EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003254 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2270 bases
Position: chrKQ557219.1:13707884-13710153
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004139	RRM_1	PF00076.22	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004184	PABPN1L-201	696	-	ENSXCOP00000004139	231 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003254	PABPN1L	92	91.038	ENSAPOG00000000685	PABPN1L	67	91.787	Acanthochromis_polyacanthus
ENSXCOG00000003254	PABPN1L	85	91.878	ENSACIG00000021400	PABPN1L	84	92.667	Amphilophus_citrinellus
ENSXCOG00000003254	PABPN1L	92	92.019	ENSAOCG00000019844	PABPN1L	79	92.754	Amphiprion_ocellaris
ENSXCOG00000003254	PABPN1L	92	92.488	ENSAPEG00000019534	PABPN1L	79	93.237	Amphiprion_percula
ENSXCOG00000003254	PABPN1L	92	91.981	ENSATEG00000011646	PABPN1L	83	92.271	Anabas_testudineus
ENSXCOG00000003254	PABPN1L	52	56.303	ENSAPLG00000009174	PABPN1L	81	63.542	Anas_platyrhynchos
ENSXCOG00000003254	PABPN1L	71	56.886	ENSACAG00000013250	PABPN1L	60	68.468	Anolis_carolinensis
ENSXCOG00000003254	PABPN1L	92	91.080	ENSACLG00000025147	PABPN1L	79	91.787	Astatotilapia_calliptera
ENSXCOG00000003254	PABPN1L	100	84.416	ENSCSEG00000001142	pabpn1l	80	86.473	Cynoglossus_semilaevis
ENSXCOG00000003254	PABPN1L	100	97.835	ENSCVAG00000015547	PABPN1L	88	97.835	Cyprinodon_variegatus
ENSXCOG00000003254	PABPN1L	91	69.194	ENSELUG00000018385	PABPN1L	79	65.366	Esox_lucius
ENSXCOG00000003254	PABPN1L	100	96.537	ENSFHEG00000018295	PABPN1L	88	96.537	Fundulus_heteroclitus
ENSXCOG00000003254	PABPN1L	92	77.315	ENSGMOG00000001475	PABPN1L	79	79.621	Gadus_morhua
ENSXCOG00000003254	PABPN1L	63	61.379	ENSGALG00000006242	PABPN1L	63	64.865	Gallus_gallus
ENSXCOG00000003254	PABPN1L	100	99.567	ENSGAFG00000012565	PABPN1L	88	99.567	Gambusia_affinis
ENSXCOG00000003254	PABPN1L	94	85.973	ENSGACG00000015428	PABPN1L	79	87.204	Gasterosteus_aculeatus
ENSXCOG00000003254	PABPN1L	92	91.080	ENSHBUG00000002388	PABPN1L	79	91.787	Haplochromis_burtoni
ENSXCOG00000003254	PABPN1L	93	88.785	ENSHCOG00000004151	PABPN1L	77	89.372	Hippocampus_comes
ENSXCOG00000003254	PABPN1L	58	73.684	ENSIPUG00000023583	PABPN1L	53	82.524	Ictalurus_punctatus
ENSXCOG00000003254	PABPN1L	93	91.628	ENSKMAG00000001112	PABPN1L	92	93.237	Kryptolebias_marmoratus
ENSXCOG00000003254	PABPN1L	93	84.722	ENSLBEG00000011647	PABPN1L	76	87.560	Labrus_bergylta
ENSXCOG00000003254	PABPN1L	92	91.080	ENSMZEG00005002186	PABPN1L	79	91.787	Maylandia_zebra
ENSXCOG00000003254	PABPN1L	85	90.404	ENSMMOG00000017714	PABPN1L	86	90.404	Mola_mola
ENSXCOG00000003254	PABPN1L	92	86.854	ENSMALG00000016926	PABPN1L	79	87.923	Monopterus_albus
ENSXCOG00000003254	PABPN1L	92	91.080	ENSNBRG00000017078	PABPN1L	87	91.787	Neolamprologus_brichardi
ENSXCOG00000003254	PABPN1L	100	84.416	ENSORLG00000026560	PABPN1L	79	84.804	Oryzias_latipes
ENSXCOG00000003254	PABPN1L	100	84.416	ENSORLG00020015068	PABPN1L	79	84.804	Oryzias_latipes_hni
ENSXCOG00000003254	PABPN1L	100	84.416	ENSORLG00015000397	PABPN1L	79	84.804	Oryzias_latipes_hsok
ENSXCOG00000003254	PABPN1L	100	83.117	ENSOMEG00000017896	PABPN1L	56	83.824	Oryzias_melastigma
ENSXCOG00000003254	PABPN1L	64	63.758	ENSPSIG00000003404	PABPN1L	52	75.510	Pelodiscus_sinensis
ENSXCOG00000003254	PABPN1L	92	84.507	ENSPMGG00000013927	PABPN1L	91	85.507	Periophthalmus_magnuspinnatus
ENSXCOG00000003254	PABPN1L	59	60.584	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSXCOG00000003254	PABPN1L	100	99.567	ENSPFOG00000007001	PABPN1L	88	99.567	Poecilia_formosa
ENSXCOG00000003254	PABPN1L	100	99.567	ENSPLAG00000018431	PABPN1L	88	99.567	Poecilia_latipinna
ENSXCOG00000003254	PABPN1L	84	86.294	ENSPMEG00000000169	-	91	90.761	Poecilia_mexicana
ENSXCOG00000003254	PABPN1L	100	99.567	ENSPMEG00000009108	PABPN1L	88	99.567	Poecilia_mexicana
ENSXCOG00000003254	PABPN1L	100	99.134	ENSPREG00000022533	PABPN1L	100	99.134	Poecilia_reticulata
ENSXCOG00000003254	PABPN1L	92	91.080	ENSPNYG00000004803	PABPN1L	79	91.787	Pundamilia_nyererei
ENSXCOG00000003254	PABPN1L	92	86.239	ENSSMAG00000021348	PABPN1L	79	83.491	Scophthalmus_maximus
ENSXCOG00000003254	PABPN1L	92	92.019	ENSSDUG00000006986	PABPN1L	79	92.754	Seriola_dumerili
ENSXCOG00000003254	PABPN1L	92	92.019	ENSSLDG00000021845	PABPN1L	79	92.754	Seriola_lalandi_dorsalis
ENSXCOG00000003254	PABPN1L	93	90.698	ENSSPAG00000017978	PABPN1L	79	92.271	Stegastes_partitus
ENSXCOG00000003254	PABPN1L	100	80.087	ENSTRUG00000024725	PABPN1L	76	79.710	Takifugu_rubripes
ENSXCOG00000003254	PABPN1L	83	92.188	ENSTNIG00000009416	PABPN1L	100	92.188	Tetraodon_nigroviridis
ENSXCOG00000003254	PABPN1L	98	95.133	ENSXMAG00000029090	PABPN1L	100	95.133	Xiphophorus_maculatus