EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003042 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa01f05|fb21h03|fc23h10|hm:zeh0114|im:6968518|wu:fa01f05|wu:fb21h03|wu:fc23h10
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 21019 bases
Position: chrKQ557202.1:24742432-24763450
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003879	Ago_hook	PF10427.9	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000003923	-	4785	-	ENSXCOP00000003879	1595 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003042	-	87	39.324	ENSG00000100354	TNRC6B	72	49.744	Homo_sapiens
ENSXCOG00000003042	-	98	38.602	ENSANAG00000035042	TNRC6B	72	49.872	Aotus_nancymaae
ENSXCOG00000003042	-	97	51.679	ENSAMXG00000008707	tnrc6b	84	51.977	Astyanax_mexicanus
ENSXCOG00000003042	-	87	50.089	ENSCJAG00000002732	TNRC6B	72	50.000	Callithrix_jacchus
ENSXCOG00000003042	-	98	38.000	ENSCCAG00000019912	TNRC6B	71	48.010	Cebus_capucinus
ENSXCOG00000003042	-	98	38.129	ENSCATG00000029291	TNRC6B	71	48.849	Cercocebus_atys
ENSXCOG00000003042	-	97	48.877	ENSCPBG00000022932	TNRC6B	59	46.078	Chrysemys_picta_bellii
ENSXCOG00000003042	-	52	50.631	ENSCANG00000030776	TNRC6B	72	49.872	Colobus_angolensis_palliatus
ENSXCOG00000003042	-	98	39.258	ENSDNOG00000012744	TNRC6B	74	47.122	Dasypus_novemcinctus
ENSXCOG00000003042	-	98	38.363	ENSGGOG00000008444	TNRC6B	72	49.616	Gorilla_gorilla
ENSXCOG00000003042	-	98	38.163	ENSHGLG00000009306	TNRC6B	59	46.064	Heterocephalus_glaber_female
ENSXCOG00000003042	-	97	52.557	ENSIPUG00000001515	tnrc6b	84	52.784	Ictalurus_punctatus
ENSXCOG00000003042	-	53	41.242	ENSLACG00000000628	-	55	41.333	Latimeria_chalumnae
ENSXCOG00000003042	-	53	50.341	ENSLAFG00000014473	TNRC6B	87	49.330	Loxodonta_africana
ENSXCOG00000003042	-	98	38.218	ENSMFAG00000003862	TNRC6B	71	48.849	Macaca_fascicularis
ENSXCOG00000003042	-	52	50.865	ENSMMUG00000021345	TNRC6B	72	49.872	Macaca_mulatta
ENSXCOG00000003042	-	98	38.129	ENSMLEG00000041780	TNRC6B	72	49.872	Mandrillus_leucophaeus
ENSXCOG00000003042	-	98	39.200	ENSMICG00000014056	TNRC6B	72	50.512	Microcebus_murinus
ENSXCOG00000003042	-	64	70.400	ENSMMOG00000002799	si:dkey-217f16.6	60	70.400	Mola_mola
ENSXCOG00000003042	-	82	41.903	ENSMUSG00000047888	Tnrc6b	78	49.369	Mus_musculus
ENSXCOG00000003042	-	97	47.087	ENSMPUG00000016442	TNRC6B	50	43.693	Mustela_putorius_furo
ENSXCOG00000003042	-	97	38.740	ENSPPAG00000028514	TNRC6B	72	49.872	Pan_paniscus
ENSXCOG00000003042	-	97	37.204	ENSPPRG00000017741	TNRC6B	72	50.128	Panthera_pardus
ENSXCOG00000003042	-	96	35.538	ENSPTIG00000022064	TNRC6B	69	47.952	Panthera_tigris_altaica
ENSXCOG00000003042	-	98	38.765	ENSPTRG00000047826	TNRC6B	72	49.872	Pan_troglodytes
ENSXCOG00000003042	-	52	42.531	ENSPANG00000009271	TNRC6B	69	54.146	Papio_anubis
ENSXCOG00000003042	-	98	79.536	ENSPFOG00000006033	-	59	90.248	Poecilia_formosa
ENSXCOG00000003042	-	98	90.389	ENSPLAG00000001418	-	86	90.829	Poecilia_latipinna
ENSXCOG00000003042	-	90	94.425	ENSPMEG00000006371	-	84	94.425	Poecilia_mexicana
ENSXCOG00000003042	-	98	38.915	ENSPCOG00000020790	TNRC6B	72	50.128	Propithecus_coquereli
ENSXCOG00000003042	-	71	50.551	ENSPVAG00000004975	TNRC6B	51	50.206	Pteropus_vampyrus
ENSXCOG00000003042	-	97	52.026	ENSPNAG00000011713	tnrc6b	83	51.722	Pygocentrus_nattereri
ENSXCOG00000003042	-	52	50.631	ENSRBIG00000035576	TNRC6B	73	49.872	Rhinopithecus_bieti
ENSXCOG00000003042	-	52	50.631	ENSRROG00000031135	TNRC6B	72	49.872	Rhinopithecus_roxellana
ENSXCOG00000003042	-	65	31.086	ENSSBOG00000029743	TNRC6B	74	49.744	Saimiri_boliviensis_boliviensis