EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000002848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 14688 bases
Position: chrKQ557201.1:7724919-7739606
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003612	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003651	-	4047	-	ENSXCOP00000003612	1348 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000002848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000002848	-	98	59.111	ENSXCOG00000004961	rad54l2	93	58.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000002848	-	94	59.763	ENSG00000164080	RAD54L2	98	59.174	Homo_sapiens
ENSXCOG00000002848	-	99	76.031	ENSAPOG00000024141	-	97	75.944	Acanthochromis_polyacanthus
ENSXCOG00000002848	-	94	59.911	ENSAMEG00000009326	RAD54L2	91	59.455	Ailuropoda_melanoleuca
ENSXCOG00000002848	-	93	76.249	ENSACIG00000015932	-	100	75.534	Amphilophus_citrinellus
ENSXCOG00000002848	-	88	63.521	ENSACIG00000018079	rad54l2	93	61.310	Amphilophus_citrinellus
ENSXCOG00000002848	-	99	75.506	ENSAOCG00000022380	-	95	75.373	Amphiprion_ocellaris
ENSXCOG00000002848	-	99	75.017	ENSATEG00000006641	-	95	74.805	Anabas_testudineus
ENSXCOG00000002848	-	99	60.649	ENSATEG00000009346	rad54l2	95	61.825	Anabas_testudineus
ENSXCOG00000002848	-	98	61.500	ENSAPLG00000002121	RAD54L2	94	61.926	Anas_platyrhynchos
ENSXCOG00000002848	-	84	66.106	ENSACAG00000015883	RAD54L2	89	66.106	Anolis_carolinensis
ENSXCOG00000002848	-	94	59.541	ENSANAG00000025396	RAD54L2	91	59.308	Aotus_nancymaae
ENSXCOG00000002848	-	99	75.035	ENSACLG00000018296	-	96	74.983	Astatotilapia_calliptera
ENSXCOG00000002848	-	98	59.972	ENSACLG00000019111	rad54l2	93	61.052	Astatotilapia_calliptera
ENSXCOG00000002848	-	98	60.771	ENSAMXG00000013807	rad54l2	91	60.176	Astyanax_mexicanus
ENSXCOG00000002848	-	95	59.763	ENSBTAG00000032253	RAD54L2	93	59.455	Bos_taurus
ENSXCOG00000002848	-	51	46.853	WBGene00007761	rad-26	56	46.977	Caenorhabditis_elegans
ENSXCOG00000002848	-	94	59.941	ENSCJAG00000005575	RAD54L2	91	59.706	Callithrix_jacchus
ENSXCOG00000002848	-	95	59.617	ENSCAFG00000010120	RAD54L2	91	59.308	Canis_familiaris
ENSXCOG00000002848	-	95	59.617	ENSCAFG00020022320	RAD54L2	91	59.308	Canis_lupus_dingo
ENSXCOG00000002848	-	94	60.089	ENSCHIG00000008830	RAD54L2	93	58.590	Capra_hircus
ENSXCOG00000002848	-	94	59.867	ENSTSYG00000013200	RAD54L2	91	59.265	Carlito_syrichta
ENSXCOG00000002848	-	84	64.369	ENSCAPG00000016465	RAD54L2	88	64.791	Cavia_aperea
ENSXCOG00000002848	-	94	59.779	ENSCPOG00000005941	RAD54L2	91	59.545	Cavia_porcellus
