EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003360 (Gene tree)
Gene ID: -
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex%2C subunit 6b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 12434 bases
Position: chrKQ557216.1:17668448-17680881
Accession: ZDB-GENE-071004-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004272	Exo_endo_phos	PF03372.23	2.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004319	-	1608	-	ENSXCOP00000004272	535 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003360	cnot6b	100	82.258	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSXCOG00000003360	cnot6b	100	93.560	ENSAPOG00000009994	cnot6b	100	93.560	Acanthochromis_polyacanthus
ENSXCOG00000003360	cnot6b	100	82.321	ENSAMEG00000000949	CNOT6	99	82.321	Ailuropoda_melanoleuca
ENSXCOG00000003360	cnot6b	100	93.103	ENSACIG00000016566	cnot6b	100	93.103	Amphilophus_citrinellus
ENSXCOG00000003360	cnot6b	100	93.560	ENSAOCG00000006893	cnot6b	100	93.560	Amphiprion_ocellaris
ENSXCOG00000003360	cnot6b	100	93.560	ENSAPEG00000016949	cnot6b	100	93.560	Amphiprion_percula
ENSXCOG00000003360	cnot6b	100	90.340	ENSATEG00000007862	cnot6b	100	90.340	Anabas_testudineus
ENSXCOG00000003360	cnot6b	100	82.796	ENSAPLG00000012715	CNOT6	99	83.154	Anas_platyrhynchos
ENSXCOG00000003360	cnot6b	100	83.333	ENSACAG00000016548	CNOT6	100	83.333	Anolis_carolinensis
ENSXCOG00000003360	cnot6b	100	82.437	ENSANAG00000030436	CNOT6	96	82.437	Aotus_nancymaae
ENSXCOG00000003360	cnot6b	100	91.950	ENSACLG00000008279	cnot6b	100	91.950	Astatotilapia_calliptera
ENSXCOG00000003360	cnot6b	100	85.152	ENSAMXG00000034694	cnot6b	100	85.152	Astyanax_mexicanus
ENSXCOG00000003360	cnot6b	100	86.380	ENSAMXG00000019140	cnot6a	100	86.380	Astyanax_mexicanus
ENSXCOG00000003360	cnot6b	100	82.437	ENSBTAG00000017362	CNOT6	100	82.437	Bos_taurus
ENSXCOG00000003360	cnot6b	100	82.079	ENSCJAG00000009795	CNOT6	100	82.079	Callithrix_jacchus
ENSXCOG00000003360	cnot6b	100	82.616	ENSCAFG00000000464	CNOT6	100	82.616	Canis_familiaris
ENSXCOG00000003360	cnot6b	100	82.616	ENSCAFG00020002441	CNOT6	100	82.616	Canis_lupus_dingo
ENSXCOG00000003360	cnot6b	100	82.079	ENSCHIG00000019100	CNOT6	100	82.079	Capra_hircus
ENSXCOG00000003360	cnot6b	100	81.720	ENSTSYG00000003982	CNOT6	100	81.720	Carlito_syrichta
ENSXCOG00000003360	cnot6b	100	77.778	ENSCPOG00000035657	CNOT6	100	77.778	Cavia_porcellus
ENSXCOG00000003360	cnot6b	100	77.778	ENSCCAG00000033670	CNOT6	100	77.778	Cebus_capucinus
ENSXCOG00000003360	cnot6b	100	82.258	ENSCATG00000042014	CNOT6	100	82.258	Cercocebus_atys
ENSXCOG00000003360	cnot6b	100	81.183	ENSCLAG00000010489	CNOT6	100	81.183	Chinchilla_lanigera
ENSXCOG00000003360	cnot6b	100	82.258	ENSCSAG00000008165	CNOT6	100	82.258	Chlorocebus_sabaeus
