EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000003084 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
17945 bases
Position
chrKQ557202.1:24804007-24821951
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000003952GTP_EFTUPF00009.271.3e-3611
ENSXCOP00000003948GTP_EFTUPF00009.271.8e-3611
ENSXCOP00000003960GTP_EFTUPF00009.272e-3611
ENSXCOP00000003955GTP_EFTUPF00009.272.1e-3611
ENSXCOP00000003952GTP_EFTU_D3PF03143.177.4e-3211
ENSXCOP00000003948GTP_EFTU_D3PF03143.179.7e-3211
ENSXCOP00000003960GTP_EFTU_D3PF03143.171e-3111
ENSXCOP00000003955GTP_EFTU_D3PF03143.171.1e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000004004-1710-ENSXCOP00000003960569 (aa)--
ENSXCOT00000003992-1665-ENSXCOP00000003948554 (aa)--
ENSXCOT00000003999-1737-ENSXCOP00000003955578 (aa)--
ENSXCOT00000003996-1485-ENSXCOP00000003952494 (aa)--
Gene Model
Click here to download ENSXCOG00000003084's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003084's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000003084-9536.791ENSXCOG00000005323hbs1l6240.706
ENSXCOG00000003084-9684.874ENSXCOG00000016099gspt1l9784.874
ENSXCOG00000003084-8636.961ENSXCOG00000012296si:dkey-37o8.19736.878
ENSXCOG00000003084-8637.698ENSXCOG00000001542-9837.613
ENSXCOG00000003084-8637.557ENSXCOG00000011374EEF1A19537.472
ENSXCOG00000003084-8637.330ENSXCOG00000013395-9537.246
ENSXCOG00000003084-7736.111ENSXCOG00000013465eef1a1b9536.111
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000003084-9885.010ENSG00000103342GSPT19983.936Homo_sapiens
ENSXCOG00000003084-9886.789ENSAPOG00000002524gspt1l10080.690Acanthochromis_polyacanthus
ENSXCOG00000003084-10090.444ENSAPOG00000004594-9992.814Acanthochromis_polyacanthus
ENSXCOG00000003084-9983.433ENSAMEG00000009589GSPT19583.433Ailuropoda_melanoleuca
ENSXCOG00000003084-8889.726ENSACIG00000006643GSPT19987.475Amphilophus_citrinellus
ENSXCOG00000003084-8793.349ENSACIG00000007028-9987.780Amphilophus_citrinellus
ENSXCOG00000003084-9886.992ENSAOCG00000016342gspt1l9987.885Amphiprion_ocellaris
ENSXCOG00000003084-10090.444ENSAOCG00000020972-10090.444Amphiprion_ocellaris
ENSXCOG00000003084-8992.922ENSAPEG00000003359-10087.230Amphiprion_percula
ENSXCOG00000003084-9887.551ENSAPEG00000010261gspt1l10082.056Amphiprion_percula
ENSXCOG00000003084-9885.569ENSATEG00000007769gspt1l10079.828Anabas_testudineus
ENSXCOG00000003084-10089.619ENSATEG00000009194GSPT110089.249Anabas_testudineus
ENSXCOG00000003084-8989.189ENSACAG00000003979GSPT18588.989Anolis_carolinensis
ENSXCOG00000003084-9474.132ENSANAG00000036504GSPT19074.132Aotus_nancymaae
ENSXCOG00000003084-9886.939ENSACLG00000011643gspt1l10081.002Astatotilapia_calliptera
ENSXCOG00000003084-10090.290ENSACLG00000017598-10088.927Astatotilapia_calliptera