ENSXCOG00000002848	-	84	60.506	ENSCCAG00000024465	RAD54L2	90	60.235	Cebus_capucinus
ENSXCOG00000002848	-	94	60.015	ENSCATG00000039891	RAD54L2	92	59.779	Cercocebus_atys
ENSXCOG00000002848	-	94	59.585	ENSCLAG00000008059	RAD54L2	91	59.585	Chinchilla_lanigera
ENSXCOG00000002848	-	94	59.985	ENSCSAG00000014027	RAD54L2	91	59.750	Chlorocebus_sabaeus
ENSXCOG00000002848	-	98	61.178	ENSCPBG00000016624	RAD54L2	94	61.842	Chrysemys_picta_bellii
ENSXCOG00000002848	-	72	50.495	ENSCING00000009208	-	94	50.292	Ciona_intestinalis
ENSXCOG00000002848	-	94	59.837	ENSCANG00000036093	RAD54L2	92	59.603	Colobus_angolensis_palliatus
ENSXCOG00000002848	-	95	59.676	ENSCGRG00000007921	Rad54l2	91	59.618	Cricetulus_griseus_crigri
ENSXCOG00000002848	-	87	72.646	ENSCSEG00000006115	-	94	71.997	Cynoglossus_semilaevis
ENSXCOG00000002848	-	98	58.386	ENSCSEG00000001740	rad54l2	89	59.617	Cynoglossus_semilaevis
ENSXCOG00000002848	-	98	60.129	ENSCVAG00000017887	rad54l2	92	60.029	Cyprinodon_variegatus
ENSXCOG00000002848	-	99	82.915	ENSCVAG00000005376	-	96	84.030	Cyprinodon_variegatus
ENSXCOG00000002848	-	98	61.127	ENSDARG00000063031	rad54l2	95	61.701	Danio_rerio
ENSXCOG00000002848	-	96	59.216	ENSDNOG00000017359	RAD54L2	95	58.773	Dasypus_novemcinctus
ENSXCOG00000002848	-	86	70.178	ENSDORG00000000651	Rad54l2	89	70.178	Dipodomys_ordii
ENSXCOG00000002848	-	61	58.726	FBgn0034976	CG4049	61	52.036	Drosophila_melanogaster
ENSXCOG00000002848	-	95	58.088	ENSETEG00000013290	RAD54L2	98	58.880	Echinops_telfairi
ENSXCOG00000002848	-	73	57.321	ENSEBUG00000001591	rad54l2	75	57.129	Eptatretus_burgeri
ENSXCOG00000002848	-	94	59.837	ENSEASG00005012868	RAD54L2	91	59.603	Equus_asinus_asinus
ENSXCOG00000002848	-	94	59.837	ENSECAG00000014759	RAD54L2	91	59.603	Equus_caballus
ENSXCOG00000002848	-	81	68.359	ENSEEUG00000001759	RAD54L2	84	68.359	Erinaceus_europaeus
ENSXCOG00000002848	-	96	67.682	ENSELUG00000011246	RAD54L2	94	67.088	Esox_lucius
ENSXCOG00000002848	-	94	59.585	ENSFCAG00000018563	RAD54L2	91	59.352	Felis_catus
ENSXCOG00000002848	-	85	66.197	ENSFALG00000008938	RAD54L2	89	66.835	Ficedula_albicollis
ENSXCOG00000002848	-	94	59.689	ENSFDAG00000017084	RAD54L2	91	59.541	Fukomys_damarensis
ENSXCOG00000002848	-	98	61.464	ENSFHEG00000023241	rad54l2	89	60.947	Fundulus_heteroclitus
ENSXCOG00000002848	-	99	83.619	ENSFHEG00000017845	-	94	83.644	Fundulus_heteroclitus
ENSXCOG00000002848	-	93	62.577	ENSGMOG00000010674	rad54l2	97	61.818	Gadus_morhua
ENSXCOG00000002848	-	98	61.390	ENSGALG00000003243	RAD54L2	91	61.849	Gallus_gallus
ENSXCOG00000002848	-	98	61.567	ENSGAFG00000021535	rad54l2	90	61.905	Gambusia_affinis
