646	93	42.485	Neolamprologus_brichardi
ENSXCOG00000002714	-	93	44.592	ENSONIG00000019947	-	100	44.592	Oreochromis_niloticus
ENSXCOG00000002714	-	96	45.422	ENSONIG00000009324	si:dkey-89b17.4	99	45.422	Oreochromis_niloticus
ENSXCOG00000002714	-	94	42.768	ENSORLG00000007885	znf646	97	42.146	Oryzias_latipes
ENSXCOG00000002714	-	96	55.556	ENSORLG00000024255	si:dkey-89b17.4	98	36.620	Oryzias_latipes
ENSXCOG00000002714	-	94	42.768	ENSORLG00020010285	znf646	97	42.146	Oryzias_latipes_hni
ENSXCOG00000002714	-	97	42.613	ENSORLG00015008733	znf646	97	48.352	Oryzias_latipes_hsok
ENSXCOG00000002714	-	96	46.591	ENSOMEG00000015658	znf646	99	46.591	Oryzias_melastigma
ENSXCOG00000002714	-	96	40.376	ENSOMEG00000020587	si:dkey-89b17.4	98	40.845	Oryzias_melastigma
ENSXCOG00000002714	-	96	52.919	ENSPMGG00000004639	znf646	98	52.919	Periophthalmus_magnuspinnatus
ENSXCOG00000002714	-	96	37.883	ENSPMGG00000015931	-	90	37.883	Periophthalmus_magnuspinnatus
ENSXCOG00000002714	-	94	41.237	ENSPFOG00000008241	si:dkey-89b17.4	97	41.237	Poecilia_formosa
ENSXCOG00000002714	-	96	52.610	ENSPFOG00000004826	-	100	58.924	Poecilia_formosa
ENSXCOG00000002714	-	94	41.237	ENSPLAG00000011382	si:dkey-89b17.4	97	41.237	Poecilia_latipinna
ENSXCOG00000002714	-	96	92.089	ENSPLAG00000010454	-	99	92.121	Poecilia_latipinna
ENSXCOG00000002714	-	94	41.237	ENSPMEG00000000141	si:dkey-89b17.4	97	41.237	Poecilia_mexicana
ENSXCOG00000002714	-	96	92.292	ENSPMEG00000018283	znf646	98	92.292	Poecilia_mexicana
ENSXCOG00000002714	-	98	93.929	ENSPREG00000017637	znf646	97	93.929	Poecilia_reticulata
ENSXCOG00000002714	-	96	41.237	ENSPREG00000012579	si:dkey-89b17.4	97	41.237	Poecilia_reticulata
ENSXCOG00000002714	-	96	37.602	ENSPNYG00000011901	si:dkey-89b17.4	97	38.147	Pundamilia_nyererei
ENSXCOG00000002714	-	96	43.338	ENSPNYG00000017692	znf646	93	42.791	Pundamilia_nyererei
ENSXCOG00000002714	-	92	52.542	ENSPNAG00000022072	si:dkey-89b17.4	97	39.286	Pygocentrus_nattereri
ENSXCOG00000002714	-	96	37.065	ENSPNAG00000000750	znf646	97	54.118	Pygocentrus_nattereri
ENSXCOG00000002714	-	98	41.045	ENSSFOG00015004737	si:dkey-89b17.4	98	41.120	Scleropages_formosus
ENSXCOG00000002714	-	94	44.094	ENSSMAG00000012378	znf646	92	42.677	Scophthalmus_maximus
ENSXCOG00000002714	-	95	37.602	ENSSDUG00000015931	si:dkey-89b17.4	97	38.147	Seriola_dumerili
ENSXCOG00000002714	-	95	46.772	ENSSDUG00000002675	znf646	98	43.396	Seriola_dumerili
ENSXCOG00000002714	-	96	42.742	ENSSLDG00000018521	znf646	98	43.396	Seriola_lalandi_dorsalis
ENSXCOG00000002714	-	95	37.602	ENSSLDG00000012415	si:dkey-89b17.4	97	38.147	Seriola_lalandi_dorsalis
ENSXCOG00000002714	-	94	46.130	ENSSPAG00000016701	znf646	98	42.902	Stegastes_partitus
ENSXCOG00000002714	-	96	41.237	ENSSPAG00000018810	si:dkey-89b17.4	97	38.147	Stegastes_partitus
ENSXCOG00000002714	-	94	50.000	ENSTRUG00000025597	znf646	99	50.000	Takifugu_rubripes
ENSXCOG00000002714	-	96	56.897	ENSTRUG00000020495	si:dkey-89b17.4	96	56.897	Takifugu_rubripes
ENSXCOG00000002714	-	96	51.556	ENSTNIG00000000073	znf646	97	51.556	Tetraodon_nigroviridis
ENSXCOG00000002714	-	96	42.355	ENSTNIG00000001159	si:dkey-89b17.4	99	42.355	Tetraodon_nigroviridis
ENSXCOG00000002714	-	100	97.353	ENSXMAG00000018743	-	100	97.353	Xiphophorus_maculatus
ENSXCOG00000002714	-	96	41.237	ENSXMAG00000024528	si:dkey-89b17.4	98	41.237	Xiphophorus_maculatus