ENSXCOG00000003084-9885.947ENSAMXG00000002781gspt1l8680.279Astyanax_mexicanus
ENSXCOG00000003084-10083.713ENSAMXG00000008638gspt110081.195Astyanax_mexicanus
ENSXCOG00000003084-9884.867ENSBTAG00000003577GSPT19772.581Bos_taurus
ENSXCOG00000003084-9884.805ENSCJAG00000018191GSPT19774.874Callithrix_jacchus
ENSXCOG00000003084-9983.534ENSCAFG00000018856GSPT19583.400Canis_familiaris
ENSXCOG00000003084-9981.744ENSCAFG00020024250GSPT19181.911Canis_lupus_dingo
ENSXCOG00000003084-9983.800ENSCHIG00000009274GSPT19875.418Capra_hircus
ENSXCOG00000003084-9967.470ENSTSYG00000036050-8367.470Carlito_syrichta
ENSXCOG00000003084-9983.936ENSTSYG00000013812-9583.936Carlito_syrichta
ENSXCOG00000003084-8275.616ENSCAPG00000014454GSPT18775.616Cavia_aperea
ENSXCOG00000003084-9982.932ENSCPOG00000009381GSPT18982.932Cavia_porcellus
ENSXCOG00000003084-9875.359ENSCCAG00000036663-9375.359Cebus_capucinus
ENSXCOG00000003084-9979.234ENSCATG00000025774GSPT19669.481Cercocebus_atys
ENSXCOG00000003084-9883.984ENSCLAG00000011772GSPT19983.984Chinchilla_lanigera
ENSXCOG00000003084-9983.936ENSCSAG00000008244GSPT19773.021Chlorocebus_sabaeus
ENSXCOG00000003084-9963.800ENSCHOG00000003850GSPT18555.628Choloepus_hoffmanni
ENSXCOG00000003084-9884.189ENSCPBG00000020430GSPT19880.917Chrysemys_picta_bellii
ENSXCOG00000003084-9657.542ENSCSAVG00000010206-9958.333Ciona_savignyi
ENSXCOG00000003084-9967.404ENSCANG00000035684GSPT19967.404Colobus_angolensis_palliatus
ENSXCOG00000003084-9884.805ENSCGRG00001009583Gspt19884.805Cricetulus_griseus_chok1gshd
ENSXCOG00000003084-9983.735ENSCGRG00000002048Gspt19983.735Cricetulus_griseus_crigri
ENSXCOG00000003084-10087.737ENSCSEG00000019708GSPT110087.372Cynoglossus_semilaevis
ENSXCOG00000003084-10092.491ENSCVAG00000000869GSPT110092.491Cyprinodon_variegatus
ENSXCOG00000003084-10066.782ENSCVAG00000016392-10064.921Cyprinodon_variegatus
ENSXCOG00000003084-9887.169ENSDARG00000098627gspt1l10080.450Danio_rerio
ENSXCOG00000003084-10081.282ENSDARG00000031048gspt110079.417Danio_rerio
ENSXCOG00000003084-9983.936ENSDNOG00000004608GSPT19983.936Dasypus_novemcinctus
ENSXCOG00000003084-9983.534ENSDORG00000025038Gspt19983.534Dipodomys_ordii
ENSXCOG00000003084-9785.507ENSETEG00000018249GSPT18977.312Echinops_telfairi
ENSXCOG00000003084-9983.534ENSEASG00005011497GSPT19772.552Equus_asinus_asinus
ENSXCOG00000003084-9785.093ENSECAG00000021195GSPT19985.093Equus_caballus
ENSXCOG00000003084-9974.096ENSEEUG00000008851GSPT19069.056Erinaceus_europaeus
ENSXCOG00000003084-9887.755ENSELUG00000023492gspt1l10080.551Esox_lucius
ENSXCOG00000003084-9589.873ENSELUG00000019323-9982.734Esox_lucius
ENSXCOG00000003084-9983.936ENSFCAG00000022281GSPT19773.108Felis_catus
ENSXCOG00000003084-8989.391ENSFALG00000003880GSPT17984.600Ficedula_albicollis