ENSXCOG00000003360	cnot6b	100	81.720	ENSCHOG00000009680	CNOT6	100	82.079	Choloepus_hoffmanni
ENSXCOG00000003360	cnot6b	100	83.154	ENSCPBG00000008908	CNOT6	100	83.513	Chrysemys_picta_bellii
ENSXCOG00000003360	cnot6b	100	82.437	ENSCANG00000026756	CNOT6	100	82.437	Colobus_angolensis_palliatus
ENSXCOG00000003360	cnot6b	100	81.736	ENSCGRG00001011452	Cnot6	100	81.736	Cricetulus_griseus_chok1gshd
ENSXCOG00000003360	cnot6b	100	78.853	ENSCGRG00000010407	Cnot6	100	78.853	Cricetulus_griseus_crigri
ENSXCOG00000003360	cnot6b	100	92.487	ENSCSEG00000010939	cnot6b	100	92.487	Cynoglossus_semilaevis
ENSXCOG00000003360	cnot6b	100	95.628	ENSCVAG00000010538	cnot6b	100	95.628	Cyprinodon_variegatus
ENSXCOG00000003360	cnot6b	100	84.436	ENSDARG00000101072	cnot6b	100	84.436	Danio_rerio
ENSXCOG00000003360	cnot6b	100	85.663	ENSDARG00000008255	cnot6a	100	85.663	Danio_rerio
ENSXCOG00000003360	cnot6b	100	82.796	ENSDNOG00000041644	CNOT6	100	82.796	Dasypus_novemcinctus
ENSXCOG00000003360	cnot6b	100	73.477	ENSDORG00000001708	Cnot6	100	73.477	Dipodomys_ordii
ENSXCOG00000003360	cnot6b	100	65.714	ENSETEG00000006975	CNOT6	100	65.714	Echinops_telfairi
ENSXCOG00000003360	cnot6b	89	78.024	ENSEASG00005012957	-	99	78.024	Equus_asinus_asinus
ENSXCOG00000003360	cnot6b	100	82.437	ENSEASG00005012794	-	100	82.437	Equus_asinus_asinus
ENSXCOG00000003360	cnot6b	100	82.975	ENSECAG00000019325	CNOT6	100	82.975	Equus_caballus
ENSXCOG00000003360	cnot6b	100	78.481	ENSECAG00000012704	-	99	78.481	Equus_caballus
ENSXCOG00000003360	cnot6b	100	82.258	ENSEEUG00000015382	CNOT6	100	82.258	Erinaceus_europaeus
ENSXCOG00000003360	cnot6b	100	84.656	ENSELUG00000015981	cnot6b	99	84.656	Esox_lucius
ENSXCOG00000003360	cnot6b	100	84.229	ENSELUG00000024580	cnot6a	100	84.229	Esox_lucius
ENSXCOG00000003360	cnot6b	100	82.796	ENSFCAG00000001881	CNOT6	100	82.796	Felis_catus
ENSXCOG00000003360	cnot6b	100	82.975	ENSFALG00000007699	CNOT6	100	83.333	Ficedula_albicollis
ENSXCOG00000003360	cnot6b	100	80.824	ENSFDAG00000001999	CNOT6	100	80.824	Fukomys_damarensis
ENSXCOG00000003360	cnot6b	71	97.179	ENSFHEG00000013756	cnot6b	99	97.179	Fundulus_heteroclitus
ENSXCOG00000003360	cnot6b	94	89.792	ENSGMOG00000009767	cnot6b	99	89.792	Gadus_morhua
ENSXCOG00000003360	cnot6b	100	82.796	ENSGALG00000034316	CNOT6	100	83.154	Gallus_gallus
ENSXCOG00000003360	cnot6b	100	94.982	ENSGAFG00000008525	cnot6b	100	94.982	Gambusia_affinis
ENSXCOG00000003360	cnot6b	94	88.658	ENSGACG00000018046	cnot6b	99	88.658	Gasterosteus_aculeatus
ENSXCOG00000003360	cnot6b	100	70.642	ENSGAGG00000012176	CNOT6	100	71.009	Gopherus_agassizii
ENSXCOG00000003360	cnot6b	100	82.258	ENSGGOG00000003675	CNOT6	100	82.258	Gorilla_gorilla
ENSXCOG00000003360	cnot6b	100	92.129	ENSHBUG00000002819	cnot6b	100	92.129	Haplochromis_burtoni