ENSXCOG00000002848	-	98	92.788	ENSGAFG00000002396	-	96	92.639	Gambusia_affinis
ENSXCOG00000002848	-	98	60.406	ENSGACG00000001558	rad54l2	97	60.299	Gasterosteus_aculeatus
ENSXCOG00000002848	-	88	75.204	ENSGACG00000005642	-	97	74.697	Gasterosteus_aculeatus
ENSXCOG00000002848	-	98	61.395	ENSGAGG00000020971	RAD54L2	96	61.852	Gopherus_agassizii
ENSXCOG00000002848	-	94	59.763	ENSGGOG00000010032	RAD54L2	92	59.529	Gorilla_gorilla
ENSXCOG00000002848	-	98	60.171	ENSHBUG00000012480	rad54l2	93	61.774	Haplochromis_burtoni
ENSXCOG00000002848	-	99	74.896	ENSHBUG00000018930	-	97	74.844	Haplochromis_burtoni
ENSXCOG00000002848	-	94	59.645	ENSHGLG00000012116	RAD54L2	91	59.412	Heterocephalus_glaber_female
ENSXCOG00000002848	-	94	59.645	ENSHGLG00100007205	RAD54L2	91	59.412	Heterocephalus_glaber_male
ENSXCOG00000002848	-	98	58.640	ENSHCOG00000007601	rad54l2	87	58.971	Hippocampus_comes
ENSXCOG00000002848	-	99	68.525	ENSHCOG00000006741	-	93	68.955	Hippocampus_comes
ENSXCOG00000002848	-	98	58.565	ENSIPUG00000019664	rad54l2	92	58.659	Ictalurus_punctatus
ENSXCOG00000002848	-	99	57.676	ENSIPUG00000024973	-	96	59.074	Ictalurus_punctatus
ENSXCOG00000002848	-	96	58.913	ENSSTOG00000010014	RAD54L2	93	58.472	Ictidomys_tridecemlineatus
ENSXCOG00000002848	-	94	59.852	ENSJJAG00000014332	Rad54l2	91	59.414	Jaculus_jaculus
ENSXCOG00000002848	-	99	77.857	ENSKMAG00000002931	-	95	77.936	Kryptolebias_marmoratus
ENSXCOG00000002848	-	98	58.971	ENSKMAG00000001976	rad54l2	94	60.395	Kryptolebias_marmoratus
ENSXCOG00000002848	-	92	75.058	ENSLBEG00000008534	-	100	74.669	Labrus_bergylta
ENSXCOG00000002848	-	97	60.249	ENSLBEG00000018779	rad54l2	93	61.533	Labrus_bergylta
ENSXCOG00000002848	-	99	57.033	ENSLACG00000016004	RAD54L2	93	57.476	Latimeria_chalumnae
ENSXCOG00000002848	-	72	73.248	ENSLOCG00000014222	rad54l2	97	73.050	Lepisosteus_oculatus
ENSXCOG00000002848	-	95	59.719	ENSLAFG00000005966	RAD54L2	89	60.572	Loxodonta_africana
ENSXCOG00000002848	-	94	59.985	ENSMFAG00000041836	RAD54L2	92	59.750	Macaca_fascicularis
ENSXCOG00000002848	-	94	60.059	ENSMMUG00000012002	RAD54L2	91	59.823	Macaca_mulatta
ENSXCOG00000002848	-	94	59.985	ENSMNEG00000035063	RAD54L2	93	59.750	Macaca_nemestrina
ENSXCOG00000002848	-	94	59.985	ENSMLEG00000034668	RAD54L2	93	59.750	Mandrillus_leucophaeus
ENSXCOG00000002848	-	99	75.560	ENSMAMG00000015321	-	100	73.410	Mastacembelus_armatus
ENSXCOG00000002848	-	93	69.084	ENSMAMG00000023761	rad54l2	91	68.053	Mastacembelus_armatus
ENSXCOG00000002848	-	98	61.567	ENSMZEG00005012584	rad54l2	92	61.923	Maylandia_zebra