ENSXCOG00000003084-9982.731ENSFDAG00000008253GSPT19682.731Fukomys_damarensis
ENSXCOG00000003084-10082.812ENSFHEG00000009090gspt1l10082.373Fundulus_heteroclitus
ENSXCOG00000003084-7590.741ENSGMOG00000009933-8872.727Gadus_morhua
ENSXCOG00000003084-10083.333ENSGMOG00000013056GSPT110082.492Gadus_morhua
ENSXCOG00000003084-9884.805ENSGALG00000039500GSPT29973.203Gallus_gallus
ENSXCOG00000003084-9886.299ENSGAFG00000005676gspt1l10080.803Gambusia_affinis
ENSXCOG00000003084-8990.745ENSGAFG00000020793-9991.224Gambusia_affinis
ENSXCOG00000003084-9190.487ENSGACG00000004324gspt1l10079.102Gasterosteus_aculeatus
ENSXCOG00000003084-10086.949ENSGACG00000004490-10085.254Gasterosteus_aculeatus
ENSXCOG00000003084-9982.932ENSGAGG00000016315GSPT19873.052Gopherus_agassizii
ENSXCOG00000003084-9885.010ENSGGOG00000004071GSPT19477.544Gorilla_gorilla
ENSXCOG00000003084-8793.287ENSHBUG00000006257gspt1l10093.287Haplochromis_burtoni
ENSXCOG00000003084-10090.460ENSHBUG00000001538GSPT110088.985Haplochromis_burtoni
ENSXCOG00000003084-9883.984ENSHGLG00000010520-9883.984Heterocephalus_glaber_female
ENSXCOG00000003084-9975.000ENSHGLG00000012034-9168.496Heterocephalus_glaber_female
ENSXCOG00000003084-9972.581ENSHGLG00100010030-9766.608Heterocephalus_glaber_male
ENSXCOG00000003084-9883.984ENSHGLG00100015621-9883.984Heterocephalus_glaber_male
ENSXCOG00000003084-10085.495ENSHCOG00000015286GSPT110084.497Hippocampus_comes
ENSXCOG00000003084-8993.182ENSHCOG00000016899gspt1l10080.345Hippocampus_comes
ENSXCOG00000003084-10083.957ENSIPUG00000011358Gspt110082.888Ictalurus_punctatus
ENSXCOG00000003084-8693.677ENSIPUG00000001655Gspt110079.130Ictalurus_punctatus
ENSXCOG00000003084-9983.936ENSSTOG00000015406GSPT19983.936Ictidomys_tridecemlineatus
ENSXCOG00000003084-9983.534ENSJJAG00000015530Gspt19773.366Jaculus_jaculus
ENSXCOG00000003084-10087.925ENSKMAG00000021919GSPT110089.286Kryptolebias_marmoratus
ENSXCOG00000003084-9887.398ENSKMAG00000006311-10082.230Kryptolebias_marmoratus
ENSXCOG00000003084-10088.927ENSLBEG00000001128GSPT110088.927Labrus_bergylta
ENSXCOG00000003084-9886.094ENSLBEG00000006458gspt1l10080.454Labrus_bergylta
ENSXCOG00000003084-8973.243ENSLACG00000001700GSPT19469.325Latimeria_chalumnae
ENSXCOG00000003084-10083.045ENSLOCG00000007431gspt110082.322Lepisosteus_oculatus
ENSXCOG00000003084-9983.936ENSLAFG00000032278GSPT19776.696Loxodonta_africana
ENSXCOG00000003084-9885.010ENSMFAG00000037675GSPT19079.422Macaca_fascicularis
ENSXCOG00000003084-9885.010ENSMMUG00000023178GSPT19885.010Macaca_mulatta
ENSXCOG00000003084-9885.010ENSMNEG00000032993GSPT19983.936Macaca_nemestrina
ENSXCOG00000003084-9983.936ENSMLEG00000028669GSPT19683.936Mandrillus_leucophaeus
ENSXCOG00000003084-10088.285ENSMAMG00000004326GSPT110088.964Mastacembelus_armatus
