EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003003 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2487 bases
Position: chrKQ557225.1:34991313-34993799
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003823	RRM_1	PF00076.22	1.9e-30	1	2
ENSXCOP00000003823	RRM_1	PF00076.22	1.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003866	-	2487	-	ENSXCOP00000003823	828 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003003	-	100	60.905	ENSXCOG00000006328	rbm15	100	60.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003003	-	100	54.390	ENSG00000162775	RBM15	98	56.203	Homo_sapiens
ENSXCOG00000003003	-	100	61.387	ENSAPOG00000018748	rbm15	100	61.618	Acanthochromis_polyacanthus
ENSXCOG00000003003	-	96	75.366	ENSAPOG00000017590	-	100	75.244	Acanthochromis_polyacanthus
ENSXCOG00000003003	-	99	54.019	ENSAMEG00000011540	RBM15	95	56.250	Ailuropoda_melanoleuca
ENSXCOG00000003003	-	100	60.710	ENSACIG00000004343	rbm15	100	60.805	Amphilophus_citrinellus
ENSXCOG00000003003	-	100	73.364	ENSACIG00000019811	-	100	73.715	Amphilophus_citrinellus
ENSXCOG00000003003	-	100	75.469	ENSAOCG00000021969	-	100	75.822	Amphiprion_ocellaris
ENSXCOG00000003003	-	100	61.618	ENSAOCG00000016849	rbm15	100	61.850	Amphiprion_ocellaris
ENSXCOG00000003003	-	100	61.503	ENSAPEG00000020077	rbm15	100	61.734	Amphiprion_percula
ENSXCOG00000003003	-	99	74.941	ENSAPEG00000015151	-	98	75.765	Amphiprion_percula
ENSXCOG00000003003	-	100	74.186	ENSATEG00000005926	-	100	74.302	Anabas_testudineus
ENSXCOG00000003003	-	100	61.530	ENSATEG00000019337	rbm15	100	61.761	Anabas_testudineus
ENSXCOG00000003003	-	99	53.970	ENSANAG00000020673	RBM15	94	55.879	Aotus_nancymaae
ENSXCOG00000003003	-	99	73.388	ENSACLG00000022961	-	97	73.388	Astatotilapia_calliptera
ENSXCOG00000003003	-	100	60.964	ENSACLG00000001673	rbm15	100	61.194	Astatotilapia_calliptera
ENSXCOG00000003003	-	100	62.799	ENSAMXG00000026103	rbm15	100	63.854	Astyanax_mexicanus
ENSXCOG00000003003	-	99	54.984	ENSBTAG00000012555	RBM15	95	56.419	Bos_taurus
ENSXCOG00000003003	-	99	54.283	ENSCJAG00000003411	RBM15	94	56.142	Callithrix_jacchus
ENSXCOG00000003003	-	99	54.821	ENSCAFG00000019789	RBM15	94	55.724	Canis_familiaris
ENSXCOG00000003003	-	99	54.762	ENSCAFG00020009671	RBM15	94	55.724	Canis_lupus_dingo
ENSXCOG00000003003	-	99	54.341	ENSCHIG00000026774	RBM15	95	56.311	Capra_hircus
ENSXCOG00000003003	-	99	54.555	ENSTSYG00000000106	RBM15	94	56.324	Carlito_syrichta
ENSXCOG00000003003	-	70	56.037	ENSCAPG00000013057	RBM15	98	56.515	Cavia_aperea
ENSXCOG00000003003	-	99	53.433	ENSCPOG00000007520	RBM15	95	55.819	Cavia_porcellus
ENSXCOG00000003003	-	99	53.698	ENSCCAG00000036780	RBM15	94	55.879	Cebus_capucinus
ENSXCOG00000003003	-	99	53.813	ENSCATG00000015743	RBM15	94	55.940	Cercocebus_atys
ENSXCOG00000003003	-	99	53.970	ENSCLAG00000008406	RBM15	95	56.573	Chinchilla_lanigera
ENSXCOG00000003003	-	99	53.813	ENSCSAG00000001563	RBM15	93	55.940	Chlorocebus_sabaeus
