EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000002882 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
5848 bases
Position
chrKQ557223.1:12477308-12483155
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000003679MMR_HSR1PF01926.231.5e-0911
ENSXCOP00000003673MMR_HSR1PF01926.231.6e-0911
ENSXCOP00000003680MMR_HSR1PF01926.231.8e-0911
ENSXCOP00000003677MMR_HSR1PF01926.232.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000003719-663-ENSXCOP00000003680220 (aa)--
ENSXCOT00000003718-633-ENSXCOP00000003679210 (aa)--
ENSXCOT00000003712-633-ENSXCOP00000003673210 (aa)--
ENSXCOT00000003716-543-ENSXCOP00000003677180 (aa)--
Gene Model
Click here to download ENSXCOG00000002882's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000002882's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000002882-8448.026ENSXCOG00000001487-9543.023
ENSXCOG00000002882-8936.257ENSXCOG00000009364arfrp19332.787
ENSXCOG00000002882-8341.558ENSXCOG00000011060arl119237.805
ENSXCOG00000002882-5530.435ENSXCOG00000006154-5433.333
ENSXCOG00000002882-8635.976ENSXCOG00000003892arl4d7936.420
ENSXCOG00000002882-8437.342ENSXCOG00000003923-7837.342
ENSXCOG00000002882-9673.563ENSXCOG00000003337arl3l29373.563
ENSXCOG00000002882-7431.081ENSXCOG00000013842rab1ab7131.034
ENSXCOG00000002882-9156.707ENSXCOG00000006377arl28956.707
ENSXCOG00000002882-8448.026ENSXCOG00000019704arf3b9542.197
ENSXCOG00000002882-9347.024ENSXCOG00000020384-9247.024
ENSXCOG00000002882-8448.026ENSXCOG00000004139arf2b8448.026
ENSXCOG00000002882-7637.681ENSXCOG00000004543arl8bb7437.681
ENSXCOG00000002882-7431.081ENSXCOG00000010770-5831.507
ENSXCOG00000002882-8448.026ENSXCOG00000016687-8348.026
ENSXCOG00000002882-8438.608ENSXCOG00000016119arl4cb7938.608
ENSXCOG00000002882-7633.333ENSXCOG00000016886arl8a7333.333
ENSXCOG00000002882-8340.667ENSXCOG00000011539arl86840.667
ENSXCOG00000002882-7337.594ENSXCOG00000013402arl8ba8137.037
ENSXCOG00000002882-8437.342ENSXCOG00000007236arl4aa7937.342
ENSXCOG00000002882-8442.105ENSXCOG00000017380arl5c8542.105
ENSXCOG00000002882-9682.857ENSXCOG00000005902arl38382.857
ENSXCOG00000002882-9348.214ENSXCOG00000015162-9147.619
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000002882-9683.333ENSG00000138175ARL39683.333Homo_sapiens
ENSXCOG00000002882-9693.143ENSAPOG00000008070-9693.143Acanthochromis_polyacanthus
ENSXCOG00000002882-9782.386ENSAPOG00000024460arl39382.927Acanthochromis_polyacanthus
ENSXCOG00000002882-9682.759ENSAMEG00000018754-9682.759Ailuropoda_melanoleuca
ENSXCOG00000002882-9584.393ENSAMEG00000017816-9484.393Ailuropoda_melanoleuca
ENSXCOG00000002882-9192.121ENSACIG00000019225-9194.937Amphilophus_citrinellus
ENSXCOG00000002882-9693.678ENSAOCG00000024749-9593.678Amphiprion_ocellaris
ENSXCOG00000002882-9782.955ENSAOCG00000022197arl39782.955Amphiprion_ocellaris
ENSXCOG00000002882-9683.429ENSAPEG00000023428arl39583.429Amphiprion_percula
ENSXCOG00000002882-9693.143ENSAPEG00000014648-9693.143Amphiprion_percula
ENSXCOG00000002882-9488.304ENSATEG00000018332-9688.304Anabas_testudineus
ENSXCOG00000002882-9782.386ENSATEG00000003947arl39782.386Anabas_testudineus
