EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003410 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3093 bases
Position: chrKQ557205.1:23553987-23557079
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004328	BUD22	PF09073.10	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004375	-	1446	-	ENSXCOP00000004328	481 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003410	-	99	37.378	ENSG00000151304	SRFBP1	67	42.071	Homo_sapiens
ENSXCOG00000003410	-	99	55.847	ENSAPOG00000021469	-	84	57.927	Acanthochromis_polyacanthus
ENSXCOG00000003410	-	68	56.250	ENSAMEG00000018050	SRFBP1	74	67.647	Ailuropoda_melanoleuca
ENSXCOG00000003410	-	84	84.314	ENSACIG00000019127	-	99	49.170	Amphilophus_citrinellus
ENSXCOG00000003410	-	99	54.781	ENSAOCG00000002182	-	83	57.809	Amphiprion_ocellaris
ENSXCOG00000003410	-	99	54.728	ENSAPEG00000003041	-	84	57.700	Amphiprion_percula
ENSXCOG00000003410	-	99	55.894	ENSATEG00000007289	-	84	57.026	Anabas_testudineus
ENSXCOG00000003410	-	98	37.295	ENSACAG00000003779	SRFBP1	67	43.144	Anolis_carolinensis
ENSXCOG00000003410	-	99	35.953	ENSANAG00000022485	SRFBP1	67	40.705	Aotus_nancymaae
ENSXCOG00000003410	-	99	54.600	ENSACLG00000013909	-	88	51.538	Astatotilapia_calliptera
ENSXCOG00000003410	-	73	57.143	ENSBTAG00000014320	SRFBP1	99	38.632	Bos_taurus
ENSXCOG00000003410	-	99	36.978	ENSCJAG00000017177	SRFBP1	74	75.000	Callithrix_jacchus
ENSXCOG00000003410	-	99	39.113	ENSCAFG00000000512	SRFBP1	75	66.667	Canis_familiaris
ENSXCOG00000003410	-	99	39.113	ENSCAFG00020009389	SRFBP1	75	66.667	Canis_lupus_dingo
ENSXCOG00000003410	-	97	37.006	ENSTSYG00000008630	-	73	70.588	Carlito_syrichta
ENSXCOG00000003410	-	99	37.052	ENSCPOG00000004695	SRFBP1	67	42.671	Cavia_porcellus
ENSXCOG00000003410	-	99	37.805	ENSCCAG00000032237	-	75	70.588	Cebus_capucinus
ENSXCOG00000003410	-	73	57.895	ENSCATG00000040904	SRFBP1	75	67.647	Cercocebus_atys
ENSXCOG00000003410	-	99	33.929	ENSCLAG00000003630	SRFBP1	75	69.697	Chinchilla_lanigera
ENSXCOG00000003410	-	99	38.415	ENSCGRG00001000718	Srfbp1	97	37.678	Cricetulus_griseus_chok1gshd
ENSXCOG00000003410	-	96	36.765	ENSCGRG00000010837	Srfbp1	99	36.000	Cricetulus_griseus_crigri
ENSXCOG00000003410	-	83	85.366	ENSCSEG00000011789	-	93	63.077	Cynoglossus_semilaevis
ENSXCOG00000003410	-	86	75.714	ENSCVAG00000013010	-	98	74.242	Cyprinodon_variegatus
ENSXCOG00000003410	-	78	53.797	ENSDARG00000075323	srfbp1	75	53.797	Danio_rerio
ENSXCOG00000003410	-	80	33.499	ENSDNOG00000017733	SRFBP1	99	31.920	Dasypus_novemcinctus
ENSXCOG00000003410	-	80	30.673	ENSETEG00000012408	SRFBP1	99	31.078	Echinops_telfairi
ENSXCOG00000003410	-	70	42.149	ENSEBUG00000007806	SRFBP1	60	42.149	Eptatretus_burgeri
ENSXCOG00000003410	-	98	39.468	ENSEASG00005012421	SRFBP1	66	45.455	Equus_asinus_asinus
ENSXCOG00000003410	-	98	39.139	ENSECAG00000015330	SRFBP1	66	45.118	Equus_caballus
ENSXCOG00000003410	-	98	36.492	ENSEEUG00000011514	SRFBP1	73	73.529	Erinaceus_europaeus