ENSXCOG00000003360	cnot6b	100	81.183	ENSHGLG00000017756	CNOT6	100	81.183	Heterocephalus_glaber_female
ENSXCOG00000003360	cnot6b	100	81.183	ENSHGLG00100005747	CNOT6	100	81.183	Heterocephalus_glaber_male
ENSXCOG00000003360	cnot6b	100	92.559	ENSHCOG00000016176	cnot6b	100	92.559	Hippocampus_comes
ENSXCOG00000003360	cnot6b	100	86.225	ENSIPUG00000017482	cnot6b	100	86.225	Ictalurus_punctatus
ENSXCOG00000003360	cnot6b	100	86.201	ENSIPUG00000019831	cnot6a	100	86.201	Ictalurus_punctatus
ENSXCOG00000003360	cnot6b	100	82.258	ENSSTOG00000002803	CNOT6	100	82.258	Ictidomys_tridecemlineatus
ENSXCOG00000003360	cnot6b	100	81.900	ENSJJAG00000012296	Cnot6	100	81.900	Jaculus_jaculus
ENSXCOG00000003360	cnot6b	100	93.369	ENSKMAG00000004640	cnot6b	100	93.369	Kryptolebias_marmoratus
ENSXCOG00000003360	cnot6b	100	95.709	ENSLBEG00000027917	cnot6b	100	95.709	Labrus_bergylta
ENSXCOG00000003360	cnot6b	100	89.267	ENSLOCG00000010102	cnot6b	99	89.267	Lepisosteus_oculatus
ENSXCOG00000003360	cnot6b	100	82.975	ENSLAFG00000016742	CNOT6	100	82.975	Loxodonta_africana
ENSXCOG00000003360	cnot6b	100	82.258	ENSMFAG00000030867	CNOT6	100	82.258	Macaca_fascicularis
ENSXCOG00000003360	cnot6b	100	82.258	ENSMMUG00000018690	CNOT6	100	82.258	Macaca_mulatta
ENSXCOG00000003360	cnot6b	100	82.258	ENSMNEG00000038565	CNOT6	100	82.258	Macaca_nemestrina
ENSXCOG00000003360	cnot6b	100	82.258	ENSMLEG00000010555	CNOT6	100	82.258	Mandrillus_leucophaeus
ENSXCOG00000003360	cnot6b	100	93.381	ENSMAMG00000007515	cnot6b	100	93.381	Mastacembelus_armatus
ENSXCOG00000003360	cnot6b	100	91.950	ENSMZEG00005012899	cnot6b	100	91.950	Maylandia_zebra
ENSXCOG00000003360	cnot6b	100	81.541	ENSMAUG00000019798	Cnot6	100	81.541	Mesocricetus_auratus
ENSXCOG00000003360	cnot6b	100	80.645	ENSMICG00000013018	-	100	80.645	Microcebus_murinus
ENSXCOG00000003360	cnot6b	98	74.768	ENSMICG00000028378	-	99	74.768	Microcebus_murinus
ENSXCOG00000003360	cnot6b	100	81.541	ENSMOCG00000021662	Cnot6	100	81.541	Microtus_ochrogaster
ENSXCOG00000003360	cnot6b	100	90.744	ENSMMOG00000003227	cnot6b	100	90.744	Mola_mola
ENSXCOG00000003360	cnot6b	100	82.796	ENSMODG00000003979	CNOT6	100	83.154	Monodelphis_domestica
ENSXCOG00000003360	cnot6b	100	93.023	ENSMALG00000014251	cnot6b	100	93.023	Monopterus_albus
ENSXCOG00000003360	cnot6b	100	81.917	MGP_CAROLIEiJ_G0016277	Cnot6	100	81.917	Mus_caroli
ENSXCOG00000003360	cnot6b	100	81.917	ENSMUSG00000020362	Cnot6	100	81.917	Mus_musculus
ENSXCOG00000003360	cnot6b	100	81.917	MGP_PahariEiJ_G0017413	Cnot6	100	81.917	Mus_pahari
ENSXCOG00000003360	cnot6b	100	81.917	MGP_SPRETEiJ_G0017122	Cnot6	100	81.917	Mus_spretus
ENSXCOG00000003360	cnot6b	100	82.975	ENSMPUG00000000587	CNOT6	96	82.975	Mustela_putorius_furo
ENSXCOG00000003360	cnot6b	100	81.172	ENSMLUG00000010257	CNOT6	100	81.172	Myotis_lucifugus
