EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000003441 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
12429 bases
Position
chrKQ557202.1:8584926-8597354
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3417
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3427
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3437
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3447
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3457
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3467
ENSXCOP00000004358zf-C2H2PF00096.266.3e-3477
ENSXCOP00000004356zf-C2H2PF00096.263.2e-1913
ENSXCOP00000004356zf-C2H2PF00096.263.2e-1923
ENSXCOP00000004356zf-C2H2PF00096.263.2e-1933
ENSXCOP00000004362zf-C2H2PF00096.262.7e-1513
ENSXCOP00000004362zf-C2H2PF00096.262.7e-1523
ENSXCOP00000004362zf-C2H2PF00096.262.7e-1533
ENSXCOP00000004358zf-metPF12874.71.7e-0912
ENSXCOP00000004358zf-metPF12874.71.7e-0922
ENSXCOP00000004356zf-metPF12874.71.3e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000004409-1041-ENSXCOP00000004356346 (aa)--
ENSXCOT00000004415-1281-ENSXCOP00000004362426 (aa)--
ENSXCOT00000004411-1302-ENSXCOP00000004358433 (aa)--
Gene Model
Click here to download ENSXCOG00000003441's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003441's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000003441-8646.154ENSXCOG00000007529-9846.250
ENSXCOG00000003441-7041.270ENSXCOG00000007957-9242.241
ENSXCOG00000003441-6045.882ENSXCOG00000015312-9047.407
ENSXCOG00000003441-8247.802ENSXCOG00000003451-9449.351
ENSXCOG00000003441-5944.000ENSXCOG00000009665-8444.000
ENSXCOG00000003441-5840.336ENSXCOG00000009668-8943.590
ENSXCOG00000003441-8645.665ENSXCOG00000000528-9845.665
ENSXCOG00000003441-5743.558ENSXCOG00000007413-6341.667
ENSXCOG00000003441-8642.424ENSXCOG00000007414-9841.497
ENSXCOG00000003441-9245.370ENSXCOG00000016567-8945.370
ENSXCOG00000003441-9039.583ENSXCOG00000009785-8339.583
ENSXCOG00000003441-8441.463ENSXCOG00000009781-9441.463
ENSXCOG00000003441-5836.111ENSXCOG00000007499zbtb416536.111
ENSXCOG00000003441-8646.259ENSXCOG00000011725-9745.270
ENSXCOG00000003441-8347.143ENSXCOG00000007981-9640.441
ENSXCOG00000003441-8642.029ENSXCOG00000007987-9942.373
ENSXCOG00000003441-9043.972ENSXCOG00000012458-10043.972
ENSXCOG00000003441-7143.200ENSXCOG00000003468-9746.622
ENSXCOG00000003441-9046.703ENSXCOG00000010488-8146.703
ENSXCOG00000003441-5734.979ENSXCOG00000015947-9040.404
ENSXCOG00000003441-5944.693ENSXCOG00000001292-8544.693
ENSXCOG00000003441-5741.935ENSXCOG00000012924-9841.935
ENSXCOG00000003441-8743.363ENSXCOG00000012921-9843.363
ENSXCOG00000003441-7140.833ENSXCOG00000002857-9742.188
ENSXCOG00000003441-9745.946ENSXCOG00000016860-9945.946
ENSXCOG00000003441-6239.303ENSXCOG00000017871zgc:1133436443.448
ENSXCOG00000003441-6836.275ENSXCOG00000015084snai26637.000
ENSXCOG00000003441-6045.833ENSXCOG00000010567-9845.299
ENSXCOG00000003441-7636.293ENSXCOG00000018117znf710b6137.778
ENSXCOG00000003441-5938.494ENSXCOG00000006553-8539.189
ENSXCOG00000003441-6657.100ENSXCOG00000003435-9659.477
ENSXCOG00000003441-6944.286ENSXCOG00000003431-9544.286
ENSXCOG00000003441-7363.265ENSXCOG00000003438-9967.843
ENSXCOG00000003441-5938.182ENSXCOG00000002714-7738.182
