EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000002813 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5758 bases
Position: chrKQ557201.1:7318435-7324192
Accession: ZDB-GENE-060503-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003566	B3_4	PF03483.17	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003605	-	1674	-	ENSXCOP00000003566	557 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002813	lrrc47	98	54.957	ENSG00000130764	LRRC47	98	55.478	Homo_sapiens
ENSXCOG00000002813	lrrc47	98	80.470	ENSAPOG00000019553	lrrc47	99	80.651	Acanthochromis_polyacanthus
ENSXCOG00000002813	lrrc47	75	57.275	ENSAMEG00000009152	LRRC47	94	57.968	Ailuropoda_melanoleuca
ENSXCOG00000002813	lrrc47	67	61.905	ENSAPLG00000003167	LRRC47	99	62.534	Anas_platyrhynchos
ENSXCOG00000002813	lrrc47	66	61.126	ENSACAG00000008267	LRRC47	100	61.126	Anolis_carolinensis
ENSXCOG00000002813	lrrc47	98	54.435	ENSANAG00000025576	LRRC47	98	54.957	Aotus_nancymaae
ENSXCOG00000002813	lrrc47	98	55.166	ENSBTAG00000004738	LRRC47	98	55.166	Bos_taurus
ENSXCOG00000002813	lrrc47	95	55.054	ENSCAFG00000019492	LRRC47	97	55.245	Canis_familiaris
ENSXCOG00000002813	lrrc47	98	55.401	ENSCAFG00020009667	LRRC47	99	55.401	Canis_lupus_dingo
ENSXCOG00000002813	lrrc47	98	55.867	ENSCHIG00000022607	LRRC47	98	56.042	Capra_hircus
ENSXCOG00000002813	lrrc47	95	55.315	ENSTSYG00000009326	LRRC47	97	55.203	Carlito_syrichta
ENSXCOG00000002813	lrrc47	65	60.160	ENSCAPG00000016517	LRRC47	99	59.200	Cavia_aperea
ENSXCOG00000002813	lrrc47	98	54.545	ENSCPOG00000014931	LRRC47	95	54.021	Cavia_porcellus
ENSXCOG00000002813	lrrc47	98	54.087	ENSCCAG00000024895	LRRC47	98	54.609	Cebus_capucinus
ENSXCOG00000002813	lrrc47	98	55.130	ENSCATG00000029337	LRRC47	98	56.000	Cercocebus_atys
ENSXCOG00000002813	lrrc47	98	54.482	ENSCLAG00000006093	LRRC47	98	54.657	Chinchilla_lanigera
ENSXCOG00000002813	lrrc47	98	55.304	ENSCSAG00000000727	LRRC47	98	56.174	Chlorocebus_sabaeus
ENSXCOG00000002813	lrrc47	98	51.338	ENSCPBG00000019404	LRRC47	98	51.338	Chrysemys_picta_bellii
ENSXCOG00000002813	lrrc47	79	56.209	ENSCANG00000030701	LRRC47	96	57.298	Colobus_angolensis_palliatus
ENSXCOG00000002813	lrrc47	98	54.833	ENSCGRG00001015159	Lrrc47	89	54.833	Cricetulus_griseus_chok1gshd
ENSXCOG00000002813	lrrc47	66	60.372	ENSCGRG00000017336	Lrrc47	99	60.590	Cricetulus_griseus_crigri
ENSXCOG00000002813	lrrc47	99	74.368	ENSCSEG00000006217	lrrc47	96	74.640	Cynoglossus_semilaevis
ENSXCOG00000002813	lrrc47	65	59.055	ENSDORG00000016594	Lrrc47	99	60.372	Dipodomys_ordii
ENSXCOG00000002813	lrrc47	98	55.672	ENSEASG00005021788	LRRC47	98	55.672	Equus_asinus_asinus
ENSXCOG00000002813	lrrc47	98	56.021	ENSECAG00000022472	LRRC47	89	56.021	Equus_caballus
ENSXCOG00000002813	lrrc47	98	67.558	ENSELUG00000017544	lrrc47	97	67.914	Esox_lucius
ENSXCOG00000002813	lrrc47	93	54.144	ENSFCAG00000011632	LRRC47	96	53.552	Felis_catus
ENSXCOG00000002813	lrrc47	70	61.697	ENSFALG00000009631	LRRC47	98	57.895	Ficedula_albicollis
ENSXCOG00000002813	lrrc47	99	63.958	ENSGMOG00000015674	lrrc47	99	64.184	Gadus_morhua
