EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003117 (Gene tree)
Gene ID: -
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4300 bases
Position: chrKQ557202.1:24825106-24829405
Accession: ZDB-GENE-130603-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000003965	Ribosomal_L1	PF00687.21	1.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004009	-	696	-	ENSXCOP00000003965	232 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003117	rsl1d1	63	55.102	ENSG00000171490	RSL1D1	100	59.184	Homo_sapiens
ENSXCOG00000003117	rsl1d1	100	81.757	ENSAPOG00000004544	rsl1d1	68	81.757	Acanthochromis_polyacanthus
ENSXCOG00000003117	rsl1d1	100	50.169	ENSACIG00000006608	rsl1d1	90	50.327	Amphilophus_citrinellus
ENSXCOG00000003117	rsl1d1	100	80.405	ENSAOCG00000001548	rsl1d1	67	80.405	Amphiprion_ocellaris
ENSXCOG00000003117	rsl1d1	100	80.405	ENSAPEG00000003334	rsl1d1	67	80.405	Amphiprion_percula
ENSXCOG00000003117	rsl1d1	97	73.939	ENSATEG00000009247	rsl1d1	73	73.939	Anabas_testudineus
ENSXCOG00000003117	rsl1d1	99	76.433	ENSACLG00000017535	rsl1d1	71	76.433	Astatotilapia_calliptera
ENSXCOG00000003117	rsl1d1	99	68.027	ENSAMXG00000008624	rsl1d1	68	68.027	Astyanax_mexicanus
ENSXCOG00000003117	rsl1d1	63	62.585	ENSCPBG00000004564	RSL1D1	55	61.600	Chrysemys_picta_bellii
ENSXCOG00000003117	rsl1d1	62	38.889	ENSCING00000011810	-	63	38.889	Ciona_intestinalis
ENSXCOG00000003117	rsl1d1	100	79.054	ENSCSEG00000019693	rsl1d1	66	79.054	Cynoglossus_semilaevis
ENSXCOG00000003117	rsl1d1	100	82.432	ENSCVAG00000000672	rsl1d1	66	82.432	Cyprinodon_variegatus
ENSXCOG00000003117	rsl1d1	100	70.270	ENSDARG00000055868	rsl1d1	64	70.270	Danio_rerio
ENSXCOG00000003117	rsl1d1	99	77.551	ENSELUG00000019243	rsl1d1	69	77.551	Esox_lucius
ENSXCOG00000003117	rsl1d1	100	79.730	ENSFHEG00000017235	rsl1d1	64	79.730	Fundulus_heteroclitus
ENSXCOG00000003117	rsl1d1	99	65.385	ENSGMOG00000013048	rsl1d1	86	65.385	Gadus_morhua
ENSXCOG00000003117	rsl1d1	100	90.506	ENSGAFG00000020794	rsl1d1	66	90.506	Gambusia_affinis
ENSXCOG00000003117	rsl1d1	100	71.519	ENSGACG00000004483	rsl1d1	67	71.519	Gasterosteus_aculeatus
ENSXCOG00000003117	rsl1d1	99	75.796	ENSHBUG00000001551	rsl1d1	70	75.796	Haplochromis_burtoni
ENSXCOG00000003117	rsl1d1	98	71.622	ENSHCOG00000015208	rsl1d1	69	68.790	Hippocampus_comes
ENSXCOG00000003117	rsl1d1	99	65.306	ENSIPUG00000001677	rsl1d1	65	65.306	Ictalurus_punctatus
ENSXCOG00000003117	rsl1d1	96	37.417	ENSJJAG00000012115	Rsl1d1	56	42.017	Jaculus_jaculus
ENSXCOG00000003117	rsl1d1	100	75.676	ENSKMAG00000021908	rsl1d1	67	75.676	Kryptolebias_marmoratus
ENSXCOG00000003117	rsl1d1	99	70.701	ENSLBEG00000001076	rsl1d1	68	70.701	Labrus_bergylta
ENSXCOG00000003117	rsl1d1	100	64.865	ENSLOCG00000007416	rsl1d1	56	64.865	Lepisosteus_oculatus
