EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003455 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 32771 bases
Position: chrKQ557205.1:23982089-24014859
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004396	tRNA-synt_1g	PF09334.11	5.5e-15	1	1
ENSXCOP00000004396	Anticodon_1	PF08264.13	3.4e-36	1	1
ENSXCOP00000004396	tRNA-synt_1	PF00133.22	2.6e-196	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004449	-	3102	-	ENSXCOP00000004396	1033 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003455	vars2	98	48.019	ENSXCOG00000019172	vars	78	49.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003455	vars2	94	80.508	ENSAPOG00000007396	vars2	97	78.042	Acanthochromis_polyacanthus
ENSXCOG00000003455	vars2	95	52.152	ENSAMEG00000012997	VARS2	87	53.575	Ailuropoda_melanoleuca
ENSXCOG00000003455	vars2	99	77.606	ENSACIG00000004344	vars2	97	77.606	Amphilophus_citrinellus
ENSXCOG00000003455	vars2	94	80.914	ENSAOCG00000000476	vars2	97	78.327	Amphiprion_ocellaris
ENSXCOG00000003455	vars2	94	80.914	ENSAPEG00000008646	vars2	95	78.327	Amphiprion_percula
ENSXCOG00000003455	vars2	96	80.417	ENSATEG00000012291	vars2	97	78.640	Anabas_testudineus
ENSXCOG00000003455	vars2	97	53.051	ENSACAG00000022093	VARS2	89	54.564	Anolis_carolinensis
ENSXCOG00000003455	vars2	97	50.680	ENSANAG00000038018	VARS2	89	52.917	Aotus_nancymaae
ENSXCOG00000003455	vars2	99	75.024	ENSACLG00000018673	vars2	97	75.024	Astatotilapia_calliptera
ENSXCOG00000003455	vars2	96	69.940	ENSAMXG00000017773	vars2	95	70.276	Astyanax_mexicanus
ENSXCOG00000003455	vars2	98	51.585	ENSBTAG00000010698	VARS2	90	53.965	Bos_taurus
ENSXCOG00000003455	vars2	95	51.610	ENSCJAG00000019826	VARS2	89	53.021	Callithrix_jacchus
ENSXCOG00000003455	vars2	95	52.753	ENSCAFG00000000454	VARS2	88	54.193	Canis_familiaris
ENSXCOG00000003455	vars2	86	56.236	ENSCAFG00020019387	VARS2	89	56.943	Canis_lupus_dingo
ENSXCOG00000003455	vars2	97	51.701	ENSCHIG00000007847	VARS2	89	53.782	Capra_hircus
ENSXCOG00000003455	vars2	95	52.663	ENSTSYG00000009904	VARS2	89	54.054	Carlito_syrichta
ENSXCOG00000003455	vars2	88	54.245	ENSCAPG00000017770	VARS2	96	54.245	Cavia_aperea
ENSXCOG00000003455	vars2	97	52.004	ENSCPOG00000021834	VARS2	90	53.649	Cavia_porcellus
ENSXCOG00000003455	vars2	95	51.811	ENSCCAG00000037907	VARS2	85	57.753	Cebus_capucinus
ENSXCOG00000003455	vars2	95	52.104	ENSCATG00000032554	VARS2	89	53.527	Cercocebus_atys
ENSXCOG00000003455	vars2	95	52.277	ENSCLAG00000002889	VARS2	88	54.526	Chinchilla_lanigera
ENSXCOG00000003455	vars2	95	52.305	ENSCSAG00000008327	VARS2	89	53.734	Chlorocebus_sabaeus
ENSXCOG00000003455	vars2	93	56.269	ENSCPBG00000021502	VARS2	87	64.832	Chrysemys_picta_bellii
ENSXCOG00000003455	vars2	95	52.004	ENSCANG00000014991	VARS2	88	53.423	Colobus_angolensis_palliatus
ENSXCOG00000003455	vars2	94	53.150	ENSCGRG00001021535	Vars2	88	54.632	Cricetulus_griseus_chok1gshd
ENSXCOG00000003455	vars2	94	53.150	ENSCGRG00000014112	Vars2	88	54.632	Cricetulus_griseus_crigri