ENSXCOG00000003003	-	86	53.661	ENSCPBG00000001662	RBM15	100	53.320	Chrysemys_picta_bellii
ENSXCOG00000003003	-	99	53.598	ENSCANG00000038717	RBM15	93	55.724	Colobus_angolensis_palliatus
ENSXCOG00000003003	-	99	53.441	ENSCGRG00001001004	Rbm15	95	55.459	Cricetulus_griseus_chok1gshd
ENSXCOG00000003003	-	99	53.441	ENSCGRG00000010592	Rbm15	95	55.459	Cricetulus_griseus_crigri
ENSXCOG00000003003	-	100	62.197	ENSCSEG00000004062	rbm15	100	62.543	Cynoglossus_semilaevis
ENSXCOG00000003003	-	100	64.931	ENSCSEG00000002314	-	100	64.468	Cynoglossus_semilaevis
ENSXCOG00000003003	-	100	82.325	ENSCVAG00000004005	-	100	82.325	Cyprinodon_variegatus
ENSXCOG00000003003	-	100	60.233	ENSCVAG00000013185	rbm15	100	60.349	Cyprinodon_variegatus
ENSXCOG00000003003	-	100	63.164	ENSDARG00000073847	rbm15	100	63.279	Danio_rerio
ENSXCOG00000003003	-	68	54.259	ENSDNOG00000032007	RBM15	86	58.003	Dasypus_novemcinctus
ENSXCOG00000003003	-	87	57.908	ENSDORG00000005669	Rbm15	100	56.176	Dipodomys_ordii
ENSXCOG00000003003	-	99	54.176	ENSEASG00005005359	RBM15	95	56.142	Equus_asinus_asinus
ENSXCOG00000003003	-	99	54.176	ENSECAG00000023660	RBM15	95	56.142	Equus_caballus
ENSXCOG00000003003	-	99	59.637	ENSELUG00000016087	rbm15	97	60.204	Esox_lucius
ENSXCOG00000003003	-	100	65.105	ENSELUG00000014614	RBM15	100	65.340	Esox_lucius
ENSXCOG00000003003	-	99	54.176	ENSFCAG00000028208	RBM15	94	56.142	Felis_catus
ENSXCOG00000003003	-	66	56.441	ENSFALG00000003062	RBM15	99	61.677	Ficedula_albicollis
ENSXCOG00000003003	-	99	53.698	ENSFDAG00000020743	RBM15	95	55.879	Fukomys_damarensis
ENSXCOG00000003003	-	100	81.324	ENSFHEG00000005559	-	100	81.324	Fundulus_heteroclitus
ENSXCOG00000003003	-	100	60.793	ENSFHEG00000005024	rbm15	100	60.910	Fundulus_heteroclitus
ENSXCOG00000003003	-	63	67.910	ENSGMOG00000019941	rbm15	100	67.910	Gadus_morhua
ENSXCOG00000003003	-	86	53.715	ENSGALG00000000401	RBM15	100	52.784	Gallus_gallus
ENSXCOG00000003003	-	100	60.870	ENSGAFG00000001534	rbm15	98	60.870	Gambusia_affinis
ENSXCOG00000003003	-	100	96.014	ENSGAFG00000021611	-	96	96.014	Gambusia_affinis
ENSXCOG00000003003	-	100	60.905	ENSGACG00000007932	rbm15	99	61.137	Gasterosteus_aculeatus
ENSXCOG00000003003	-	99	71.901	ENSGACG00000001022	-	99	71.901	Gasterosteus_aculeatus
ENSXCOG00000003003	-	86	53.365	ENSGAGG00000012252	RBM15	100	53.429	Gopherus_agassizii
ENSXCOG00000003003	-	99	54.448	ENSGGOG00000003655	RBM15	93	56.358	Gorilla_gorilla
ENSXCOG00000003003	-	100	60.686	ENSHBUG00000022227	rbm15	100	60.914	Haplochromis_burtoni
ENSXCOG00000003003	-	100	73.443	ENSHBUG00000003220	-	100	73.561	Haplochromis_burtoni
ENSXCOG00000003003	-	99	53.805	ENSHGLG00000014811	RBM15	95	55.987	Heterocephalus_glaber_female
ENSXCOG00000003003	-	99	53.805	ENSHGLG00100017137	RBM15	95	55.987	Heterocephalus_glaber_male
ENSXCOG00000003003	-	100	60.517	ENSHCOG00000005229	RBM15	100	60.870	Hippocampus_comes
ENSXCOG00000003003	-	100	60.652	ENSHCOG00000004048	rbm15	100	60.652	Hippocampus_comes
ENSXCOG00000003003	-	100	61.627	ENSIPUG00000004415	RBM15	100	62.113	Ictalurus_punctatus
