EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003192 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5960 bases
Position: chrKQ557202.1:6794763-6800722
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004064	MMR_HSR1	PF01926.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004108	-	636	-	ENSXCOP00000004064	211 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003192	-	53	32.143	ENSXCOG00000004543	arl8bb	59	33.333
ENSXCOG00000003192	-	75	38.125	ENSXCOG00000006259	rab6a	76	38.125
ENSXCOG00000003192	-	67	45.455	ENSXCOG00000019533	rab13	76	45.455
ENSXCOG00000003192	-	66	37.324	ENSXCOG00000016452	rab22a	73	37.324
ENSXCOG00000003192	-	65	46.429	ENSXCOG00000008042	-	64	46.429
ENSXCOG00000003192	-	53	31.250	ENSXCOG00000013402	arl8ba	64	31.250
ENSXCOG00000003192	-	75	37.654	ENSXCOG00000015802	RAB41	75	37.654
ENSXCOG00000003192	-	74	38.365	ENSXCOG00000003428	rab42a	65	38.365
ENSXCOG00000003192	-	64	40.876	ENSXCOG00000018683	zgc:101559	58	40.876
ENSXCOG00000003192	-	57	42.975	ENSXCOG00000020121	rab5aa	56	42.975
ENSXCOG00000003192	-	65	41.429	ENSXCOG00000020125	rab25a	91	39.024
ENSXCOG00000003192	-	54	47.826	ENSXCOG00000008410	si:dkey-34d22.5	51	47.826
ENSXCOG00000003192	-	53	30.172	ENSXCOG00000017380	arl5c	60	30.172
ENSXCOG00000003192	-	65	38.686	ENSXCOG00000006300	-	58	38.686
ENSXCOG00000003192	-	75	38.272	ENSXCOG00000002232	rab6bb	76	38.272
ENSXCOG00000003192	-	57	42.975	ENSXCOG00000004227	rab25b	57	42.975
ENSXCOG00000003192	-	65	45.000	ENSXCOG00000004226	rab11al	64	45.000
ENSXCOG00000003192	-	75	36.646	ENSXCOG00000016788	rab5c	74	36.646
ENSXCOG00000003192	-	54	46.903	ENSXCOG00000013842	rab1ab	55	46.903
ENSXCOG00000003192	-	56	46.400	ENSXCOG00000000469	rab33ba	52	46.400
ENSXCOG00000003192	-	57	31.452	ENSXCOG00000013226	rasd4	58	31.452
ENSXCOG00000003192	-	53	43.860	ENSXCOG00000012032	-	51	43.860
ENSXCOG00000003192	-	54	42.735	ENSXCOG00000019054	rab9a	53	42.735
ENSXCOG00000003192	-	53	35.043	ENSXCOG00000016370	RAB29	56	35.043
ENSXCOG00000003192	-	57	48.333	ENSXCOG00000009194	-	88	48.333
ENSXCOG00000003192	-	65	46.429	ENSXCOG00000009190	-	64	46.429
ENSXCOG00000003192	-	54	43.590	ENSXCOG00000019921	rab7a	56	43.590
ENSXCOG00000003192	-	63	44.030	ENSXCOG00000006807	rab39bb	62	44.030
ENSXCOG00000003192	-	54	41.880	ENSXCOG00000009094	rab9b	57	41.880
ENSXCOG00000003192	-	54	42.735	ENSXCOG00000020575	RAB9A	53	42.735
ENSXCOG00000003192	-	65	46.429	ENSXCOG00000001357	rab11a	53	46.429
ENSXCOG00000003192	-	56	34.677	ENSXCOG00000019281	rheb	65	34.677
ENSXCOG00000003192	-	53	48.214	ENSXCOG00000010695	zgc:171927	54	48.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003192	-	57	88.710	ENSEASG00005019032	-	76	88.710	Equus_asinus_asinus