ENSXCOG00000003455	vars2	86	83.544	ENSCSEG00000015432	vars2	93	74.232	Cynoglossus_semilaevis
ENSXCOG00000003455	vars2	67	85.411	ENSCVAG00000017765	vars2	98	85.411	Cyprinodon_variegatus
ENSXCOG00000003455	vars2	99	67.788	ENSDARG00000056717	vars2	97	67.788	Danio_rerio
ENSXCOG00000003455	vars2	78	51.589	ENSDORG00000008516	Vars2	89	51.589	Dipodomys_ordii
ENSXCOG00000003455	vars2	94	47.149	ENSETEG00000014844	VARS2	88	48.211	Echinops_telfairi
ENSXCOG00000003455	vars2	96	51.816	ENSEASG00005019997	VARS2	94	55.304	Equus_asinus_asinus
ENSXCOG00000003455	vars2	96	51.863	ENSECAG00000018202	VARS2	89	54.079	Equus_caballus
ENSXCOG00000003455	vars2	99	66.384	ENSELUG00000017824	vars2	97	66.290	Esox_lucius
ENSXCOG00000003455	vars2	97	52.008	ENSFCAG00000010531	VARS2	91	53.055	Felis_catus
ENSXCOG00000003455	vars2	98	51.250	ENSFDAG00000017216	VARS2	89	53.623	Fukomys_damarensis
ENSXCOG00000003455	vars2	97	81.311	ENSFHEG00000013932	vars2	100	81.311	Fundulus_heteroclitus
ENSXCOG00000003455	vars2	92	69.916	ENSGMOG00000018960	vars2	99	69.916	Gadus_morhua
ENSXCOG00000003455	vars2	94	95.173	ENSGAFG00000004737	vars2	98	95.173	Gambusia_affinis
ENSXCOG00000003455	vars2	93	79.193	ENSGACG00000001464	vars2	97	79.193	Gasterosteus_aculeatus
ENSXCOG00000003455	vars2	91	56.408	ENSGAGG00000011652	VARS2	95	56.408	Gopherus_agassizii
ENSXCOG00000003455	vars2	96	52.505	ENSGGOG00000014587	VARS2	89	53.942	Gorilla_gorilla
ENSXCOG00000003455	vars2	99	72.467	ENSHBUG00000002448	vars2	97	72.467	Haplochromis_burtoni
ENSXCOG00000003455	vars2	98	51.014	ENSHGLG00000012886	VARS2	87	52.863	Heterocephalus_glaber_female
ENSXCOG00000003455	vars2	98	50.918	ENSHGLG00100016535	VARS2	91	52.761	Heterocephalus_glaber_male
ENSXCOG00000003455	vars2	69	76.349	ENSHCOG00000017907	vars2	96	76.349	Hippocampus_comes
ENSXCOG00000003455	vars2	94	70.031	ENSIPUG00000015573	Vars2	95	68.996	Ictalurus_punctatus
ENSXCOG00000003455	vars2	97	51.074	ENSSTOG00000009924	VARS2	90	53.051	Ictidomys_tridecemlineatus
ENSXCOG00000003455	vars2	93	53.271	ENSJJAG00000011144	Vars2	90	53.375	Jaculus_jaculus
ENSXCOG00000003455	vars2	99	77.578	ENSKMAG00000001393	vars2	97	77.673	Kryptolebias_marmoratus
ENSXCOG00000003455	vars2	54	79.964	ENSLBEG00000005480	-	81	80.072	Labrus_bergylta
ENSXCOG00000003455	vars2	99	71.103	ENSLBEG00000011949	vars2	97	71.103	Labrus_bergylta
ENSXCOG00000003455	vars2	92	51.943	ENSLACG00000001576	-	94	51.463	Latimeria_chalumnae
ENSXCOG00000003455	vars2	97	51.498	ENSLAFG00000015183	VARS2	89	53.679	Loxodonta_africana
ENSXCOG00000003455	vars2	95	52.012	ENSMFAG00000042367	VARS2	89	53.438	Macaca_fascicularis
ENSXCOG00000003455	vars2	95	52.113	ENSMMUG00000018609	VARS2	89	53.542	Macaca_mulatta
ENSXCOG00000003455	vars2	95	52.012	ENSMNEG00000043163	VARS2	89	53.438	Macaca_nemestrina
ENSXCOG00000003455	vars2	95	52.367	ENSMLEG00000041728	VARS2	87	53.631	Mandrillus_leucophaeus
ENSXCOG00000003455	vars2	96	77.129	ENSMAMG00000020339	vars2	95	76.339	Mastacembelus_armatus
ENSXCOG00000003455	vars2	99	74.929	ENSMZEG00005017669	vars2	97	74.929	Maylandia_zebra