ENSXCOG00000003441-5845.146ENSXCOG00000016117-10045.146
ENSXCOG00000003441-6040.594ENSXCOG00000009777-6340.594
ENSXCOG00000003441-7036.486ENSXCOG00000009772-9536.486
ENSXCOG00000003441-8444.275ENSXCOG00000001226-9444.828
ENSXCOG00000003441-5735.465ENSXCOG00000010948-7035.593
ENSXCOG00000003441-7536.036ENSXCOG00000013213-9436.036
ENSXCOG00000003441-5640.206ENSXCOG00000009992zbtb47b8240.206
ENSXCOG00000003441-6341.146ENSXCOG00000018253-9241.146
ENSXCOG00000003441-7744.086ENSXCOG00000013066-8844.444
ENSXCOG00000003441-5747.059ENSXCOG00000000036znf3415947.059
ENSXCOG00000003441-9038.587ENSXCOG00000006614-9643.939
ENSXCOG00000003441-5944.944ENSXCOG00000008062-9945.349
ENSXCOG00000003441-9342.537ENSXCOG00000014363-9740.523
ENSXCOG00000003441-8541.441ENSXCOG00000014360-9640.351
ENSXCOG00000003441-9543.046ENSXCOG00000014361-9943.046
ENSXCOG00000003441-5334.586ENSXCOG00000014367scrt26331.206
ENSXCOG00000003441-8446.269ENSXCOG00000010507-6446.269
ENSXCOG00000003441-5841.429ENSXCOG00000007076-9941.429
ENSXCOG00000003441-5847.015ENSXCOG00000019457-9846.471
ENSXCOG00000003441-9246.903ENSXCOG00000019443-9846.154
ENSXCOG00000003441-9241.892ENSXCOG00000007406-9844.444
ENSXCOG00000003441-8745.000ENSXCOG00000009003-9350.442
ENSXCOG00000003441-6641.969ENSXCOG00000003093-9641.509
ENSXCOG00000003441-6243.043ENSXCOG00000007139-7442.857
ENSXCOG00000003441-7140.704ENSXCOG00000001200-9944.000
ENSXCOG00000003441-7234.074ENSXCOG00000009794-9240.984
ENSXCOG00000003441-9244.538ENSXCOG00000009798-9744.538
ENSXCOG00000003441-5333.775ENSXCOG00000019861-5733.775
ENSXCOG00000003441-5838.384ENSXCOG00000005697-9438.384
ENSXCOG00000003441-9045.402ENSXCOG00000007994-10042.857
ENSXCOG00000003441-5943.363ENSXCOG00000010576-7743.363
ENSXCOG00000003441-6141.228ENSXCOG00000019377-9741.379
ENSXCOG00000003441-9338.806ENSXCOG00000008056-7037.705
ENSXCOG00000003441-7641.339ENSXCOG00000015441-9445.161
ENSXCOG00000003441-6841.489ENSXCOG00000016307-9342.593
ENSXCOG00000003441-7842.342ENSXCOG00000002869-6633.564
ENSXCOG00000003441-6438.776ENSXCOG00000019481-9047.143
ENSXCOG00000003441-6040.000ENSXCOG00000019482-9243.519
ENSXCOG00000003441-6245.614ENSXCOG00000019484-9444.444
ENSXCOG00000003441-8745.522ENSXCOG00000003493-9655.696
ENSXCOG00000003441-9141.497ENSXCOG00000003499-9441.497
ENSXCOG00000003441-7637.647ENSXCOG00000019149znf5266537.647
ENSXCOG00000003441-6244.667ENSXCOG00000008978-9742.857
ENSXCOG00000003441-9843.038ENSXCOG00000013004-9845.455
ENSXCOG00000003441-7539.111ENSXCOG00000019401-9443.182
ENSXCOG00000003441-7445.294ENSXCOG00000007368-9944.531
ENSXCOG00000003441-8646.053ENSXCOG00000001116-9946.053
ENSXCOG00000003441-6243.243ENSXCOG00000013306-8643.243
ENSXCOG00000003441-5745.000ENSXCOG00000007945-9445.000
ENSXCOG00000003441-5841.341ENSXCOG00000007941-8541.341
ENSXCOG00000003441-6239.316ENSXCOG00000020768-7139.316
ENSXCOG00000003441-7045.714ENSXCOG00000002512-8647.015
ENSXCOG00000003441-9155.882ENSXCOG00000008908-7654.734
ENSXCOG00000003441-5946.667ENSXCOG00000010950si:dkey-210j14.38246.667
ENSXCOG00000003441-6544.737ENSXCOG00000019382-7747.126
ENSXCOG00000003441-8343.814ENSXCOG00000008083-9544.022
ENSXCOG00000003441-9641.892ENSXCOG00000003896-9441.892