ENSXCOG00000002882-9583.237ENSAPLG00000016017ARL39683.237Anas_platyrhynchos
ENSXCOG00000002882-9268.072ENSANAG00000027007ARL38968.072Aotus_nancymaae
ENSXCOG00000002882-9782.386ENSACLG00000027139arl39782.386Astatotilapia_calliptera
ENSXCOG00000002882-9888.889ENSACLG00000012519-9194.012Astatotilapia_calliptera
ENSXCOG00000002882-9485.207ENSAMXG00000034370-9285.030Astyanax_mexicanus
ENSXCOG00000002882-9683.333ENSAMXG00000043381zgc:1101979683.333Astyanax_mexicanus
ENSXCOG00000002882-9881.461ENSAMXG00000037720arl39781.818Astyanax_mexicanus
ENSXCOG00000002882-9783.523ENSBTAG00000004318ARL38983.523Bos_taurus
ENSXCOG00000002882-9683.908ENSCJAG00000040244ARL39683.908Callithrix_jacchus
ENSXCOG00000002882-9584.393ENSCAFG00000010243ARL39584.393Canis_familiaris
ENSXCOG00000002882-9783.523ENSCAFG00020010250ARL38984.393Canis_lupus_dingo
ENSXCOG00000002882-9683.908ENSCHIG00000012000ARL39683.908Capra_hircus
ENSXCOG00000002882-9782.955ENSCPOG00000014473ARL39483.815Cavia_porcellus
ENSXCOG00000002882-9672.989ENSCCAG00000028563ARL39575.862Cebus_capucinus
ENSXCOG00000002882-9675.862ENSCATG00000019333ARL39570.690Cercocebus_atys
ENSXCOG00000002882-9283.929ENSCLAG00000001055ARL39583.929Chinchilla_lanigera
ENSXCOG00000002882-9583.815ENSCSAG00000005408ARL39683.815Chlorocebus_sabaeus
ENSXCOG00000002882-5889.423ENSCHOG00000011898ARL35590.000Choloepus_hoffmanni
ENSXCOG00000002882-9683.908ENSCPBG00000002364ARL39683.908Chrysemys_picta_bellii
ENSXCOG00000002882-8475.000ENSCING00000016182-9272.455Ciona_intestinalis
ENSXCOG00000002882-9274.096ENSCSAVG00000008290-8774.096Ciona_savignyi
ENSXCOG00000002882-9683.908ENSCANG00000042758ARL39683.908Colobus_angolensis_palliatus
ENSXCOG00000002882-9682.759ENSCGRG00001020323Arl39682.759Cricetulus_griseus_chok1gshd
ENSXCOG00000002882-9682.759ENSCGRG00000002057Arl39682.759Cricetulus_griseus_crigri
ENSXCOG00000002882-9682.857ENSCSEG00000013309arl39582.857Cynoglossus_semilaevis
ENSXCOG00000002882-9686.857ENSCSEG00000018550-9289.820Cynoglossus_semilaevis
ENSXCOG00000002882-9695.402ENSCVAG00000016797-9595.402Cyprinodon_variegatus
ENSXCOG00000002882-9782.386ENSCVAG00000021960arl39782.386Cyprinodon_variegatus
ENSXCOG00000002882-9782.386ENSDARG00000071409arl39782.386Danio_rerio
ENSXCOG00000002882-9783.523ENSDNOG00000033500ARL38083.523Dasypus_novemcinctus
ENSXCOG00000002882-9683.908ENSDORG00000012086Arl39683.908Dipodomys_ordii
ENSXCOG00000002882-5790.291ENSETEG00000002373ARL35590.909Echinops_telfairi
ENSXCOG00000002882-8486.842ENSEASG00005015209ARL39086.842Equus_asinus_asinus
ENSXCOG00000002882-8486.842ENSECAG00000000300ARL39086.842Equus_caballus
ENSXCOG00000002882-9283.832ENSEEUG00000004224ARL310083.832Erinaceus_europaeus
ENSXCOG00000002882-9385.629ENSELUG00000013130-9285.629Esox_lucius
ENSXCOG00000002882-9584.211ENSELUG00000018031arl39482.857Esox_lucius
ENSXCOG00000002882-9683.908ENSFCAG00000001251ARL39683.908Felis_catus
ENSXCOG00000002882-9682.759ENSFALG00000008720ARL39682.759Ficedula_albicollis
ENSXCOG00000002882-9584.393ENSFDAG00000006628ARL39684.393Fukomys_damarensis
ENSXCOG00000002882-9782.386ENSFHEG00000010692arl39782.386Fundulus_heteroclitus
