EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003267 (Gene tree)
Gene ID: -
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 18373 bases
Position: chrKQ557224.1:17253860-17272232
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004156	MMR_HSR1	PF01926.23	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004201	-	2421	-	ENSXCOP00000004156	806 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003267	opa1	93	91.689	ENSAPOG00000011980	opa1	79	90.568	Acanthochromis_polyacanthus
ENSXCOG00000003267	opa1	93	91.455	ENSACIG00000012521	opa1	78	91.455	Amphilophus_citrinellus
ENSXCOG00000003267	opa1	92	91.946	ENSAOCG00000020559	opa1	78	91.946	Amphiprion_ocellaris
ENSXCOG00000003267	opa1	92	91.931	ENSAPEG00000001641	opa1	78	92.857	Amphiprion_percula
ENSXCOG00000003267	opa1	92	88.918	ENSAMXG00000012295	opa1	80	89.524	Astyanax_mexicanus
ENSXCOG00000003267	opa1	83	56.528	WBGene00001134	eat-3	69	57.508	Caenorhabditis_elegans
ENSXCOG00000003267	opa1	93	84.133	ENSCSEG00000014266	opa1	77	84.133	Cynoglossus_semilaevis
ENSXCOG00000003267	opa1	92	94.110	ENSCVAG00000002438	opa1	78	94.110	Cyprinodon_variegatus
ENSXCOG00000003267	opa1	92	88.786	ENSDARG00000070801	opa1	78	88.786	Danio_rerio
ENSXCOG00000003267	opa1	89	54.267	FBgn0261276	Opa1	89	58.188	Drosophila_melanogaster
ENSXCOG00000003267	opa1	92	87.248	ENSFHEG00000003616	opa1	78	83.841	Fundulus_heteroclitus
ENSXCOG00000003267	opa1	92	92.063	ENSGACG00000009278	opa1	78	92.063	Gasterosteus_aculeatus
ENSXCOG00000003267	opa1	91	92.627	ENSHBUG00000005897	opa1	79	92.627	Haplochromis_burtoni
ENSXCOG00000003267	opa1	93	90.413	ENSHCOG00000016756	opa1	78	90.413	Hippocampus_comes
ENSXCOG00000003267	opa1	70	94.190	ENSKMAG00000009415	opa1	72	94.190	Kryptolebias_marmoratus
ENSXCOG00000003267	opa1	92	90.483	ENSMMOG00000008891	opa1	78	90.483	Mola_mola
ENSXCOG00000003267	opa1	92	88.760	ENSMALG00000016968	opa1	79	88.760	Monopterus_albus
ENSXCOG00000003267	opa1	93	91.823	ENSNBRG00000020394	opa1	78	91.823	Neolamprologus_brichardi
ENSXCOG00000003267	opa1	92	81.582	ENSPKIG00000003379	opa1	78	81.582	Paramormyrops_kingsleyae
ENSXCOG00000003267	opa1	92	77.908	ENSPKIG00000006473	OPA1	78	78.039	Paramormyrops_kingsleyae
ENSXCOG00000003267	opa1	93	91.310	ENSPNYG00000021747	opa1	78	91.310	Pundamilia_nyererei
ENSXCOG00000003267	opa1	92	88.859	ENSPNAG00000001917	opa1	82	87.209	Pygocentrus_nattereri
ENSXCOG00000003267	opa1	84	94.944	ENSSFOG00015009303	OPA1	79	78.792	Scleropages_formosus
ENSXCOG00000003267	opa1	90	90.096	ENSSMAG00000001797	opa1	76	90.096	Scophthalmus_maximus
ENSXCOG00000003267	opa1	50	93.120	ENSSDUG00000004968	opa1	65	93.120	Seriola_dumerili
ENSXCOG00000003267	opa1	92	85.767	ENSSLDG00000011089	opa1	79	85.520	Seriola_lalandi_dorsalis
ENSXCOG00000003267	opa1	92	93.122	ENSSPAG00000018388	opa1	78	93.122	Stegastes_partitus
ENSXCOG00000003267	opa1	69	97.679	ENSXMAG00000005593	opa1	75	97.679	Xiphophorus_maculatus