ENSXCOG00000003441-5840.816ENSXCOG00000007396-8440.816
ENSXCOG00000003441-7445.946ENSXCOG00000002898-9145.946
ENSXCOG00000003441-8444.444ENSXCOG00000017328-9547.552
ENSXCOG00000003441-7237.594ENSXCOG00000019675scrt1b7938.095
ENSXCOG00000003441-5642.308ENSXCOG00000009186-9342.308
ENSXCOG00000003441-7938.372ENSXCOG00000009597ZNF3198038.372
ENSXCOG00000003441-8742.640ENSXCOG00000007979-9046.610
ENSXCOG00000003441-8555.072ENSXCOG00000003472-9355.072
ENSXCOG00000003441-5831.690ENSXCOG00000003001-8738.596
ENSXCOG00000003441-8447.009ENSXCOG00000007937-9047.009
ENSXCOG00000003441-8240.805ENSXCOG00000003537-9940.805
ENSXCOG00000003441-8542.857ENSXCOG00000003532-10041.667
ENSXCOG00000003441-7247.619ENSXCOG00000003530-9547.059
ENSXCOG00000003441-8346.154ENSXCOG00000003538-10046.552
ENSXCOG00000003441-5745.082ENSXCOG00000006951-8245.082
ENSXCOG00000003441-5740.252ENSXCOG00000010259-7940.252
ENSXCOG00000003441-6537.956ENSXCOG00000013787-6137.956
ENSXCOG00000003441-6339.252ENSXCOG00000010422-6138.372
ENSXCOG00000003441-5738.012ENSXCOG00000013870-7238.655
ENSXCOG00000003441-7242.857ENSXCOG00000019492-9642.857
ENSXCOG00000003441-6647.143ENSXCOG00000000354-8447.143
ENSXCOG00000003441-9036.842ENSXCOG00000009997-9936.842
ENSXCOG00000003441-5735.656ENSXCOG00000008567prdm57740.909
ENSXCOG00000003441-9644.162ENSXCOG00000003484-8641.270
ENSXCOG00000003441-6632.946ENSXCOG00000009768-7542.623
ENSXCOG00000003441-6939.474ENSXCOG00000001645si:dkey-89b17.45940.000
ENSXCOG00000003441-5647.312ENSXCOG00000000254-7541.935
ENSXCOG00000003441-6941.176ENSXCOG00000007376-9842.282
ENSXCOG00000003441-8543.827ENSXCOG00000002473-9943.827
ENSXCOG00000003441-9339.320ENSXCOG00000008116-9641.830
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000003441-9439.224ENSAPOG00000019138-7839.224Acanthochromis_polyacanthus
ENSXCOG00000003441-5438.462ENSAPOG00000008319-5538.462Acanthochromis_polyacanthus
ENSXCOG00000003441-8346.914ENSAPOG00000018429-8646.914Acanthochromis_polyacanthus
ENSXCOG00000003441-6938.318ENSACIG00000006826-6643.750Amphilophus_citrinellus
ENSXCOG00000003441-9342.276ENSACIG00000007464-8446.809Amphilophus_citrinellus
ENSXCOG00000003441-5433.333ENSACIG00000002944-5133.333Amphilophus_citrinellus
ENSXCOG00000003441-5838.286ENSACIG00000017892-7136.885Amphilophus_citrinellus
ENSXCOG00000003441-9231.924ENSAOCG00000016897-8638.983Amphiprion_ocellaris
ENSXCOG00000003441-6637.895ENSAOCG00000001325-7837.895Amphiprion_ocellaris
ENSXCOG00000003441-6138.462ENSAOCG00000015944-7338.462Amphiprion_ocellaris
ENSXCOG00000003441-6138.462ENSAOCG00000014769-8038.462Amphiprion_ocellaris
ENSXCOG00000003441-9531.532ENSAPEG00000018762-7239.844Amphiprion_percula
ENSXCOG00000003441-9231.712ENSAPEG00000001556-8638.983Amphiprion_percula
ENSXCOG00000003441-8935.160ENSAPEG00000010013-7340.288Amphiprion_percula
ENSXCOG00000003441-6238.298ENSATEG00000018931-8837.692Anabas_testudineus
ENSXCOG00000003441-5747.761ENSACLG00000011658-7545.000Astatotilapia_calliptera
ENSXCOG00000003441-7935.754ENSACLG00000005694-8040.816Astatotilapia_calliptera
ENSXCOG00000003441-5634.946ENSAMXG00000029518-5449.057Astyanax_mexicanus
ENSXCOG00000003441-6138.514ENSCING00000002128zf(c2h2)-356238.739Ciona_intestinalis