ENSXCOG00000002848	-	99	74.965	ENSMZEG00005021308	-	96	74.913	Maylandia_zebra
ENSXCOG00000002848	-	98	61.044	ENSMGAG00000002911	RAD54L2	91	61.347	Meleagris_gallopavo
ENSXCOG00000002848	-	72	70.238	ENSMAUG00000011651	Rad54l2	91	70.238	Mesocricetus_auratus
ENSXCOG00000002848	-	98	58.601	ENSMICG00000002777	RAD54L2	91	59.940	Microcebus_murinus
ENSXCOG00000002848	-	94	59.823	ENSMOCG00000022448	Rad54l2	93	59.529	Microtus_ochrogaster
ENSXCOG00000002848	-	97	60.308	ENSMMOG00000021709	rad54l2	92	61.391	Mola_mola
ENSXCOG00000002848	-	97	74.871	ENSMMOG00000016901	-	99	74.431	Mola_mola
ENSXCOG00000002848	-	93	62.689	ENSMODG00000011850	RAD54L2	94	62.585	Monodelphis_domestica
ENSXCOG00000002848	-	92	74.131	ENSMALG00000015084	-	90	80.561	Monopterus_albus
ENSXCOG00000002848	-	94	59.571	MGP_CAROLIEiJ_G0032634	Rad54l2	91	59.338	Mus_caroli
ENSXCOG00000002848	-	94	59.571	ENSMUSG00000040661	Rad54l2	91	59.338	Mus_musculus
ENSXCOG00000002848	-	94	59.276	MGP_PahariEiJ_G0015502	Rad54l2	91	59.044	Mus_pahari
ENSXCOG00000002848	-	94	59.467	MGP_SPRETEiJ_G0033779	Rad54l2	91	59.235	Mus_spretus
ENSXCOG00000002848	-	94	59.763	ENSMPUG00000011865	RAD54L2	91	59.308	Mustela_putorius_furo
ENSXCOG00000002848	-	94	60.251	ENSMLUG00000004605	RAD54L2	91	60.015	Myotis_lucifugus
ENSXCOG00000002848	-	94	60.088	ENSNGAG00000015629	Rad54l2	91	59.927	Nannospalax_galili
ENSXCOG00000002848	-	99	75.035	ENSNBRG00000022847	-	97	74.826	Neolamprologus_brichardi
ENSXCOG00000002848	-	98	60.482	ENSNBRG00000001937	rad54l2	93	60.987	Neolamprologus_brichardi
ENSXCOG00000002848	-	94	59.763	ENSNLEG00000007038	RAD54L2	93	59.529	Nomascus_leucogenys
ENSXCOG00000002848	-	93	72.744	ENSMEUG00000009835	RAD54L2	93	72.744	Notamacropus_eugenii
ENSXCOG00000002848	-	94	59.467	ENSODEG00000018266	RAD54L2	91	59.235	Octodon_degus
ENSXCOG00000002848	-	96	77.935	ENSONIG00000001663	-	94	77.778	Oreochromis_niloticus
ENSXCOG00000002848	-	99	60.854	ENSONIG00000014468	rad54l2	94	61.087	Oreochromis_niloticus
ENSXCOG00000002848	-	98	60.156	ENSOANG00000012793	RAD54L2	94	61.184	Ornithorhynchus_anatinus
ENSXCOG00000002848	-	94	60.221	ENSOCUG00000017577	RAD54L2	91	60.059	Oryctolagus_cuniculus
ENSXCOG00000002848	-	99	72.939	ENSORLG00000002714	-	96	72.836	Oryzias_latipes
ENSXCOG00000002848	-	99	59.756	ENSORLG00000002276	rad54l2	90	60.824	Oryzias_latipes
ENSXCOG00000002848	-	99	59.747	ENSORLG00020003470	rad54l2	93	60.307	Oryzias_latipes_hni
ENSXCOG00000002848	-	99	72.817	ENSORLG00020019256	-	96	73.028	Oryzias_latipes_hni
ENSXCOG00000002848	-	96	73.592	ENSORLG00015013408	-	93	73.504	Oryzias_latipes_hsok