ENSXCOG00000003455	vars2	97	52.432	ENSMAUG00000018946	Vars2	90	54.132	Mesocricetus_auratus
ENSXCOG00000003455	vars2	84	55.056	ENSMICG00000005365	VARS2	92	58.171	Microcebus_murinus
ENSXCOG00000003455	vars2	97	47.642	ENSMOCG00000014607	Vars2	89	49.326	Microtus_ochrogaster
ENSXCOG00000003455	vars2	94	77.584	ENSMMOG00000012122	vars2	96	76.093	Mola_mola
ENSXCOG00000003455	vars2	96	50.834	ENSMODG00000015848	VARS2	87	52.947	Monodelphis_domestica
ENSXCOG00000003455	vars2	94	77.926	ENSMALG00000009217	vars2	97	77.926	Monopterus_albus
ENSXCOG00000003455	vars2	96	52.877	MGP_CAROLIEiJ_G0021529	Vars2	97	55.810	Mus_caroli
ENSXCOG00000003455	vars2	96	52.381	ENSMUSG00000038838	Vars2	93	57.143	Mus_musculus
ENSXCOG00000003455	vars2	96	52.900	MGP_PahariEiJ_G0020523	Vars2	93	57.143	Mus_pahari
ENSXCOG00000003455	vars2	96	52.480	MGP_SPRETEiJ_G0022436	Vars2	97	55.634	Mus_spretus
ENSXCOG00000003455	vars2	95	53.266	ENSMPUG00000011643	VARS2	88	54.632	Mustela_putorius_furo
ENSXCOG00000003455	vars2	95	51.530	ENSMLUG00000002356	VARS2	86	53.278	Myotis_lucifugus
ENSXCOG00000003455	vars2	95	48.695	ENSNGAG00000020607	Vars2	90	49.690	Nannospalax_galili
ENSXCOG00000003455	vars2	62	65.744	ENSNBRG00000001624	vars2	56	65.744	Neolamprologus_brichardi
ENSXCOG00000003455	vars2	96	51.683	ENSNLEG00000005625	VARS2	89	53.074	Nomascus_leucogenys
ENSXCOG00000003455	vars2	77	56.594	ENSMEUG00000014475	VARS2	84	56.594	Notamacropus_eugenii
ENSXCOG00000003455	vars2	84	54.891	ENSOPRG00000000682	VARS2	78	64.667	Ochotona_princeps
ENSXCOG00000003455	vars2	94	52.477	ENSODEG00000017965	VARS2	88	54.074	Octodon_degus
ENSXCOG00000003455	vars2	94	57.243	ENSONIG00000004734	vars2	97	57.243	Oreochromis_niloticus
ENSXCOG00000003455	vars2	73	58.824	ENSOANG00000000398	-	91	58.824	Ornithorhynchus_anatinus
ENSXCOG00000003455	vars2	97	48.303	ENSOCUG00000021496	VARS2	57	50.938	Oryctolagus_cuniculus
ENSXCOG00000003455	vars2	94	75.458	ENSORLG00000010632	vars2	97	72.306	Oryzias_latipes
ENSXCOG00000003455	vars2	94	75.458	ENSORLG00020018584	vars2	97	72.306	Oryzias_latipes_hni
ENSXCOG00000003455	vars2	94	75.255	ENSORLG00015010408	vars2	97	72.023	Oryzias_latipes_hsok
ENSXCOG00000003455	vars2	95	74.326	ENSOMEG00000008360	vars2	97	72.091	Oryzias_melastigma
ENSXCOG00000003455	vars2	95	52.419	ENSOGAG00000006087	VARS2	87	53.686	Otolemur_garnettii
ENSXCOG00000003455	vars2	97	51.165	ENSOARG00000010844	VARS2	88	53.209	Ovis_aries
ENSXCOG00000003455	vars2	96	52.505	ENSPPAG00000041141	VARS2	89	53.838	Pan_paniscus
ENSXCOG00000003455	vars2	97	52.059	ENSPPRG00000006751	VARS2	88	53.109	Panthera_pardus
ENSXCOG00000003455	vars2	97	51.961	ENSPTIG00000017799	VARS2	95	52.840	Panthera_tigris_altaica
ENSXCOG00000003455	vars2	96	52.505	ENSPTRG00000034497	VARS2	89	53.838	Pan_troglodytes
ENSXCOG00000003455	vars2	95	52.305	ENSPANG00000018481	VARS2	92	53.734	Papio_anubis
ENSXCOG00000003455	vars2	96	67.732	ENSPKIG00000011372	vars2	95	66.895	Paramormyrops_kingsleyae
ENSXCOG00000003455	vars2	61	61.950	ENSPSIG00000006206	VARS2	92	61.705	Pelodiscus_sinensis