ENSXCOG00000003441-9145.714ENSCSEG00000010453-8745.714Cynoglossus_semilaevis
ENSXCOG00000003441-9042.568ENSCSEG00000008525-8639.310Cynoglossus_semilaevis
ENSXCOG00000003441-9042.478ENSCSEG00000008528-8940.678Cynoglossus_semilaevis
ENSXCOG00000003441-5650.617ENSCSEG00000015593-7453.086Cynoglossus_semilaevis
ENSXCOG00000003441-8642.647ENSCVAG00000006484-7439.655Cyprinodon_variegatus
ENSXCOG00000003441-6739.370ENSCVAG00000003250-7239.370Cyprinodon_variegatus
ENSXCOG00000003441-5647.445ENSCVAG00000015616-8442.958Cyprinodon_variegatus
ENSXCOG00000003441-7243.571ENSCVAG00000006653-8943.571Cyprinodon_variegatus
ENSXCOG00000003441-6543.333ENSCVAG00000012682-8143.333Cyprinodon_variegatus
ENSXCOG00000003441-6238.788ENSEBUG00000002290-5338.788Eptatretus_burgeri
ENSXCOG00000003441-5740.994ENSEBUG00000007931-6440.714Eptatretus_burgeri
ENSXCOG00000003441-5943.269ENSELUG00000024007-7442.222Esox_lucius
ENSXCOG00000003441-7942.331ENSELUG00000012088-6142.331Esox_lucius
ENSXCOG00000003441-8843.056ENSELUG00000020882-9438.686Esox_lucius
ENSXCOG00000003441-7035.294ENSELUG00000001909-8335.294Esox_lucius
ENSXCOG00000003441-9442.188ENSFHEG00000023184-8542.188Fundulus_heteroclitus
ENSXCOG00000003441-8830.901ENSGAFG00000012545-7130.901Gambusia_affinis
ENSXCOG00000003441-8943.038ENSGAFG00000008204-9543.038Gambusia_affinis
ENSXCOG00000003441-5442.268ENSGAFG00000007528-6836.364Gambusia_affinis
ENSXCOG00000003441-8943.609ENSGAFG00000001879-9543.609Gambusia_affinis
ENSXCOG00000003441-7832.051ENSHBUG00000006656-5641.304Haplochromis_burtoni
ENSXCOG00000003441-6244.944ENSHCOG00000020670-9044.944Hippocampus_comes
ENSXCOG00000003441-8838.342ENSHCOG00000019389-7738.342Hippocampus_comes
ENSXCOG00000003441-8641.837ENSHCOG00000008227-7341.837Hippocampus_comes
ENSXCOG00000003441-5741.453ENSHCOG00000013489-9840.566Hippocampus_comes
ENSXCOG00000003441-5946.703ENSHCOG00000015497-7646.703Hippocampus_comes
ENSXCOG00000003441-8542.564ENSHCOG00000001873-8443.262Hippocampus_comes
ENSXCOG00000003441-8542.564ENSHCOG00000008550-8443.262Hippocampus_comes
ENSXCOG00000003441-9243.939ENSHCOG00000008213-7943.939Hippocampus_comes
ENSXCOG00000003441-5632.903ENSIPUG00000024004-8432.903Ictalurus_punctatus
ENSXCOG00000003441-7434.211ENSKMAG00000007699-8334.211Kryptolebias_marmoratus
ENSXCOG00000003441-8430.435ENSKMAG00000021873-7730.435Kryptolebias_marmoratus
ENSXCOG00000003441-5738.164ENSLBEG00000007106-7138.164Labrus_bergylta
ENSXCOG00000003441-8544.311ENSLBEG00000011210-6944.311Labrus_bergylta
ENSXCOG00000003441-8540.000ENSLBEG00000006161-9040.000Labrus_bergylta
ENSXCOG00000003441-6834.356ENSLBEG00000001132-8434.356Labrus_bergylta
ENSXCOG00000003441-5837.870ENSLBEG00000017424-9537.870Labrus_bergylta
ENSXCOG00000003441-6943.452ENSLOCG00000004208-9943.452Lepisosteus_oculatus
ENSXCOG00000003441-8536.207ENSMAMG00000017939-9440.984Mastacembelus_armatus
ENSXCOG00000003441-6536.875ENSMZEG00005013907-7141.912Maylandia_zebra
ENSXCOG00000003441-9449.573ENSMMOG00000017592-7250.794Mola_mola
ENSXCOG00000003441-5736.970ENSMALG00000004279-8737.209Monopterus_albus
ENSXCOG00000003441-8442.697ENSNBRG00000006112-6543.820Neolamprologus_brichardi
ENSXCOG00000003441-6835.393ENSONIG00000007967-6337.607Oreochromis_niloticus