ENSXCOG00000003003	-	99	53.854	ENSSTOG00000026597	RBM15	95	56.358	Ictidomys_tridecemlineatus
ENSXCOG00000003003	-	99	54.487	ENSJJAG00000021795	Rbm15	95	56.223	Jaculus_jaculus
ENSXCOG00000003003	-	100	61.672	ENSKMAG00000017681	rbm15	100	61.789	Kryptolebias_marmoratus
ENSXCOG00000003003	-	100	70.060	ENSKMAG00000021291	-	99	70.609	Kryptolebias_marmoratus
ENSXCOG00000003003	-	96	70.874	ENSLBEG00000013105	-	100	70.874	Labrus_bergylta
ENSXCOG00000003003	-	100	62.081	ENSLBEG00000008274	rbm15	100	62.240	Labrus_bergylta
ENSXCOG00000003003	-	100	59.170	ENSLACG00000018372	RBM15	100	59.862	Latimeria_chalumnae
ENSXCOG00000003003	-	100	62.273	ENSLOCG00000017940	rbm15	100	63.068	Lepisosteus_oculatus
ENSXCOG00000003003	-	99	53.921	ENSLAFG00000012897	RBM15	95	56.432	Loxodonta_africana
ENSXCOG00000003003	-	99	53.921	ENSMFAG00000029929	RBM15	94	56.048	Macaca_fascicularis
ENSXCOG00000003003	-	99	53.921	ENSMMUG00000015020	RBM15	94	56.048	Macaca_mulatta
ENSXCOG00000003003	-	99	53.921	ENSMNEG00000045235	RBM15	94	56.048	Macaca_nemestrina
ENSXCOG00000003003	-	99	53.813	ENSMLEG00000035727	RBM15	93	55.940	Mandrillus_leucophaeus
ENSXCOG00000003003	-	100	61.021	ENSMAMG00000010732	rbm15	100	61.253	Mastacembelus_armatus
ENSXCOG00000003003	-	96	70.084	ENSMAMG00000023921	-	100	70.688	Mastacembelus_armatus
ENSXCOG00000003003	-	100	60.964	ENSMZEG00005006595	rbm15	100	61.194	Maylandia_zebra
ENSXCOG00000003003	-	99	73.388	ENSMZEG00005010876	-	98	73.388	Maylandia_zebra
ENSXCOG00000003003	-	99	53.383	ENSMAUG00000007198	Rbm15	95	55.400	Mesocricetus_auratus
ENSXCOG00000003003	-	99	53.970	ENSMICG00000005255	RBM15	95	55.940	Microcebus_murinus
ENSXCOG00000003003	-	99	53.491	ENSMOCG00000013142	Rbm15	95	55.351	Microtus_ochrogaster
ENSXCOG00000003003	-	100	60.694	ENSMMOG00000002357	rbm15	100	60.441	Mola_mola
ENSXCOG00000003003	-	100	67.060	ENSMMOG00000021778	-	100	67.414	Mola_mola
ENSXCOG00000003003	-	100	61.182	ENSMALG00000019648	rbm15	100	61.298	Monopterus_albus
ENSXCOG00000003003	-	100	69.123	ENSMALG00000017867	-	100	68.772	Monopterus_albus
ENSXCOG00000003003	-	99	53.383	MGP_CAROLIEiJ_G0025501	Rbm15	95	55.113	Mus_caroli
ENSXCOG00000003003	-	99	53.383	ENSMUSG00000048109	Rbm15	95	55.113	Mus_musculus
ENSXCOG00000003003	-	99	53.383	MGP_PahariEiJ_G0026947	Rbm15	95	55.076	Mus_pahari
ENSXCOG00000003003	-	99	53.383	MGP_SPRETEiJ_G0026451	Rbm15	95	55.113	Mus_spretus
ENSXCOG00000003003	-	99	53.961	ENSMPUG00000003822	RBM15	94	56.142	Mustela_putorius_furo
ENSXCOG00000003003	-	99	53.888	ENSMLUG00000007169	RBM15	94	56.803	Myotis_lucifugus
ENSXCOG00000003003	-	99	53.747	ENSNGAG00000011394	Rbm15	95	55.927	Nannospalax_galili
ENSXCOG00000003003	-	100	60.800	ENSNBRG00000003947	rbm15	100	61.029	Neolamprologus_brichardi
ENSXCOG00000003003	-	100	73.450	ENSNBRG00000005460	-	100	73.567	Neolamprologus_brichardi
ENSXCOG00000003003	-	100	60.800	ENSNBRG00000008870	rbm15	100	61.029	Neolamprologus_brichardi