ENSXCOG00000003360	cnot6b	100	80.824	ENSNGAG00000008269	Cnot6	100	81.183	Nannospalax_galili
ENSXCOG00000003360	cnot6b	100	92.129	ENSNBRG00000010798	cnot6b	100	92.129	Neolamprologus_brichardi
ENSXCOG00000003360	cnot6b	100	82.098	ENSNLEG00000002322	CNOT6	100	82.098	Nomascus_leucogenys
ENSXCOG00000003360	cnot6b	81	81.395	ENSMEUG00000000025	CNOT6	81	82.326	Notamacropus_eugenii
ENSXCOG00000003360	cnot6b	87	81.623	ENSOPRG00000008244	-	88	81.623	Ochotona_princeps
ENSXCOG00000003360	cnot6b	100	80.287	ENSODEG00000007041	CNOT6	100	80.287	Octodon_degus
ENSXCOG00000003360	cnot6b	74	90.307	ENSONIG00000013027	cnot6b	99	90.307	Oreochromis_niloticus
ENSXCOG00000003360	cnot6b	100	82.796	ENSOANG00000010226	CNOT6	100	82.796	Ornithorhynchus_anatinus
ENSXCOG00000003360	cnot6b	100	81.607	ENSOCUG00000011083	CNOT6	100	81.607	Oryctolagus_cuniculus
ENSXCOG00000003360	cnot6b	100	92.129	ENSORLG00000005059	cnot6b	100	92.129	Oryzias_latipes
ENSXCOG00000003360	cnot6b	100	92.129	ENSORLG00020012784	cnot6b	100	92.129	Oryzias_latipes_hni
ENSXCOG00000003360	cnot6b	93	91.396	ENSORLG00015022658	cnot6b	98	91.396	Oryzias_latipes_hsok
ENSXCOG00000003360	cnot6b	100	92.665	ENSOMEG00000005295	cnot6b	100	92.665	Oryzias_melastigma
ENSXCOG00000003360	cnot6b	93	81.143	ENSOGAG00000032470	CNOT6	100	81.143	Otolemur_garnettii
ENSXCOG00000003360	cnot6b	97	81.400	ENSOARG00000001003	CNOT6	100	81.400	Ovis_aries
ENSXCOG00000003360	cnot6b	100	82.258	ENSPPAG00000032253	CNOT6	100	82.258	Pan_paniscus
ENSXCOG00000003360	cnot6b	100	82.616	ENSPPRG00000011912	CNOT6	100	82.616	Panthera_pardus
ENSXCOG00000003360	cnot6b	100	82.616	ENSPTIG00000016794	CNOT6	100	82.616	Panthera_tigris_altaica
ENSXCOG00000003360	cnot6b	100	82.459	ENSPTRG00000017636	CNOT6	100	82.459	Pan_troglodytes
ENSXCOG00000003360	cnot6b	100	82.258	ENSPANG00000016191	CNOT6	100	82.258	Papio_anubis
ENSXCOG00000003360	cnot6b	100	87.299	ENSPKIG00000021368	cnot6b	100	87.299	Paramormyrops_kingsleyae
ENSXCOG00000003360	cnot6b	98	82.752	ENSPSIG00000017307	CNOT6	100	83.119	Pelodiscus_sinensis
ENSXCOG00000003360	cnot6b	100	92.922	ENSPMGG00000011238	cnot6b	100	92.922	Periophthalmus_magnuspinnatus
ENSXCOG00000003360	cnot6b	100	80.645	ENSPEMG00000000627	Cnot6	100	81.004	Peromyscus_maniculatus_bairdii
ENSXCOG00000003360	cnot6b	100	82.975	ENSPCIG00000020319	CNOT6	99	83.333	Phascolarctos_cinereus
ENSXCOG00000003360	cnot6b	100	95.512	ENSPFOG00000006291	cnot6b	100	95.341	Poecilia_formosa
ENSXCOG00000003360	cnot6b	100	99.252	ENSPLAG00000008266	cnot6b	100	99.252	Poecilia_latipinna
ENSXCOG00000003360	cnot6b	100	95.520	ENSPMEG00000009091	cnot6b	100	95.520	Poecilia_mexicana
ENSXCOG00000003360	cnot6b	100	95.818	ENSPREG00000003713	cnot6b	100	95.818	Poecilia_reticulata
ENSXCOG00000003360	cnot6b	100	82.258	ENSPPYG00000016137	CNOT6	100	82.258	Pongo_abelii