ENSXCOG00000003410	-	72	40.633	ENSELUG00000018381	-	97	39.130	Esox_lucius
ENSXCOG00000003410	-	96	33.947	ENSFALG00000007595	SRFBP1	99	33.470	Ficedula_albicollis
ENSXCOG00000003410	-	99	33.943	ENSFDAG00000005102	SRFBP1	73	78.571	Fukomys_damarensis
ENSXCOG00000003410	-	99	67.807	ENSFHEG00000000477	-	86	64.471	Fundulus_heteroclitus
ENSXCOG00000003410	-	98	34.756	ENSGALG00000005316	SRFBP1	86	77.419	Gallus_gallus
ENSXCOG00000003410	-	99	91.441	ENSGAFG00000018777	-	87	91.561	Gambusia_affinis
ENSXCOG00000003410	-	98	45.359	ENSGACG00000009055	-	83	45.053	Gasterosteus_aculeatus
ENSXCOG00000003410	-	96	37.910	ENSGAGG00000024915	SRFBP1	99	36.701	Gopherus_agassizii
ENSXCOG00000003410	-	99	38.235	ENSGGOG00000007725	SRFBP1	75	67.647	Gorilla_gorilla
ENSXCOG00000003410	-	99	48.555	ENSHCOG00000020644	-	83	48.828	Hippocampus_comes
ENSXCOG00000003410	-	99	37.298	ENSSTOG00000029184	SRFBP1	97	35.903	Ictidomys_tridecemlineatus
ENSXCOG00000003410	-	79	65.789	ENSJJAG00000013229	Srfbp1	76	60.976	Jaculus_jaculus
ENSXCOG00000003410	-	98	49.688	ENSLBEG00000013924	-	95	47.228	Labrus_bergylta
ENSXCOG00000003410	-	99	39.364	ENSLOCG00000008772	SRFBP1	99	39.364	Lepisosteus_oculatus
ENSXCOG00000003410	-	98	37.945	ENSLAFG00000015303	SRFBP1	96	38.737	Loxodonta_africana
ENSXCOG00000003410	-	73	57.895	ENSMFAG00000031263	SRFBP1	75	67.647	Macaca_fascicularis
ENSXCOG00000003410	-	73	57.895	ENSMMUG00000021009	SRFBP1	75	67.647	Macaca_mulatta
ENSXCOG00000003410	-	73	57.143	ENSMNEG00000040870	SRFBP1	75	67.647	Macaca_nemestrina
ENSXCOG00000003410	-	98	50.101	ENSMAMG00000004632	-	86	50.593	Mastacembelus_armatus
ENSXCOG00000003410	-	99	55.172	ENSMZEG00005000432	-	88	52.047	Maylandia_zebra
ENSXCOG00000003410	-	72	54.688	ENSMAUG00000009431	Srfbp1	97	36.605	Mesocricetus_auratus
ENSXCOG00000003410	-	99	37.652	ENSMICG00000042923	SRFBP1	77	61.905	Microcebus_murinus
ENSXCOG00000003410	-	98	38.571	ENSMOCG00000006206	Srfbp1	96	39.139	Microtus_ochrogaster
ENSXCOG00000003410	-	98	46.296	ENSMMOG00000021202	-	96	50.518	Mola_mola
ENSXCOG00000003410	-	99	37.045	ENSMODG00000013487	-	88	70.968	Monodelphis_domestica
ENSXCOG00000003410	-	99	54.990	ENSMALG00000001812	-	88	55.842	Monopterus_albus
ENSXCOG00000003410	-	99	37.008	MGP_CAROLIEiJ_G0022271	Srfbp1	97	38.900	Mus_caroli
ENSXCOG00000003410	-	99	39.148	ENSMUSG00000024528	Srfbp1	75	65.000	Mus_musculus
ENSXCOG00000003410	-	99	38.105	MGP_PahariEiJ_G0019004	Srfbp1	97	38.259	Mus_pahari
ENSXCOG00000003410	-	99	40.080	MGP_SPRETEiJ_G0023184	Srfbp1	97	40.964	Mus_spretus
ENSXCOG00000003410	-	96	37.053	ENSMPUG00000013031	SRFBP1	99	36.674	Mustela_putorius_furo
ENSXCOG00000003410	-	99	37.778	ENSMLUG00000009984	SRFBP1	99	35.992	Myotis_lucifugus
ENSXCOG00000003410	-	97	33.065	ENSNGAG00000013229	Srfbp1	73	59.091	Nannospalax_galili
ENSXCOG00000003410	-	99	51.148	ENSNBRG00000001146	-	98	51.148	Neolamprologus_brichardi
ENSXCOG00000003410	-	99	38.124	ENSNLEG00000011949	SRFBP1	67	43.377	Nomascus_leucogenys