ENSXCOG00000002813	lrrc47	98	51.773	ENSGALG00000050995	LRRC47	99	51.384	Gallus_gallus
ENSXCOG00000002813	lrrc47	98	73.056	ENSGACG00000005550	lrrc47	98	73.418	Gasterosteus_aculeatus
ENSXCOG00000002813	lrrc47	98	51.695	ENSGAGG00000022584	LRRC47	98	52.881	Gopherus_agassizii
ENSXCOG00000002813	lrrc47	98	55.130	ENSGGOG00000015571	LRRC47	98	55.652	Gorilla_gorilla
ENSXCOG00000002813	lrrc47	98	53.322	ENSHGLG00000018278	LRRC47	95	53.322	Heterocephalus_glaber_female
ENSXCOG00000002813	lrrc47	70	58.354	ENSHGLG00100008507	LRRC47	99	58.105	Heterocephalus_glaber_male
ENSXCOG00000002813	lrrc47	98	75.046	ENSHCOG00000006348	lrrc47	97	74.909	Hippocampus_comes
ENSXCOG00000002813	lrrc47	98	55.458	ENSSTOG00000027559	LRRC47	98	55.035	Ictidomys_tridecemlineatus
ENSXCOG00000002813	lrrc47	98	56.119	ENSJJAG00000017474	Lrrc47	95	56.119	Jaculus_jaculus
ENSXCOG00000002813	lrrc47	98	79.566	ENSKMAG00000003414	lrrc47	99	81.013	Kryptolebias_marmoratus
ENSXCOG00000002813	lrrc47	98	56.446	ENSLAFG00000011657	LRRC47	98	56.866	Loxodonta_africana
ENSXCOG00000002813	lrrc47	98	43.750	ENSMFAG00000045730	LRRC47	88	55.696	Macaca_fascicularis
ENSXCOG00000002813	lrrc47	98	55.190	ENSMNEG00000042488	LRRC47	98	56.000	Macaca_nemestrina
ENSXCOG00000002813	lrrc47	77	56.473	ENSMLEG00000043735	LRRC47	90	57.589	Mandrillus_leucophaeus
ENSXCOG00000002813	lrrc47	98	55.360	ENSMAUG00000021337	Lrrc47	97	55.360	Mesocricetus_auratus
ENSXCOG00000002813	lrrc47	98	55.226	ENSMICG00000026816	LRRC47	98	55.923	Microcebus_murinus
ENSXCOG00000002813	lrrc47	98	55.595	ENSMOCG00000021279	Lrrc47	98	55.595	Microtus_ochrogaster
ENSXCOG00000002813	lrrc47	98	77.215	ENSMMOG00000017007	lrrc47	99	76.673	Mola_mola
ENSXCOG00000002813	lrrc47	98	54.145	ENSMODG00000006554	LRRC47	98	54.482	Monodelphis_domestica
ENSXCOG00000002813	lrrc47	98	55.088	MGP_CAROLIEiJ_G0026864	Lrrc47	98	55.088	Mus_caroli
ENSXCOG00000002813	lrrc47	98	55.088	ENSMUSG00000029028	Lrrc47	98	55.088	Mus_musculus
ENSXCOG00000002813	lrrc47	96	56.071	MGP_PahariEiJ_G0029212	Lrrc47	96	55.893	Mus_pahari
ENSXCOG00000002813	lrrc47	98	54.912	MGP_SPRETEiJ_G0027857	Lrrc47	98	54.912	Mus_spretus
ENSXCOG00000002813	lrrc47	65	59.947	ENSMPUG00000007321	LRRC47	75	60.477	Mustela_putorius_furo
ENSXCOG00000002813	lrrc47	98	55.203	ENSNGAG00000022153	Lrrc47	98	55.634	Nannospalax_galili
ENSXCOG00000002813	lrrc47	98	54.101	ENSNLEG00000008131	LRRC47	98	54.087	Nomascus_leucogenys
ENSXCOG00000002813	lrrc47	83	54.938	ENSODEG00000010882	LRRC47	93	55.144	Octodon_degus
ENSXCOG00000002813	lrrc47	95	75.655	ENSORLG00000002532	lrrc47	99	77.341	Oryzias_latipes
ENSXCOG00000002813	lrrc47	98	76.311	ENSORLG00020019601	lrrc47	99	77.939	Oryzias_latipes_hni
ENSXCOG00000002813	lrrc47	98	75.588	ENSORLG00015014040	lrrc47	99	77.215	Oryzias_latipes_hsok
ENSXCOG00000002813	lrrc47	98	78.300	ENSOMEG00000008989	lrrc47	99	78.843	Oryzias_melastigma
ENSXCOG00000002813	lrrc47	98	55.052	ENSOGAG00000001553	LRRC47	98	55.052	Otolemur_garnettii
ENSXCOG00000002813	lrrc47	98	53.765	ENSOARG00000015290	LRRC47	98	53.940	Ovis_aries
ENSXCOG00000002813	lrrc47	74	58.879	ENSPPAG00000036370	-	98	59.579	Pan_paniscus