ENSXCOG00000002882-9695.402ENSFHEG00000018216-8695.402Fundulus_heteroclitus
ENSXCOG00000002882-9782.386ENSGMOG00000001544arl39782.386Gadus_morhua
ENSXCOG00000002882-9682.759ENSGALG00000008049ARL39682.759Gallus_gallus
ENSXCOG00000002882-9881.461ENSGAFG00000005872arl39681.765Gambusia_affinis
ENSXCOG00000002882-9389.286ENSGAFG00000010573-9089.286Gambusia_affinis
ENSXCOG00000002882-9286.747ENSGACG00000016756-9186.747Gasterosteus_aculeatus
ENSXCOG00000002882-9782.955ENSGACG00000003070arl39085.030Gasterosteus_aculeatus
ENSXCOG00000002882-8885.535ENSGAGG00000024365ARL39485.535Gopherus_agassizii
ENSXCOG00000002882-9683.333ENSGGOG00000003895ARL39683.333Gorilla_gorilla
ENSXCOG00000002882-9888.889ENSHBUG00000023185-9194.012Haplochromis_burtoni
ENSXCOG00000002882-9782.386ENSHBUG00000000803arl39782.386Haplochromis_burtoni
ENSXCOG00000002882-9683.333ENSHGLG00000003244ARL39683.333Heterocephalus_glaber_female
ENSXCOG00000002882-9583.815ENSHGLG00100016401ARL39683.815Heterocephalus_glaber_male
ENSXCOG00000002882-9781.818ENSHCOG00000015600arl39781.818Hippocampus_comes
ENSXCOG00000002882-9782.955ENSIPUG00000008227arl39683.333Ictalurus_punctatus
ENSXCOG00000002882-9881.461ENSIPUG00000015451arl39781.818Ictalurus_punctatus
ENSXCOG00000002882-9683.908ENSSTOG00000014453ARL39683.908Ictidomys_tridecemlineatus
ENSXCOG00000002882-9682.759ENSJJAG00000001249Arl39682.759Jaculus_jaculus
ENSXCOG00000002882-9392.814ENSKMAG00000017791-9292.814Kryptolebias_marmoratus
ENSXCOG00000002882-9782.386ENSKMAG00000009772arl39782.386Kryptolebias_marmoratus
ENSXCOG00000002882-9782.386ENSLBEG00000025929arl39782.386Labrus_bergylta
ENSXCOG00000002882-9689.143ENSLBEG00000017331-9292.216Labrus_bergylta
ENSXCOG00000002882-9881.564ENSLACG00000001595ARL39683.815Latimeria_chalumnae
ENSXCOG00000002882-9386.228ENSLOCG00000015256-9286.228Lepisosteus_oculatus
ENSXCOG00000002882-9683.908ENSLOCG00000012693arl39683.908Lepisosteus_oculatus
ENSXCOG00000002882-9584.393ENSLAFG00000005070ARL39584.393Loxodonta_africana
ENSXCOG00000002882-9683.333ENSMFAG00000045820ARL39683.333Macaca_fascicularis
ENSXCOG00000002882-9683.333ENSMMUG00000047000ARL39683.333Macaca_mulatta
ENSXCOG00000002882-9675.287ENSMNEG00000041783ARL39570.115Macaca_nemestrina
ENSXCOG00000002882-9692.529ENSMAMG00000012951-9295.210Mastacembelus_armatus
ENSXCOG00000002882-9682.286ENSMAMG00000002666arl39282.286Mastacembelus_armatus
ENSXCOG00000002882-9782.386ENSMZEG00005004024arl39782.386Maylandia_zebra
ENSXCOG00000002882-9691.379ENSMZEG00005018934-8994.578Maylandia_zebra
ENSXCOG00000002882-9583.237ENSMGAG00000010320ARL39683.237Meleagris_gallopavo
ENSXCOG00000002882-9683.908ENSMICG00000012249ARL39683.908Microcebus_murinus
ENSXCOG00000002882-9682.759ENSMOCG00000015961Arl39682.759Microtus_ochrogaster
ENSXCOG00000002882-9587.861ENSMMOG00000009663-9087.273Mola_mola
ENSXCOG00000002882-9781.250ENSMMOG00000013128arl39781.250Mola_mola
ENSXCOG00000002882-9782.386ENSMALG00000005347arl310084.615Monopterus_albus
ENSXCOG00000002882-9682.759MGP_CAROLIEiJ_G0023039Arl39682.759Mus_caroli
ENSXCOG00000002882-9682.759ENSMUSG00000025035Arl39682.759Mus_musculus