ENSXCOG00000003003	-	99	54.448	ENSNLEG00000003601	RBM15	93	56.358	Nomascus_leucogenys
ENSXCOG00000003003	-	99	53.669	ENSMEUG00000015940	RBM15	93	55.870	Notamacropus_eugenii
ENSXCOG00000003003	-	100	53.362	ENSODEG00000019343	RBM15	100	55.961	Octodon_degus
ENSXCOG00000003003	-	100	61.440	ENSONIG00000002532	rbm15	100	61.672	Oreochromis_niloticus
ENSXCOG00000003003	-	96	74.241	ENSONIG00000018955	-	100	74.241	Oreochromis_niloticus
ENSXCOG00000003003	-	99	54.234	ENSOCUG00000002434	RBM15	94	56.250	Oryctolagus_cuniculus
ENSXCOG00000003003	-	100	61.494	ENSORLG00000006197	rbm15	100	61.610	Oryzias_latipes
ENSXCOG00000003003	-	100	70.720	ENSORLG00000000433	-	99	70.956	Oryzias_latipes
ENSXCOG00000003003	-	100	61.144	ENSORLG00020011223	rbm15	100	61.377	Oryzias_latipes_hni
ENSXCOG00000003003	-	100	70.331	ENSORLG00020008048	-	100	70.567	Oryzias_latipes_hni
ENSXCOG00000003003	-	100	70.588	ENSORLG00015004063	-	100	70.941	Oryzias_latipes_hsok
ENSXCOG00000003003	-	100	61.610	ENSORLG00015003078	rbm15	100	61.727	Oryzias_latipes_hsok
ENSXCOG00000003003	-	100	69.431	ENSOMEG00000014662	-	100	69.787	Oryzias_melastigma
ENSXCOG00000003003	-	100	60.789	ENSOMEG00000020683	rbm15	100	60.905	Oryzias_melastigma
ENSXCOG00000003003	-	100	55.102	ENSOGAG00000009182	RBM15	100	56.043	Otolemur_garnettii
ENSXCOG00000003003	-	99	54.077	ENSOARG00000019430	RBM15	93	55.987	Ovis_aries
ENSXCOG00000003003	-	99	54.292	ENSPPAG00000041967	RBM15	93	56.203	Pan_paniscus
ENSXCOG00000003003	-	99	54.176	ENSPPRG00000013347	RBM15	94	56.142	Panthera_pardus
ENSXCOG00000003003	-	99	55.361	ENSPTIG00000010318	RBM15	94	56.446	Panthera_tigris_altaica
ENSXCOG00000003003	-	99	54.292	ENSPTRG00000001074	RBM15	94	56.156	Pan_troglodytes
ENSXCOG00000003003	-	99	53.813	ENSPANG00000020891	RBM15	94	55.940	Papio_anubis
ENSXCOG00000003003	-	85	62.636	ENSPKIG00000013584	rbm15	92	61.478	Paramormyrops_kingsleyae
ENSXCOG00000003003	-	100	63.860	ENSPKIG00000003067	-	100	63.860	Paramormyrops_kingsleyae
ENSXCOG00000003003	-	58	54.104	ENSPSIG00000001607	RBM15	100	55.224	Pelodiscus_sinensis
ENSXCOG00000003003	-	100	70.036	ENSPMGG00000017642	-	100	71.174	Periophthalmus_magnuspinnatus
ENSXCOG00000003003	-	100	61.047	ENSPMGG00000016039	rbm15	100	61.279	Periophthalmus_magnuspinnatus
ENSXCOG00000003003	-	99	53.125	ENSPEMG00000000014	Rbm15	95	54.930	Peromyscus_maniculatus_bairdii
ENSXCOG00000003003	-	86	57.855	ENSPCIG00000003458	RBM15	94	55.615	Phascolarctos_cinereus
ENSXCOG00000003003	-	99	59.953	ENSPFOG00000012754	rbm15	97	59.953	Poecilia_formosa
ENSXCOG00000003003	-	100	61.066	ENSPLAG00000003560	rbm15	100	61.066	Poecilia_latipinna
ENSXCOG00000003003	-	100	96.860	ENSPLAG00000015343	-	100	96.860	Poecilia_latipinna
ENSXCOG00000003003	-	100	61.021	ENSPMEG00000002049	rbm15	100	61.021	Poecilia_mexicana
ENSXCOG00000003003	-	100	96.739	ENSPMEG00000001923	-	100	96.739	Poecilia_mexicana
ENSXCOG00000003003	-	100	60.834	ENSPREG00000014581	rbm15	100	60.834	Poecilia_reticulata