ENSXCOG00000002813	lrrc47	98	53.633	ENSPPRG00000005261	LRRC47	98	54.974	Panthera_pardus
ENSXCOG00000002813	lrrc47	98	54.957	ENSPTRG00000000068	LRRC47	98	55.478	Pan_troglodytes
ENSXCOG00000002813	lrrc47	98	55.304	ENSPANG00000012437	LRRC47	98	56.174	Papio_anubis
ENSXCOG00000002813	lrrc47	65	62.599	ENSPSIG00000004196	LRRC47	99	62.865	Pelodiscus_sinensis
ENSXCOG00000002813	lrrc47	65	61.559	ENSPEMG00000021068	Lrrc47	99	61.662	Peromyscus_maniculatus_bairdii
ENSXCOG00000002813	lrrc47	98	56.415	ENSPCIG00000003638	LRRC47	98	56.098	Phascolarctos_cinereus
ENSXCOG00000002813	lrrc47	93	95.393	ENSPFOG00000000992	lrrc47	94	95.777	Poecilia_formosa
ENSXCOG00000002813	lrrc47	99	95.290	ENSPLAG00000008077	lrrc47	99	95.652	Poecilia_latipinna
ENSXCOG00000002813	lrrc47	99	94.946	ENSPMEG00000007367	lrrc47	99	95.307	Poecilia_mexicana
ENSXCOG00000002813	lrrc47	98	54.957	ENSPPYG00000001960	LRRC47	98	55.478	Pongo_abelii
ENSXCOG00000002813	lrrc47	98	55.401	ENSPCOG00000019161	LRRC47	98	55.923	Propithecus_coquereli
ENSXCOG00000002813	lrrc47	98	55.536	ENSPVAG00000009839	LRRC47	98	55.536	Pteropus_vampyrus
ENSXCOG00000002813	lrrc47	99	65.009	ENSPNAG00000017982	lrrc47	99	65.009	Pygocentrus_nattereri
ENSXCOG00000002813	lrrc47	98	54.912	ENSRNOG00000024796	Lrrc47	98	54.912	Rattus_norvegicus
ENSXCOG00000002813	lrrc47	98	55.304	ENSRBIG00000019437	LRRC47	98	56.174	Rhinopithecus_bieti
ENSXCOG00000002813	lrrc47	98	55.304	ENSRROG00000043182	LRRC47	98	56.174	Rhinopithecus_roxellana
ENSXCOG00000002813	lrrc47	78	57.174	ENSSBOG00000026334	LRRC47	92	57.837	Saimiri_boliviensis_boliviensis
ENSXCOG00000002813	lrrc47	98	50.435	ENSSHAG00000007360	LRRC47	99	50.344	Sarcophilus_harrisii
ENSXCOG00000002813	lrrc47	98	78.159	ENSSMAG00000009344	lrrc47	99	77.639	Scophthalmus_maximus
ENSXCOG00000002813	lrrc47	99	79.211	ENSSDUG00000014618	lrrc47	99	80.108	Seriola_dumerili
ENSXCOG00000002813	lrrc47	99	78.853	ENSSLDG00000018908	lrrc47	99	79.749	Seriola_lalandi_dorsalis
ENSXCOG00000002813	lrrc47	98	51.813	ENSSPUG00000010277	LRRC47	98	52.332	Sphenodon_punctatus
ENSXCOG00000002813	lrrc47	98	80.651	ENSSPAG00000005188	lrrc47	99	80.396	Stegastes_partitus
ENSXCOG00000002813	lrrc47	98	55.166	ENSSSCG00000039516	LRRC47	98	55.517	Sus_scrofa
ENSXCOG00000002813	lrrc47	71	60.453	ENSTGUG00000002737	LRRC47	99	60.453	Taeniopygia_guttata
ENSXCOG00000002813	lrrc47	98	76.417	ENSTRUG00000017696	lrrc47	99	76.417	Takifugu_rubripes
ENSXCOG00000002813	lrrc47	99	75.226	ENSTNIG00000010923	lrrc47	99	75.407	Tetraodon_nigroviridis
ENSXCOG00000002813	lrrc47	98	54.181	ENSTTRG00000011751	LRRC47	98	54.355	Tursiops_truncatus
ENSXCOG00000002813	lrrc47	89	55.019	ENSUAMG00000012080	LRRC47	98	55.598	Ursus_americanus
ENSXCOG00000002813	lrrc47	66	59.737	ENSUMAG00000010781	LRRC47	81	60.526	Ursus_maritimus
ENSXCOG00000002813	lrrc47	94	52.727	ENSVVUG00000027118	LRRC47	93	52.909	Vulpes_vulpes
ENSXCOG00000002813	lrrc47	98	58.259	ENSXETG00000006029	lrrc47	98	58.792	Xenopus_tropicalis
ENSXCOG00000002813	lrrc47	98	98.905	ENSXMAG00000019386	lrrc47	99	98.905	Xiphophorus_maculatus