ENSXCOG00000002882-9683.333MGP_PahariEiJ_G0014529Arl39683.333Mus_pahari
ENSXCOG00000002882-9682.759MGP_SPRETEiJ_G0023960Arl39682.759Mus_spretus
ENSXCOG00000002882-9683.908ENSMPUG00000016864ARL39683.908Mustela_putorius_furo
ENSXCOG00000002882-9584.393ENSMLUG00000012603ARL39584.393Myotis_lucifugus
ENSXCOG00000002882-9682.184ENSNGAG00000024014Arl39682.184Nannospalax_galili
ENSXCOG00000002882-9691.954ENSNBRG00000005929-8995.181Neolamprologus_brichardi
ENSXCOG00000002882-9782.386ENSNBRG00000007962arl39782.386Neolamprologus_brichardi
ENSXCOG00000002882-9682.184ENSNLEG00000015183ARL39682.184Nomascus_leucogenys
ENSXCOG00000002882-9683.333ENSOPRG00000012347ARL39683.333Ochotona_princeps
ENSXCOG00000002882-9683.908ENSODEG00000008389ARL39683.908Octodon_degus
ENSXCOG00000002882-9682.857ENSONIG00000015815arl39482.857Oreochromis_niloticus
ENSXCOG00000002882-9692.000ENSONIG00000000203-9195.210Oreochromis_niloticus
ENSXCOG00000002882-9683.908ENSOANG00000001653ARL39683.908Ornithorhynchus_anatinus
ENSXCOG00000002882-9683.333ENSOCUG00000005792ARL39683.333Oryctolagus_cuniculus
ENSXCOG00000002882-9782.386ENSORLG00000010952arl39782.386Oryzias_latipes
ENSXCOG00000002882-9591.379ENSORLG00000007235-8893.373Oryzias_latipes
ENSXCOG00000002882-9591.379ENSORLG00020019239-9292.814Oryzias_latipes_hni
ENSXCOG00000002882-9782.386ENSORLG00020002949arl39782.386Oryzias_latipes_hni
ENSXCOG00000002882-9782.386ENSORLG00015002410arl39782.386Oryzias_latipes_hsok
ENSXCOG00000002882-9393.413ENSORLG00015007242-9293.413Oryzias_latipes_hsok
ENSXCOG00000002882-9782.386ENSOMEG00000007691arl39782.386Oryzias_melastigma
ENSXCOG00000002882-9691.954ENSOMEG00000003861-9294.611Oryzias_melastigma
ENSXCOG00000002882-9683.908ENSOGAG00000003631ARL39683.908Otolemur_garnettii
ENSXCOG00000002882-9683.908ENSOARG00000001689ARL39683.908Ovis_aries
ENSXCOG00000002882-9683.333ENSPPAG00000034961ARL39683.333Pan_paniscus
ENSXCOG00000002882-9683.908ENSPPRG00000007715ARL39683.908Panthera_pardus
ENSXCOG00000002882-9584.393ENSPTIG00000021020ARL39584.393Panthera_tigris_altaica
ENSXCOG00000002882-9683.333ENSPANG00000033639ARL39683.333Papio_anubis
ENSXCOG00000002882-9685.465ENSPKIG00000017974-9286.826Paramormyrops_kingsleyae
ENSXCOG00000002882-9384.431ENSPKIG00000012886arl39581.707Paramormyrops_kingsleyae
ENSXCOG00000002882-9584.393ENSPSIG00000003938ARL39584.393Pelodiscus_sinensis
ENSXCOG00000002882-9681.714ENSPMGG00000020994arl39281.714Periophthalmus_magnuspinnatus
ENSXCOG00000002882-9683.333ENSPMGG00000008658-9583.333Periophthalmus_magnuspinnatus
ENSXCOG00000002882-9682.759ENSPEMG00000012608Arl39682.759Peromyscus_maniculatus_bairdii
ENSXCOG00000002882-9684.483ENSPMAG00000009519-9684.483Petromyzon_marinus
ENSXCOG00000002882-9683.908ENSPCIG00000028982ARL39683.908Phascolarctos_cinereus
ENSXCOG00000002882-9899.432ENSPFOG00000019829-9696.000Poecilia_formosa
ENSXCOG00000002882-97100.000ENSPLAG00000016871-9691.705Poecilia_latipinna
ENSXCOG00000002882-9782.386ENSPLAG00000001962arl39681.765Poecilia_latipinna
ENSXCOG00000002882-99100.000ENSPMEG00000017082-9696.000Poecilia_mexicana
ENSXCOG00000002882-9782.386ENSPMEG00000008907arl39084.049Poecilia_mexicana