ENSXCOG00000003003	-	100	96.981	ENSPREG00000004167	-	100	96.981	Poecilia_reticulata
ENSXCOG00000003003	-	65	44.308	ENSPPYG00000015734	-	99	44.308	Pongo_abelii
ENSXCOG00000003003	-	99	54.077	ENSPPYG00000001051	RBM15	94	56.048	Pongo_abelii
ENSXCOG00000003003	-	68	55.255	ENSPCAG00000006329	RBM15	63	57.827	Procavia_capensis
ENSXCOG00000003003	-	99	54.332	ENSPCOG00000019767	RBM15	94	56.237	Propithecus_coquereli
ENSXCOG00000003003	-	99	54.234	ENSPVAG00000007193	RBM15	93	56.142	Pteropus_vampyrus
ENSXCOG00000003003	-	100	60.845	ENSPNYG00000005143	rbm15	100	60.845	Pundamilia_nyererei
ENSXCOG00000003003	-	100	73.333	ENSPNYG00000007434	-	100	73.450	Pundamilia_nyererei
ENSXCOG00000003003	-	100	62.959	ENSPNAG00000007496	rbm15	100	63.678	Pygocentrus_nattereri
ENSXCOG00000003003	-	99	53.169	ENSRNOG00000047499	Rbm15	95	55.184	Rattus_norvegicus
ENSXCOG00000003003	-	99	53.921	ENSRBIG00000044261	RBM15	94	55.832	Rhinopithecus_bieti
ENSXCOG00000003003	-	99	53.921	ENSRROG00000045519	RBM15	94	55.832	Rhinopithecus_roxellana
ENSXCOG00000003003	-	99	53.648	ENSSBOG00000021394	RBM15	94	55.879	Saimiri_boliviensis_boliviensis
ENSXCOG00000003003	-	100	72.365	ENSSMAG00000000431	-	99	72.600	Scophthalmus_maximus
ENSXCOG00000003003	-	100	61.839	ENSSMAG00000019106	rbm15	100	61.938	Scophthalmus_maximus
ENSXCOG00000003003	-	100	74.942	ENSSDUG00000009424	-	100	75.291	Seriola_dumerili
ENSXCOG00000003003	-	100	61.253	ENSSDUG00000008769	rbm15	100	61.485	Seriola_dumerili
ENSXCOG00000003003	-	100	75.175	ENSSLDG00000022441	-	100	75.408	Seriola_lalandi_dorsalis
ENSXCOG00000003003	-	100	61.253	ENSSLDG00000002691	rbm15	100	61.485	Seriola_lalandi_dorsalis
ENSXCOG00000003003	-	86	52.561	ENSSARG00000000360	RBM15	82	55.034	Sorex_araneus
ENSXCOG00000003003	-	100	62.009	ENSSPAG00000004965	rbm15	100	62.240	Stegastes_partitus
ENSXCOG00000003003	-	100	74.560	ENSSPAG00000007739	-	99	75.029	Stegastes_partitus
ENSXCOG00000003003	-	100	54.274	ENSSSCG00000006809	RBM15	100	56.069	Sus_scrofa
ENSXCOG00000003003	-	66	55.026	ENSTGUG00000000886	RBM15	99	56.485	Taeniopygia_guttata
ENSXCOG00000003003	-	99	67.529	ENSTRUG00000007851	-	97	67.529	Takifugu_rubripes
ENSXCOG00000003003	-	100	60.373	ENSTRUG00000002921	rbm15	100	60.511	Takifugu_rubripes
ENSXCOG00000003003	-	100	59.579	ENSTNIG00000015129	rbm15	99	59.579	Tetraodon_nigroviridis
ENSXCOG00000003003	-	99	54.506	ENSTBEG00000008339	RBM15	93	56.452	Tupaia_belangeri
ENSXCOG00000003003	-	99	53.970	ENSTTRG00000001317	RBM15	93	55.879	Tursiops_truncatus
ENSXCOG00000003003	-	100	54.274	ENSUAMG00000017330	RBM15	95	56.391	Ursus_americanus
ENSXCOG00000003003	-	99	54.069	ENSUMAG00000013623	RBM15	94	56.250	Ursus_maritimus
ENSXCOG00000003003	-	99	54.654	ENSVVUG00000002929	RBM15	94	55.724	Vulpes_vulpes
ENSXCOG00000003003	-	100	53.165	ENSXETG00000002029	rbm15	100	53.326	Xenopus_tropicalis
ENSXCOG00000003003	-	100	60.905	ENSXMAG00000020192	rbm15	100	60.905	Xiphophorus_maculatus
ENSXCOG00000003003	-	100	99.034	ENSXMAG00000009062	-	100	99.034	Xiphophorus_maculatus