ENSXCOG00000002848	-	99	60.820	ENSORLG00015021530	rad54l2	92	61.401	Oryzias_latipes_hsok
ENSXCOG00000002848	-	99	58.678	ENSOMEG00000005597	rad54l2	92	58.635	Oryzias_melastigma
ENSXCOG00000002848	-	99	72.301	ENSOMEG00000008216	-	95	72.786	Oryzias_melastigma
ENSXCOG00000002848	-	81	60.574	ENSOGAG00000012442	RAD54L2	97	59.983	Otolemur_garnettii
ENSXCOG00000002848	-	94	60.089	ENSOARG00000007264	RAD54L2	91	59.632	Ovis_aries
ENSXCOG00000002848	-	94	59.763	ENSPPAG00000038472	RAD54L2	92	59.529	Pan_paniscus
ENSXCOG00000002848	-	94	59.585	ENSPPRG00000010212	RAD54L2	91	59.352	Panthera_pardus
ENSXCOG00000002848	-	94	59.585	ENSPTIG00000002240	RAD54L2	91	59.352	Panthera_tigris_altaica
ENSXCOG00000002848	-	94	59.763	ENSPTRG00000014974	RAD54L2	92	59.529	Pan_troglodytes
ENSXCOG00000002848	-	94	59.985	ENSPANG00000000857	RAD54L2	92	59.750	Papio_anubis
ENSXCOG00000002848	-	99	64.592	ENSPKIG00000001065	rad54l2	94	65.689	Paramormyrops_kingsleyae
ENSXCOG00000002848	-	72	69.854	ENSPSIG00000014346	RAD54L2	93	69.767	Pelodiscus_sinensis
ENSXCOG00000002848	-	98	68.205	ENSPMGG00000000641	-	96	68.984	Periophthalmus_magnuspinnatus
ENSXCOG00000002848	-	90	61.278	ENSPMGG00000002208	rad54l2	96	62.604	Periophthalmus_magnuspinnatus
ENSXCOG00000002848	-	94	59.265	ENSPEMG00000012051	Rad54l2	91	59.368	Peromyscus_maniculatus_bairdii
ENSXCOG00000002848	-	93	61.602	ENSPCIG00000018143	RAD54L2	87	65.785	Phascolarctos_cinereus
ENSXCOG00000002848	-	100	90.078	ENSPFOG00000000197	-	96	90.361	Poecilia_formosa
ENSXCOG00000002848	-	98	60.691	ENSPFOG00000018644	rad54l2	92	59.296	Poecilia_formosa
ENSXCOG00000002848	-	98	61.319	ENSPLAG00000006015	rad54l2	93	59.752	Poecilia_latipinna
ENSXCOG00000002848	-	100	90.469	ENSPLAG00000013908	-	97	90.469	Poecilia_latipinna
ENSXCOG00000002848	-	100	89.794	ENSPMEG00000009878	-	97	90.078	Poecilia_mexicana
ENSXCOG00000002848	-	98	61.255	ENSPMEG00000021535	rad54l2	91	61.427	Poecilia_mexicana
ENSXCOG00000002848	-	97	60.332	ENSPREG00000008628	rad54l2	97	60.316	Poecilia_reticulata
ENSXCOG00000002848	-	100	89.124	ENSPREG00000013377	RAD54L2	96	89.745	Poecilia_reticulata
ENSXCOG00000002848	-	94	59.837	ENSPPYG00000013831	RAD54L2	95	59.603	Pongo_abelii
ENSXCOG00000002848	-	78	60.700	ENSPCAG00000011952	RAD54L2	82	60.700	Procavia_capensis
ENSXCOG00000002848	-	98	58.954	ENSPCOG00000015983	RAD54L2	89	59.941	Propithecus_coquereli
ENSXCOG00000002848	-	97	60.546	ENSPNYG00000020693	rad54l2	93	61.426	Pundamilia_nyererei
ENSXCOG00000002848	-	99	74.965	ENSPNYG00000011435	-	97	74.913	Pundamilia_nyererei
ENSXCOG00000002848	-	99	62.101	ENSPNAG00000011583	-	94	63.522	Pygocentrus_nattereri