ENSXCOG00000003360	cnot6b	74	83.521	ENSPCAG00000005599	-	71	83.521	Procavia_capensis
ENSXCOG00000003360	cnot6b	100	76.523	ENSPCOG00000017359	CNOT6	100	77.240	Propithecus_coquereli
ENSXCOG00000003360	cnot6b	100	79.211	ENSPVAG00000003069	CNOT6	100	79.211	Pteropus_vampyrus
ENSXCOG00000003360	cnot6b	100	91.771	ENSPNYG00000000321	cnot6b	100	91.771	Pundamilia_nyererei
ENSXCOG00000003360	cnot6b	100	86.738	ENSPNAG00000029586	cnot6a	100	86.738	Pygocentrus_nattereri
ENSXCOG00000003360	cnot6b	100	85.689	ENSPNAG00000028816	cnot6b	100	85.689	Pygocentrus_nattereri
ENSXCOG00000003360	cnot6b	100	82.014	ENSRNOG00000054891	Cnot6	100	82.014	Rattus_norvegicus
ENSXCOG00000003360	cnot6b	100	82.079	ENSRBIG00000004309	CNOT6	100	82.079	Rhinopithecus_bieti
ENSXCOG00000003360	cnot6b	100	82.079	ENSRROG00000035378	CNOT6	100	82.079	Rhinopithecus_roxellana
ENSXCOG00000003360	cnot6b	100	82.437	ENSSBOG00000030494	CNOT6	100	82.437	Saimiri_boliviensis_boliviensis
ENSXCOG00000003360	cnot6b	100	82.796	ENSSHAG00000017436	CNOT6	100	83.154	Sarcophilus_harrisii
ENSXCOG00000003360	cnot6b	100	88.372	ENSSFOG00015015133	CNOT6	100	88.730	Scleropages_formosus
ENSXCOG00000003360	cnot6b	100	87.299	ENSSFOG00015022383	cnot6a	96	87.299	Scleropages_formosus
ENSXCOG00000003360	cnot6b	100	91.592	ENSSMAG00000003084	cnot6b	100	91.592	Scophthalmus_maximus
ENSXCOG00000003360	cnot6b	100	93.560	ENSSDUG00000004151	cnot6b	100	93.560	Seriola_dumerili
ENSXCOG00000003360	cnot6b	100	93.381	ENSSLDG00000004448	cnot6b	100	93.381	Seriola_lalandi_dorsalis
ENSXCOG00000003360	cnot6b	63	62.011	ENSSARG00000012650	-	100	62.011	Sorex_araneus
ENSXCOG00000003360	cnot6b	100	87.103	ENSSPUG00000007893	CNOT6	100	87.477	Sphenodon_punctatus
ENSXCOG00000003360	cnot6b	100	93.739	ENSSPAG00000000149	cnot6b	100	93.739	Stegastes_partitus
ENSXCOG00000003360	cnot6b	100	82.459	ENSSSCG00000014009	CNOT6	100	82.459	Sus_scrofa
ENSXCOG00000003360	cnot6b	100	82.616	ENSTGUG00000001119	CNOT6	100	82.975	Taeniopygia_guttata
ENSXCOG00000003360	cnot6b	100	89.785	ENSTRUG00000002818	cnot6b	100	89.785	Takifugu_rubripes
ENSXCOG00000003360	cnot6b	100	90.860	ENSTNIG00000004443	cnot6b	99	90.860	Tetraodon_nigroviridis
ENSXCOG00000003360	cnot6b	87	55.236	ENSTBEG00000017094	-	100	55.236	Tupaia_belangeri
ENSXCOG00000003360	cnot6b	100	82.437	ENSTTRG00000009363	CNOT6	100	82.437	Tursiops_truncatus
ENSXCOG00000003360	cnot6b	89	71.372	ENSUAMG00000004579	CNOT6	99	71.372	Ursus_americanus
ENSXCOG00000003360	cnot6b	100	78.803	ENSUMAG00000024577	CNOT6	100	70.050	Ursus_maritimus
ENSXCOG00000003360	cnot6b	83	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSXCOG00000003360	cnot6b	100	82.616	ENSVVUG00000026940	CNOT6	100	82.616	Vulpes_vulpes
ENSXCOG00000003360	cnot6b	100	100.000	ENSXMAG00000008730	cnot6b	100	100.000	Xiphophorus_maculatus