ENSXCOG00000002882-9798.857ENSPREG00000014738-9695.506Poecilia_reticulata
ENSXCOG00000002882-9385.119ENSPREG00000003821arl37485.119Poecilia_reticulata
ENSXCOG00000002882-9683.333ENSPPYG00000002608ARL39683.333Pongo_abelii
ENSXCOG00000002882-9683.908ENSPCAG00000009867ARL39683.908Procavia_capensis
ENSXCOG00000002882-9683.333ENSPCOG00000024271ARL39683.333Propithecus_coquereli
ENSXCOG00000002882-9684.483ENSPVAG00000011297ARL39684.483Pteropus_vampyrus
ENSXCOG00000002882-9782.386ENSPNYG00000003962arl39782.386Pundamilia_nyererei
ENSXCOG00000002882-9690.805ENSPNYG00000009889-9390.805Pundamilia_nyererei
ENSXCOG00000002882-9384.431ENSPNAG00000004165-9284.431Pygocentrus_nattereri
ENSXCOG00000002882-9781.818ENSPNAG00000027037arl39781.818Pygocentrus_nattereri
ENSXCOG00000002882-9683.908ENSPNAG00000014755zgc:1101979683.908Pygocentrus_nattereri
ENSXCOG00000002882-9682.759ENSRNOG00000019973Arl39482.759Rattus_norvegicus
ENSXCOG00000002882-9683.908ENSRBIG00000031934ARL39683.908Rhinopithecus_bieti
ENSXCOG00000002882-9683.908ENSRROG00000030757ARL39683.908Rhinopithecus_roxellana
ENSXCOG00000002882-9584.393ENSSBOG00000030806ARL37984.393Saimiri_boliviensis_boliviensis
ENSXCOG00000002882-9585.549ENSSHAG00000018738ARL39585.549Sarcophilus_harrisii
ENSXCOG00000002882-9387.425ENSSFOG00015015338-9587.425Scleropages_formosus
ENSXCOG00000002882-9782.386ENSSMAG00000005803arl39782.386Scophthalmus_maximus
ENSXCOG00000002882-9782.386ENSSDUG00000013976arl39782.386Seriola_dumerili
ENSXCOG00000002882-9693.714ENSSDUG00000004762-9693.714Seriola_dumerili
ENSXCOG00000002882-9693.714ENSSLDG00000009955-9693.714Seriola_lalandi_dorsalis
ENSXCOG00000002882-9782.386ENSSLDG00000017576arl39782.386Seriola_lalandi_dorsalis
ENSXCOG00000002882-9386.228ENSSPUG00000011154ARL38486.228Sphenodon_punctatus
ENSXCOG00000002882-9782.386ENSSPAG00000009787arl39782.386Stegastes_partitus
ENSXCOG00000002882-9693.182ENSSPAG00000001502-9193.182Stegastes_partitus
ENSXCOG00000002882-9683.908ENSSSCG00000031782ARL39885.629Sus_scrofa
ENSXCOG00000002882-9583.237ENSTGUG00000010164ARL39683.237Taeniopygia_guttata
ENSXCOG00000002882-9681.143ENSTRUG00000018668-8881.143Takifugu_rubripes
ENSXCOG00000002882-9681.034ENSTRUG00000018107arl39681.034Takifugu_rubripes
ENSXCOG00000002882-9582.081ENSTNIG00000009030-9582.081Tetraodon_nigroviridis
ENSXCOG00000002882-9781.250ENSTNIG00000004344arl39781.250Tetraodon_nigroviridis
ENSXCOG00000002882-9580.347ENSTBEG00000004286ARL39680.347Tupaia_belangeri
ENSXCOG00000002882-9683.908ENSTTRG00000012610ARL39682.759Tursiops_truncatus
ENSXCOG00000002882-9683.333ENSUAMG00000026665ARL39683.333Ursus_americanus
ENSXCOG00000002882-9683.908ENSUMAG00000023500ARL39683.908Ursus_maritimus
ENSXCOG00000002882-9584.393ENSVPAG00000007391ARL39684.393Vicugna_pacos
ENSXCOG00000002882-9683.908ENSVVUG00000004222ARL39683.908Vulpes_vulpes
ENSXCOG00000002882-9584.393ENSXETG00000015225arl39584.393Xenopus_tropicalis
ENSXCOG00000002882-9371.171ENSXMAG00000022054-10072.574Xiphophorus_maculatus
ENSXCOG00000002882-9782.386ENSXMAG00000015696arl39482.386Xiphophorus_maculatus

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