EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2631 bases
Position: chrKQ557225.1:35572417-35575047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004017	RVT_1	PF00078.27	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004061	-	462	-	ENSXCOP00000004017	153 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003154	-	85	46.212	ENSAPOG00000023528	-	50	46.154	Acanthochromis_polyacanthus
ENSXCOG00000003154	-	92	33.099	ENSACIG00000011711	-	62	32.857	Amphilophus_citrinellus
ENSXCOG00000003154	-	89	41.304	ENSAPEG00000007794	-	64	41.176	Amphiprion_percula
ENSXCOG00000003154	-	90	31.690	ENSACLG00000015452	-	72	31.429	Astatotilapia_calliptera
ENSXCOG00000003154	-	88	32.117	ENSACLG00000011781	-	74	31.618	Astatotilapia_calliptera
ENSXCOG00000003154	-	89	33.566	ENSCVAG00000018200	-	82	36.364	Cyprinodon_variegatus
ENSXCOG00000003154	-	91	32.000	ENSHBUG00000020518	-	59	31.293	Haplochromis_burtoni
ENSXCOG00000003154	-	91	39.860	ENSHBUG00000023310	-	63	40.426	Haplochromis_burtoni
ENSXCOG00000003154	-	82	38.931	ENSIPUG00000017061	-	51	37.815	Ictalurus_punctatus
ENSXCOG00000003154	-	93	40.397	ENSKMAG00000013085	-	50	40.876	Kryptolebias_marmoratus
ENSXCOG00000003154	-	90	33.094	ENSMAMG00000019150	-	61	36.765	Mastacembelus_armatus
ENSXCOG00000003154	-	73	31.858	ENSMZEG00005007816	-	55	31.858	Maylandia_zebra
ENSXCOG00000003154	-	96	55.484	ENSMZEG00005010549	-	53	56.028	Maylandia_zebra
ENSXCOG00000003154	-	89	36.806	ENSMZEG00005015165	-	70	35.938	Maylandia_zebra
ENSXCOG00000003154	-	93	37.838	ENSMALG00000016641	-	58	36.567	Monopterus_albus
ENSXCOG00000003154	-	93	40.000	ENSMALG00000011352	-	52	38.971	Monopterus_albus
ENSXCOG00000003154	-	91	36.806	ENSMALG00000006417	-	74	36.154	Monopterus_albus
ENSXCOG00000003154	-	96	37.662	ENSMALG00000015013	-	58	37.500	Monopterus_albus
ENSXCOG00000003154	-	95	38.462	ENSMALG00000000917	-	62	38.806	Monopterus_albus
ENSXCOG00000003154	-	95	40.000	ENSNBRG00000024357	-	76	41.135	Neolamprologus_brichardi
ENSXCOG00000003154	-	87	35.461	ENSNBRG00000001191	-	71	35.252	Neolamprologus_brichardi
ENSXCOG00000003154	-	88	30.882	ENSNBRG00000021767	-	55	31.387	Neolamprologus_brichardi
ENSXCOG00000003154	-	77	40.000	ENSNBRG00000012007	-	72	39.831	Neolamprologus_brichardi
ENSXCOG00000003154	-	81	42.857	ENSORLG00000029078	-	51	42.857	Oryzias_latipes
ENSXCOG00000003154	-	89	33.813	ENSORLG00000022033	-	61	33.577	Oryzias_latipes
ENSXCOG00000003154	-	88	30.147	ENSORLG00000027612	-	62	30.597	Oryzias_latipes
ENSXCOG00000003154	-	90	36.691	ENSORLG00020001640	-	67	36.691	Oryzias_latipes_hni
ENSXCOG00000003154	-	96	45.806	ENSORLG00020018147	-	59	46.099	Oryzias_latipes_hni
ENSXCOG00000003154	-	88	37.500	ENSORLG00020012794	-	54	39.706	Oryzias_latipes_hni
ENSXCOG00000003154	-	95	36.842	ENSORLG00020005670	-	52	36.691	Oryzias_latipes_hni
ENSXCOG00000003154	-	90	43.836	ENSORLG00015017469	-	50	43.939	Oryzias_latipes_hsok
ENSXCOG00000003154	-	88	41.176	ENSPNYG00000006290	-	63	41.481	Pundamilia_nyererei
ENSXCOG00000003154	-	77	35.537	ENSPNYG00000022945	-	61	35.294	Pundamilia_nyererei
ENSXCOG00000003154	-	95	42.484	ENSPNAG00000024994	-	84	42.446	Pygocentrus_nattereri
ENSXCOG00000003154	-	87	54.610	ENSSMAG00000015804	-	51	55.118	Scophthalmus_maximus
ENSXCOG00000003154	-	96	34.868	ENSSDUG00000006485	-	66	38.406	Seriola_dumerili
ENSXCOG00000003154	-	75	35.294	ENSXETG00000031733	-	69	35.294	Xenopus_tropicalis