ENSXCOG00000003117	rsl1d1	63	55.102	ENSMMUG00000019632	RSL1D1	92	54.795	Macaca_mulatta
ENSXCOG00000003117	rsl1d1	100	79.618	ENSMAMG00000004385	rsl1d1	70	79.618	Mastacembelus_armatus
ENSXCOG00000003117	rsl1d1	99	76.433	ENSMZEG00005007150	rsl1d1	71	76.433	Maylandia_zebra
ENSXCOG00000003117	rsl1d1	100	61.392	ENSMMOG00000003730	rsl1d1	100	56.679	Mola_mola
ENSXCOG00000003117	rsl1d1	97	80.769	ENSMALG00000009531	rsl1d1	70	80.769	Monopterus_albus
ENSXCOG00000003117	rsl1d1	97	76.923	ENSNBRG00000002777	rsl1d1	70	76.923	Neolamprologus_brichardi
ENSXCOG00000003117	rsl1d1	97	75.000	ENSONIG00000019757	rsl1d1	73	75.000	Oreochromis_niloticus
ENSXCOG00000003117	rsl1d1	100	77.181	ENSORLG00000002877	rsl1d1	67	77.181	Oryzias_latipes
ENSXCOG00000003117	rsl1d1	100	77.181	ENSORLG00020006636	rsl1d1	67	77.181	Oryzias_latipes_hni
ENSXCOG00000003117	rsl1d1	100	77.852	ENSORLG00015005427	rsl1d1	67	77.852	Oryzias_latipes_hsok
ENSXCOG00000003117	rsl1d1	100	77.181	ENSOMEG00000008036	rsl1d1	65	77.181	Oryzias_melastigma
ENSXCOG00000003117	rsl1d1	100	56.688	ENSPKIG00000022687	rsl1d1	71	52.747	Paramormyrops_kingsleyae
ENSXCOG00000003117	rsl1d1	99	79.577	ENSPMGG00000022261	rsl1d1	79	79.021	Periophthalmus_magnuspinnatus
ENSXCOG00000003117	rsl1d1	90	87.342	ENSPFOG00000005017	rsl1d1	57	87.342	Poecilia_formosa
ENSXCOG00000003117	rsl1d1	100	87.975	ENSPLAG00000000482	rsl1d1	59	87.975	Poecilia_latipinna
ENSXCOG00000003117	rsl1d1	100	86.709	ENSPMEG00000007032	rsl1d1	66	86.709	Poecilia_mexicana
ENSXCOG00000003117	rsl1d1	100	84.810	ENSPREG00000016619	rsl1d1	63	84.810	Poecilia_reticulata
ENSXCOG00000003117	rsl1d1	99	36.842	ENSPCOG00000022456	RSL1D1	58	44.175	Propithecus_coquereli
ENSXCOG00000003117	rsl1d1	99	76.433	ENSPNYG00000002850	rsl1d1	71	76.433	Pundamilia_nyererei
ENSXCOG00000003117	rsl1d1	99	69.388	ENSPNAG00000011848	rsl1d1	67	69.388	Pygocentrus_nattereri
ENSXCOG00000003117	rsl1d1	78	69.595	ENSSFOG00015011354	rsl1d1	54	69.595	Scleropages_formosus
ENSXCOG00000003117	rsl1d1	96	78.710	ENSSMAG00000007957	rsl1d1	67	78.710	Scophthalmus_maximus
ENSXCOG00000003117	rsl1d1	97	80.405	ENSSDUG00000008447	rsl1d1	62	80.405	Seriola_dumerili
ENSXCOG00000003117	rsl1d1	97	77.707	ENSSLDG00000008293	rsl1d1	69	77.707	Seriola_lalandi_dorsalis
ENSXCOG00000003117	rsl1d1	100	78.378	ENSSPAG00000009755	rsl1d1	68	78.378	Stegastes_partitus
ENSXCOG00000003117	rsl1d1	64	62.838	ENSTGUG00000005174	RSL1D1	60	62.838	Taeniopygia_guttata
ENSXCOG00000003117	rsl1d1	97	69.375	ENSTRUG00000016970	rsl1d1	68	69.375	Takifugu_rubripes
ENSXCOG00000003117	rsl1d1	99	73.125	ENSTNIG00000012925	rsl1d1	69	73.125	Tetraodon_nigroviridis
ENSXCOG00000003117	rsl1d1	77	100.000	ENSXMAG00000025111	rsl1d1	53	100.000	Xiphophorus_maculatus