ENSXCOG00000003084-10082.069ENSMAMG00000002821gspt1l10081.002Mastacembelus_armatus
ENSXCOG00000003084-10090.119ENSMZEG00005007132-10088.756Maylandia_zebra
ENSXCOG00000003084-9886.939ENSMZEG00005022024gspt1l10081.565Maylandia_zebra
ENSXCOG00000003084-9884.805ENSMGAG00000000878GSPT19384.805Meleagris_gallopavo
ENSXCOG00000003084-6780.119ENSMAUG00000000551Gspt19666.225Mesocricetus_auratus
ENSXCOG00000003084-9884.805ENSMICG00000014137GSPT18978.330Microcebus_murinus
ENSXCOG00000003084-9884.600ENSMOCG00000019604Gspt19875.168Microtus_ochrogaster
ENSXCOG00000003084-9886.094ENSMMOG00000009646gspt1l9493.072Mola_mola
ENSXCOG00000003084-8995.011ENSMMOG00000003725GSPT19094.582Mola_mola
ENSXCOG00000003084-8974.831ENSMODG00000023082-9571.573Monodelphis_domestica
ENSXCOG00000003084-9983.936ENSMODG00000004728-9876.481Monodelphis_domestica
ENSXCOG00000003084-10089.078ENSMALG00000009500GSPT110088.737Monopterus_albus
ENSXCOG00000003084-9886.410ENSMALG00000003550-10080.522Monopterus_albus
ENSXCOG00000003084-9884.600MGP_CAROLIEiJ_G0020458Gspt110071.318Mus_caroli
ENSXCOG00000003084-9885.010ENSMUSG00000062203Gspt19972.093Mus_musculus
ENSXCOG00000003084-9884.805MGP_PahariEiJ_G0016165Gspt110072.093Mus_pahari
ENSXCOG00000003084-9885.010MGP_SPRETEiJ_G0021353Gspt110072.093Mus_spretus
ENSXCOG00000003084-9982.903ENSMPUG00000014504GSPT19582.903Mustela_putorius_furo
ENSXCOG00000003084-9885.216ENSMLUG00000000792GSPT19385.216Myotis_lucifugus
ENSXCOG00000003084-9983.333ENSNGAG00000023220Gspt19772.934Nannospalax_galili
ENSXCOG00000003084-10090.290ENSNBRG00000002803GSPT110088.756Neolamprologus_brichardi
ENSXCOG00000003084-9885.010ENSNLEG00000010199GSPT19983.936Nomascus_leucogenys
ENSXCOG00000003084-8665.493ENSMEUG00000015169-8058.348Notamacropus_eugenii
ENSXCOG00000003084-7865.678ENSMEUG00000006697-7065.678Notamacropus_eugenii
ENSXCOG00000003084-8988.939ENSOPRG00000014219GSPT16389.165Ochotona_princeps
ENSXCOG00000003084-9883.984ENSODEG00000002248-9883.984Octodon_degus
ENSXCOG00000003084-8568.925ENSODEG00000011524-9868.925Octodon_degus
ENSXCOG00000003084-10090.460ENSONIG00000019754-10090.460Oreochromis_niloticus
ENSXCOG00000003084-9887.551ENSONIG00000003456gspt1l10081.109Oreochromis_niloticus
ENSXCOG00000003084-7890.885ENSOANG00000009409GSPT110090.885Ornithorhynchus_anatinus
ENSXCOG00000003084-9983.534ENSOCUG00000004759GSPT19772.213Oryctolagus_cuniculus
ENSXCOG00000003084-10088.095ENSORLG00000002867-10089.796Oryzias_latipes
ENSXCOG00000003084-10082.548ENSORLG00000026597gspt1l10081.469Oryzias_latipes
ENSXCOG00000003084-10082.548ENSORLG00020016364gspt1l10081.469Oryzias_latipes_hni
ENSXCOG00000003084-10088.795ENSORLG00020006749-10090.085Oryzias_latipes_hni