ENSXCOG00000002848	-	98	61.281	ENSPNAG00000006451	rad54l2	94	60.247	Pygocentrus_nattereri
ENSXCOG00000002848	-	70	68.934	ENSRNOG00000049489	LOC102552166	91	68.934	Rattus_norvegicus
ENSXCOG00000002848	-	94	56.195	ENSRNOG00000013570	Rad54l2	91	56.089	Rattus_norvegicus
ENSXCOG00000002848	-	94	59.837	ENSRBIG00000032434	RAD54L2	94	59.001	Rhinopithecus_bieti
ENSXCOG00000002848	-	94	59.837	ENSRROG00000042309	RAD54L2	93	59.603	Rhinopithecus_roxellana
ENSXCOG00000002848	-	94	59.615	ENSSBOG00000002139	RAD54L2	91	59.382	Saimiri_boliviensis_boliviensis
ENSXCOG00000002848	-	98	60.953	ENSSHAG00000008604	RAD54L2	93	61.213	Sarcophilus_harrisii
ENSXCOG00000002848	-	99	65.629	ENSSFOG00015019014	rad54l2	94	67.255	Scleropages_formosus
ENSXCOG00000002848	-	99	58.158	ENSSMAG00000020933	rad54l2	93	59.796	Scophthalmus_maximus
ENSXCOG00000002848	-	99	72.517	ENSSMAG00000009978	-	96	72.575	Scophthalmus_maximus
ENSXCOG00000002848	-	99	75.087	ENSSDUG00000016711	-	95	75.444	Seriola_dumerili
ENSXCOG00000002848	-	98	60.764	ENSSDUG00000014268	rad54l2	96	59.165	Seriola_dumerili
ENSXCOG00000002848	-	99	75.532	ENSSLDG00000023388	-	99	75.781	Seriola_lalandi_dorsalis
ENSXCOG00000002848	-	98	60.569	ENSSLDG00000023959	rad54l2	97	61.704	Seriola_lalandi_dorsalis
ENSXCOG00000002848	-	98	61.769	ENSSPAG00000016532	rad54l2	92	62.378	Stegastes_partitus
ENSXCOG00000002848	-	96	76.377	ENSSPAG00000006371	-	98	76.616	Stegastes_partitus
ENSXCOG00000002848	-	98	58.984	ENSSSCG00000011425	RAD54L2	91	59.589	Sus_scrofa
ENSXCOG00000002848	-	98	61.687	ENSTGUG00000004888	RAD54L2	91	62.115	Taeniopygia_guttata
ENSXCOG00000002848	-	98	59.659	ENSTRUG00000013962	rad54l2	91	60.031	Takifugu_rubripes
ENSXCOG00000002848	-	99	70.830	ENSTRUG00000011066	-	97	70.972	Takifugu_rubripes
ENSXCOG00000002848	-	79	74.387	ENSTNIG00000006049	-	100	74.205	Tetraodon_nigroviridis
ENSXCOG00000002848	-	77	69.174	ENSTNIG00000014694	rad54l2	98	67.311	Tetraodon_nigroviridis
ENSXCOG00000002848	-	89	59.080	ENSTBEG00000003377	RAD54L2	96	58.842	Tupaia_belangeri
ENSXCOG00000002848	-	94	59.911	ENSUAMG00000020891	RAD54L2	94	58.963	Ursus_americanus
ENSXCOG00000002848	-	84	70.289	ENSUMAG00000021678	RAD54L2	93	70.289	Ursus_maritimus
ENSXCOG00000002848	-	95	59.617	ENSVVUG00000026874	RAD54L2	95	59.308	Vulpes_vulpes
ENSXCOG00000002848	-	98	59.355	ENSXETG00000000070	rad54l2	90	61.192	Xenopus_tropicalis
ENSXCOG00000002848	-	98	61.079	ENSXMAG00000017182	rad54l2	97	60.957	Xiphophorus_maculatus
ENSXCOG00000002848	-	100	92.346	ENSXMAG00000019370	-	96	92.346	Xiphophorus_maculatus