ENSXCOG00000003441-6230.137ENSONIG00000005050-8834.641Oreochromis_niloticus
ENSXCOG00000003441-6637.634ENSORLG00000021885-7241.063Oryzias_latipes
ENSXCOG00000003441-6243.939ENSORLG00000002268-9438.136Oryzias_latipes
ENSXCOG00000003441-8540.361ENSORLG00020018921-9340.361Oryzias_latipes_hni
ENSXCOG00000003441-6445.902ENSORLG00020019227-5646.552Oryzias_latipes_hni
ENSXCOG00000003441-6639.286ENSORLG00015018099-7039.837Oryzias_latipes_hsok
ENSXCOG00000003441-5635.780ENSOMEG00000005578-6936.667Oryzias_melastigma
ENSXCOG00000003441-6241.558ENSPMGG00000002455-9441.558Periophthalmus_magnuspinnatus
ENSXCOG00000003441-5631.707ENSPMGG00000019750-7839.062Periophthalmus_magnuspinnatus
ENSXCOG00000003441-5843.860ENSPMGG00000002659-9143.860Periophthalmus_magnuspinnatus
ENSXCOG00000003441-7939.200ENSPMGG00000009571-8739.241Periophthalmus_magnuspinnatus
ENSXCOG00000003441-6740.854ENSPMGG00000007051-6941.212Periophthalmus_magnuspinnatus
ENSXCOG00000003441-9146.429ENSPMGG00000002661-9146.429Periophthalmus_magnuspinnatus
ENSXCOG00000003441-5241.414ENSPMAG00000000839-9941.414Petromyzon_marinus
ENSXCOG00000003441-5735.088ENSPMAG00000002022-10035.088Petromyzon_marinus
ENSXCOG00000003441-5335.393ENSPMAG00000004189-9840.244Petromyzon_marinus
ENSXCOG00000003441-6039.157ENSPFOG00000018860-9939.316Poecilia_formosa
ENSXCOG00000003441-9144.828ENSPFOG00000009491-8139.583Poecilia_formosa
ENSXCOG00000003441-6339.344ENSPLAG00000008941-8439.344Poecilia_latipinna
ENSXCOG00000003441-6033.735ENSPLAG00000014832-7638.793Poecilia_latipinna
ENSXCOG00000003441-9541.538ENSPLAG00000010067-9041.538Poecilia_latipinna
ENSXCOG00000003441-6033.735ENSPMEG00000005210-7638.793Poecilia_mexicana
ENSXCOG00000003441-8237.063ENSPMEG00000002953-8437.063Poecilia_mexicana
ENSXCOG00000003441-9144.828ENSPMEG00000024117-8139.583Poecilia_mexicana
ENSXCOG00000003441-8738.710ENSPREG00000008907-6938.710Poecilia_reticulata
ENSXCOG00000003441-5741.667ENSPREG00000009488-9641.584Poecilia_reticulata
ENSXCOG00000003441-5939.496ENSPREG00000002603-6939.496Poecilia_reticulata
ENSXCOG00000003441-5840.909ENSPNYG00000017888-5440.909Pundamilia_nyererei
ENSXCOG00000003441-6737.736ENSPNAG00000005946-9536.735Pygocentrus_nattereri
ENSXCOG00000003441-5838.679ENSSFOG00015011531-8041.667Scleropages_formosus
ENSXCOG00000003441-5737.736ENSSMAG00000008308-6837.736Scophthalmus_maximus
ENSXCOG00000003441-8335.021ENSSMAG00000013291-9142.958Scophthalmus_maximus
ENSXCOG00000003441-7144.578ENSSMAG00000004259-8140.244Scophthalmus_maximus
ENSXCOG00000003441-6344.068ENSSDUG00000000905-7144.068Seriola_dumerili
ENSXCOG00000003441-9144.086ENSSDUG00000020774-8545.669Seriola_dumerili
ENSXCOG00000003441-6036.723ENSSLDG00000011849-6436.723Seriola_lalandi_dorsalis
ENSXCOG00000003441-6036.364ENSSLDG00000014436-7135.625Seriola_lalandi_dorsalis
ENSXCOG00000003441-6834.862ENSSPAG00000011544-9140.397Stegastes_partitus
ENSXCOG00000003441-7842.857ENSSPAG00000005770-7842.857Stegastes_partitus
ENSXCOG00000003441-5940.411ENSSPAG00000011533-7744.444Stegastes_partitus
ENSXCOG00000003441-5940.476ENSXETG00000012506znf919940.476Xenopus_tropicalis
ENSXCOG00000003441-6133.735ENSXMAG00000012936-8133.735Xiphophorus_maculatus

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