ENSXCOG00000003084-10082.897ENSORLG00015008971gspt1l10081.469Oryzias_latipes_hsok
ENSXCOG00000003084-10090.785ENSORLG00015005515-10090.963Oryzias_latipes_hsok
ENSXCOG00000003084-10092.188ENSOMEG00000008108-10090.956Oryzias_melastigma
ENSXCOG00000003084-9887.037ENSOMEG00000002739gspt1l10080.488Oryzias_melastigma
ENSXCOG00000003084-9982.937ENSOGAG00000007083GSPT19076.389Otolemur_garnettii
ENSXCOG00000003084-9983.600ENSOARG00000007088GSPT19772.859Ovis_aries
ENSXCOG00000003084-5675.309ENSPPAG00000028454-8375.309Pan_paniscus
ENSXCOG00000003084-9983.936ENSPPRG00000005042GSPT19983.936Panthera_pardus
ENSXCOG00000003084-9983.936ENSPTIG00000020265GSPT19983.936Panthera_tigris_altaica
ENSXCOG00000003084-9981.928ENSPTRG00000007779-9481.928Pan_troglodytes
ENSXCOG00000003084-9885.010ENSPANG00000007630GSPT19773.226Papio_anubis
ENSXCOG00000003084-9889.300ENSPKIG00000022644gspt110082.812Paramormyrops_kingsleyae
ENSXCOG00000003084-5191.765ENSPKIG00000020492gspt1l6572.123Paramormyrops_kingsleyae
ENSXCOG00000003084-9982.530ENSPSIG00000008275GSPT19582.530Pelodiscus_sinensis
ENSXCOG00000003084-10087.698ENSPMGG00000022247GSPT110089.418Periophthalmus_magnuspinnatus
ENSXCOG00000003084-9188.000ENSPMGG00000003007gspt1l9882.759Periophthalmus_magnuspinnatus
ENSXCOG00000003084-9983.936ENSPEMG00000012896Gspt19774.295Peromyscus_maniculatus_bairdii
ENSXCOG00000003084-8978.959ENSPCIG00000005432-9765.309Phascolarctos_cinereus
ENSXCOG00000003084-8988.036ENSPCIG00000007435-9870.692Phascolarctos_cinereus
ENSXCOG00000003084-8989.569ENSPCIG00000026776-9489.391Phascolarctos_cinereus
ENSXCOG00000003084-9886.503ENSPFOG00000016035gspt1l10080.416Poecilia_formosa
ENSXCOG00000003084-9986.120ENSPFOG00000005224-10089.951Poecilia_formosa
ENSXCOG00000003084-6682.371ENSPLAG00000007443GSPT16782.371Poecilia_latipinna
ENSXCOG00000003084-8794.152ENSPLAG00000001492-9694.152Poecilia_latipinna
ENSXCOG00000003084-10094.881ENSPMEG00000007020-10094.881Poecilia_mexicana
ENSXCOG00000003084-9886.503ENSPMEG00000022359gspt1l10080.977Poecilia_mexicana
ENSXCOG00000003084-9296.923ENSPREG00000016668-10097.325Poecilia_reticulata
ENSXCOG00000003084-8792.111ENSPREG00000008023gspt1l8980.106Poecilia_reticulata
ENSXCOG00000003084-9983.936ENSPPYG00000007114GSPT18972.801Pongo_abelii
ENSXCOG00000003084-9873.684ENSPCAG00000011379GSPT18663.844Procavia_capensis
ENSXCOG00000003084-9983.936ENSPCOG00000013204GSPT19980.242Propithecus_coquereli
ENSXCOG00000003084-9983.936ENSPVAG00000005009GSPT18772.552Pteropus_vampyrus
ENSXCOG00000003084-9886.735ENSPNYG00000010474gspt1l10081.002Pundamilia_nyererei
ENSXCOG00000003084-10090.119ENSPNYG00000002903-9994.000Pundamilia_nyererei
ENSXCOG00000003084-9886.558ENSPNAG00000002605gspt1l10082.137Pygocentrus_nattereri
ENSXCOG00000003084-10079.896ENSPNAG00000011819gspt110079.478Pygocentrus_nattereri