ENSXCOG00000003410	-	96	35.091	ENSODEG00000007258	SRFBP1	99	34.082	Octodon_degus
ENSXCOG00000003410	-	87	35.011	ENSOANG00000010042	-	98	33.180	Ornithorhynchus_anatinus
ENSXCOG00000003410	-	66	42.683	ENSOCUG00000009556	SRFBP1	67	41.860	Oryctolagus_cuniculus
ENSXCOG00000003410	-	99	49.409	ENSORLG00000014234	-	87	49.209	Oryzias_latipes
ENSXCOG00000003410	-	98	44.216	ENSORLG00020020129	-	87	47.004	Oryzias_latipes_hni
ENSXCOG00000003410	-	98	49.469	ENSORLG00015000238	-	97	49.260	Oryzias_latipes_hsok
ENSXCOG00000003410	-	98	37.628	ENSOGAG00000032423	SRFBP1	99	38.193	Otolemur_garnettii
ENSXCOG00000003410	-	99	35.785	ENSPANG00000003799	SRFBP1	75	67.647	Papio_anubis
ENSXCOG00000003410	-	98	40.079	ENSPKIG00000024291	-	99	40.519	Paramormyrops_kingsleyae
ENSXCOG00000003410	-	98	36.756	ENSPSIG00000010650	SRFBP1	87	83.871	Pelodiscus_sinensis
ENSXCOG00000003410	-	99	45.200	ENSPMGG00000001675	-	98	48.140	Periophthalmus_magnuspinnatus
ENSXCOG00000003410	-	99	80.042	ENSPFOG00000005272	-	87	79.958	Poecilia_formosa
ENSXCOG00000003410	-	99	88.819	ENSPLAG00000018282	-	88	88.819	Poecilia_latipinna
ENSXCOG00000003410	-	99	87.975	ENSPMEG00000020184	-	88	87.975	Poecilia_mexicana
ENSXCOG00000003410	-	99	70.947	ENSPREG00000017248	-	99	72.421	Poecilia_reticulata
ENSXCOG00000003410	-	99	38.477	ENSPPYG00000015714	SRFBP1	67	43.234	Pongo_abelii
ENSXCOG00000003410	-	99	53.021	ENSPNYG00000010355	-	99	47.879	Pundamilia_nyererei
ENSXCOG00000003410	-	73	58.015	ENSPNAG00000029666	srfbp1	90	58.015	Pygocentrus_nattereri
ENSXCOG00000003410	-	72	54.198	ENSRNOG00000014808	Srfbp1	76	57.778	Rattus_norvegicus
ENSXCOG00000003410	-	99	39.000	ENSSBOG00000015464	-	67	44.554	Saimiri_boliviensis_boliviensis
ENSXCOG00000003410	-	99	35.960	ENSSHAG00000016003	SRFBP1	89	67.647	Sarcophilus_harrisii
ENSXCOG00000003410	-	99	41.650	ENSSFOG00015001274	srfbp1	99	41.517	Scleropages_formosus
ENSXCOG00000003410	-	99	51.085	ENSSMAG00000020630	-	84	51.889	Scophthalmus_maximus
ENSXCOG00000003410	-	99	56.048	ENSSDUG00000001828	-	85	56.301	Seriola_dumerili
ENSXCOG00000003410	-	99	37.945	ENSSARG00000010669	SRFBP1	67	45.928	Sorex_araneus
ENSXCOG00000003410	-	97	36.025	ENSSPUG00000009204	SRFBP1	99	36.420	Sphenodon_punctatus
ENSXCOG00000003410	-	99	55.792	ENSSPAG00000010728	-	84	58.661	Stegastes_partitus
ENSXCOG00000003410	-	98	37.854	ENSSSCG00000022656	SRFBP1	98	37.195	Sus_scrofa
ENSXCOG00000003410	-	99	50.830	ENSTNIG00000009267	-	97	50.625	Tetraodon_nigroviridis
ENSXCOG00000003410	-	96	38.641	ENSUAMG00000016707	SRFBP1	74	67.647	Ursus_americanus
ENSXCOG00000003410	-	98	33.473	ENSUMAG00000018340	SRFBP1	75	67.647	Ursus_maritimus
ENSXCOG00000003410	-	99	39.148	ENSVPAG00000005714	SRFBP1	99	38.664	Vicugna_pacos
ENSXCOG00000003410	-	99	39.228	ENSVVUG00000019178	SRFBP1	99	38.163	Vulpes_vulpes
ENSXCOG00000003410	-	98	36.162	ENSXETG00000004681	srfbp1	99	35.108	Xenopus_tropicalis
ENSXCOG00000003410	-	99	97.286	ENSXMAG00000026251	-	87	97.286	Xiphophorus_maculatus