ENSXCOG00000003455	vars2	97	72.468	ENSPMGG00000000465	vars2	95	72.468	Periophthalmus_magnuspinnatus
ENSXCOG00000003455	vars2	95	52.918	ENSPEMG00000014691	Vars2	90	54.206	Peromyscus_maniculatus_bairdii
ENSXCOG00000003455	vars2	97	51.423	ENSPCIG00000015040	VARS2	88	53.968	Phascolarctos_cinereus
ENSXCOG00000003455	vars2	97	90.117	ENSPFOG00000017616	vars2	94	90.117	Poecilia_formosa
ENSXCOG00000003455	vars2	99	89.800	ENSPLAG00000019778	vars2	97	89.800	Poecilia_latipinna
ENSXCOG00000003455	vars2	99	90.181	ENSPMEG00000011123	vars2	97	90.181	Poecilia_mexicana
ENSXCOG00000003455	vars2	99	81.905	ENSPREG00000014998	vars2	99	81.905	Poecilia_reticulata
ENSXCOG00000003455	vars2	94	53.001	ENSPPYG00000016424	VARS2	88	54.478	Pongo_abelii
ENSXCOG00000003455	vars2	66	53.500	ENSPCAG00000006946	VARS2	62	53.500	Procavia_capensis
ENSXCOG00000003455	vars2	97	50.194	ENSPCOG00000014839	VARS2	87	52.169	Propithecus_coquereli
ENSXCOG00000003455	vars2	95	51.652	ENSPVAG00000004197	VARS2	89	52.953	Pteropus_vampyrus
ENSXCOG00000003455	vars2	87	80.054	ENSPNYG00000010314	vars2	97	80.054	Pundamilia_nyererei
ENSXCOG00000003455	vars2	96	69.811	ENSPNAG00000026793	vars2	94	69.208	Pygocentrus_nattereri
ENSXCOG00000003455	vars2	96	52.187	ENSRNOG00000000833	Vars2	90	53.790	Rattus_norvegicus
ENSXCOG00000003455	vars2	95	52.204	ENSRBIG00000032725	VARS2	89	53.686	Rhinopithecus_bieti
ENSXCOG00000003455	vars2	95	52.104	ENSRROG00000043847	VARS2	89	53.527	Rhinopithecus_roxellana
ENSXCOG00000003455	vars2	95	50.640	ENSSBOG00000033240	VARS2	87	51.886	Saimiri_boliviensis_boliviensis
ENSXCOG00000003455	vars2	97	52.306	ENSSHAG00000009307	VARS2	89	54.211	Sarcophilus_harrisii
ENSXCOG00000003455	vars2	97	68.281	ENSSFOG00015016187	vars2	93	68.281	Scleropages_formosus
ENSXCOG00000003455	vars2	99	77.308	ENSSMAG00000020842	vars2	97	77.692	Scophthalmus_maximus
ENSXCOG00000003455	vars2	99	78.116	ENSSDUG00000011598	vars2	97	78.612	Seriola_dumerili
ENSXCOG00000003455	vars2	92	81.178	ENSSLDG00000015492	vars2	97	77.286	Seriola_lalandi_dorsalis
ENSXCOG00000003455	vars2	81	60.000	ENSSPUG00000014700	VARS2	87	60.000	Sphenodon_punctatus
ENSXCOG00000003455	vars2	99	76.834	ENSSPAG00000004654	vars2	97	76.834	Stegastes_partitus
ENSXCOG00000003455	vars2	96	53.175	ENSSSCG00000001384	VARS2	93	55.176	Sus_scrofa
ENSXCOG00000003455	vars2	94	74.949	ENSTRUG00000005264	vars2	92	74.949	Takifugu_rubripes
ENSXCOG00000003455	vars2	97	69.852	ENSTNIG00000005916	vars2	95	69.306	Tetraodon_nigroviridis
ENSXCOG00000003455	vars2	79	53.927	ENSTTRG00000012243	VARS2	75	62.162	Tursiops_truncatus
ENSXCOG00000003455	vars2	95	52.400	ENSUAMG00000026124	VARS2	95	54.443	Ursus_americanus
ENSXCOG00000003455	vars2	95	52.553	ENSUMAG00000019894	VARS2	89	53.646	Ursus_maritimus
ENSXCOG00000003455	vars2	95	52.653	ENSVVUG00000010754	VARS2	84	54.088	Vulpes_vulpes
ENSXCOG00000003455	vars2	93	52.103	ENSXETG00000003036	vars2	100	52.103	Xenopus_tropicalis
ENSXCOG00000003455	vars2	99	97.617	ENSXMAG00000013523	vars2	97	97.617	Xiphophorus_maculatus