ENSXCOG00000003084-9983.567ENSRNOG00000046271LOC1009116859772.565Rattus_norvegicus
ENSXCOG00000003084-9983.936ENSRBIG00000039784GSPT19683.936Rhinopithecus_bieti
ENSXCOG00000003084-9983.936ENSRROG00000031350GSPT19983.936Rhinopithecus_roxellana
ENSXCOG00000003084-9983.735ENSSBOG00000017761GSPT19683.735Saimiri_boliviensis_boliviensis
ENSXCOG00000003084-8989.391ENSSHAG00000005908-9981.733Sarcophilus_harrisii
ENSXCOG00000003084-9485.376ENSSHAG00000002700-7289.791Sarcophilus_harrisii
ENSXCOG00000003084-9889.648ENSSFOG00015011277gspt110084.534Scleropages_formosus
ENSXCOG00000003084-9091.741ENSSFOG00015014731-10079.346Scleropages_formosus
ENSXCOG00000003084-9886.179ENSSMAG00000014782gspt1l10081.391Scophthalmus_maximus
ENSXCOG00000003084-10086.802ENSSMAG00000007886GSPT110085.618Scophthalmus_maximus
ENSXCOG00000003084-9887.117ENSSDUG00000016908gspt1l10081.850Seriola_dumerili
ENSXCOG00000003084-8797.222ENSSDUG00000008404GSPT110090.785Seriola_dumerili
ENSXCOG00000003084-10090.956ENSSLDG00000008363GSPT110090.785Seriola_lalandi_dorsalis
ENSXCOG00000003084-9887.117ENSSLDG00000009000gspt1l10081.850Seriola_lalandi_dorsalis
ENSXCOG00000003084-6278.135ENSSARG00000013461-6766.990Sorex_araneus
ENSXCOG00000003084-7784.921ENSSPUG00000007536GSPT16484.921Sphenodon_punctatus
ENSXCOG00000003084-10090.614ENSSPAG00000004622-10090.614Stegastes_partitus
ENSXCOG00000003084-9887.347ENSSPAG00000011542gspt1l9587.347Stegastes_partitus
ENSXCOG00000003084-8896.355ENSSPAG00000009785-10090.411Stegastes_partitus
ENSXCOG00000003084-9984.000ENSSSCG00000021118GSPT19772.625Sus_scrofa
ENSXCOG00000003084-8989.391ENSTGUG00000005103GSPT19384.600Taeniopygia_guttata
ENSXCOG00000003084-9884.458ENSTRUG00000012645gspt1l10077.797Takifugu_rubripes
ENSXCOG00000003084-8297.030ENSTRUG00000016971-9997.030Takifugu_rubripes
ENSXCOG00000003084-10083.247ENSTNIG00000012926GSPT19981.678Tetraodon_nigroviridis
ENSXCOG00000003084-9883.265ENSTNIG00000010212gspt1l9883.265Tetraodon_nigroviridis
ENSXCOG00000003084-5578.417ENSTBEG00000008873-5378.417Tupaia_belangeri
ENSXCOG00000003084-9983.800ENSTTRG00000011630GSPT18772.033Tursiops_truncatus
ENSXCOG00000003084-9981.928ENSUAMG00000004460GSPT19981.928Ursus_americanus
ENSXCOG00000003084-9983.936ENSUMAG00000004033GSPT19883.936Ursus_maritimus
ENSXCOG00000003084-9984.000ENSVPAG00000006903GSPT18084.000Vicugna_pacos
ENSXCOG00000003084-9983.534ENSVVUG00000018198GSPT19283.400Vulpes_vulpes
ENSXCOG00000003084-9977.154ENSXETG00000005540gspt19774.955Xenopus_tropicalis
ENSXCOG00000003084-10095.563ENSXMAG00000022050-10095.563Xiphophorus_maculatus
ENSXCOG00000003084-9886.503ENSXMAG00000007284gspt1l10080.662Xiphophorus_maculatus

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