EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003158 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5886 bases
Position: chrKQ557201.1:8771391-8777276
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004021	DCP1	PF06058.13	2.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004065	-	354	-	ENSXCOP00000004021	117 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003158	-	81	72.632	ENSXCOG00000013593	-	83	72.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003158	-	82	71.875	ENSG00000272886	DCP1A	94	71.875	Homo_sapiens
ENSXCOG00000003158	-	86	95.050	ENSAPOG00000000313	-	83	95.050	Acanthochromis_polyacanthus
ENSXCOG00000003158	-	88	82.692	ENSACIG00000001522	-	85	82.692	Amphilophus_citrinellus
ENSXCOG00000003158	-	81	97.895	ENSCSEG00000000411	-	68	97.895	Cynoglossus_semilaevis
ENSXCOG00000003158	-	83	91.753	ENSHCOG00000002646	-	87	91.753	Hippocampus_comes
ENSXCOG00000003158	-	83	73.196	ENSJJAG00000015125	-	84	73.196	Jaculus_jaculus
ENSXCOG00000003158	-	87	90.196	ENSLBEG00000007888	-	96	90.196	Labrus_bergylta
ENSXCOG00000003158	-	87	95.098	ENSMAMG00000016948	dcp1a	81	95.098	Mastacembelus_armatus
ENSXCOG00000003158	-	83	72.165	ENSMAUG00000004516	-	61	72.165	Mesocricetus_auratus
ENSXCOG00000003158	-	83	72.165	ENSMOCG00000021702	-	94	72.165	Microtus_ochrogaster
ENSXCOG00000003158	-	85	81.000	ENSMMOG00000021667	-	98	81.000	Mola_mola
ENSXCOG00000003158	-	94	64.035	ENSMUSG00000021962	Dcp1a	56	67.677	Mus_musculus
ENSXCOG00000003158	-	85	70.707	ENSNGAG00000019963	-	88	70.707	Nannospalax_galili
ENSXCOG00000003158	-	88	88.350	ENSNBRG00000001616	-	66	88.350	Neolamprologus_brichardi
ENSXCOG00000003158	-	83	71.134	ENSODEG00000008427	-	78	71.134	Octodon_degus
ENSXCOG00000003158	-	83	95.876	ENSPMGG00000001138	-	68	95.876	Periophthalmus_magnuspinnatus
ENSXCOG00000003158	-	90	85.714	ENSPNYG00000009483	-	78	85.714	Pundamilia_nyererei
ENSXCOG00000003158	-	83	74.227	ENSSPUG00000001785	-	92	74.227	Sphenodon_punctatus