EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000003512 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
10849 bases
Position
chrKQ557209.1:18858451-18869299
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000004445PARPPF00644.201.2e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000004498-1827-ENSXCOP00000004445608 (aa)--
Gene Model
Click here to download ENSXCOG00000003512's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003512's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000003512-8241.313ENSXCOG00000009933parp12a7840.952
ENSXCOG00000003512-5030.294ENSXCOG00000013837-6430.294
ENSXCOG00000003512-9280.674ENSXCOG00000003517-7884.398
ENSXCOG00000003512-8242.256ENSXCOG00000009904-7742.176
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000003512-8241.333ENSG00000059378PARP128859.701Homo_sapiens
ENSXCOG00000003512-8240.975ENSAPOG00000023485parp12a7741.516Acanthochromis_polyacanthus
ENSXCOG00000003512-8666.374ENSAPOG00000015327si:ch73-252i11.16069.575Acanthochromis_polyacanthus
ENSXCOG00000003512-8638.819ENSAMEG00000017865PARP127939.962Ailuropoda_melanoleuca
ENSXCOG00000003512-6463.520ENSACIG00000007422-7463.520Amphilophus_citrinellus
ENSXCOG00000003512-8958.439ENSACIG00000007478PARP127161.736Amphilophus_citrinellus
ENSXCOG00000003512-8648.964ENSACIG00000007539-7650.794Amphilophus_citrinellus
ENSXCOG00000003512-8242.610ENSACIG00000009637parp12a7642.418Amphilophus_citrinellus
ENSXCOG00000003512-8263.198ENSACIG00000007569-7462.813Amphilophus_citrinellus
ENSXCOG00000003512-8242.029ENSAOCG00000000472parp12a7742.048Amphiprion_ocellaris
ENSXCOG00000003512-8463.671ENSAOCG00000020326si:ch73-252i11.15963.969Amphiprion_ocellaris
ENSXCOG00000003512-8169.087ENSAPEG00000018306si:ch73-252i11.15569.668Amphiprion_percula
ENSXCOG00000003512-8241.667ENSAPEG00000002783parp12a7741.682Amphiprion_percula
ENSXCOG00000003512-8243.520ENSATEG00000017986parp12a7643.520Anabas_testudineus
ENSXCOG00000003512-8665.548ENSATEG00000005022si:ch73-252i11.15565.760Anabas_testudineus
ENSXCOG00000003512-8243.860ENSAPLG00000006979PARP129043.860Anas_platyrhynchos
ENSXCOG00000003512-8341.746ENSACAG00000016815PARP127641.366Anolis_carolinensis
ENSXCOG00000003512-8240.190ENSANAG00000027023PARP127440.000Aotus_nancymaae
ENSXCOG00000003512-8763.774ENSACLG00000008401PARP125867.529Astatotilapia_calliptera
ENSXCOG00000003512-8152.311ENSACLG00000008377PARP127452.126Astatotilapia_calliptera
ENSXCOG00000003512-8240.472ENSACLG00000005503parp12a7740.109Astatotilapia_calliptera
ENSXCOG00000003512-8268.894ENSACLG00000008412PARP125569.555Astatotilapia_calliptera
ENSXCOG00000003512-8244.163ENSAMXG00000001021parp12a7744.639Astyanax_mexicanus
ENSXCOG00000003512-8241.961ENSAMXG00000043787parp12a7542.300Astyanax_mexicanus
ENSXCOG00000003512-8844.727ENSAMXG00000000821-6047.255Astyanax_mexicanus
ENSXCOG00000003512-8257.282ENSAMXG00000018396si:ch73-252i11.16957.558Astyanax_mexicanus
ENSXCOG00000003512-8438.698ENSBTAG00000016546PARP127638.674Bos_taurus
ENSXCOG00000003512-8639.854ENSCJAG00000013351PARP127440.267Callithrix_jacchus
ENSXCOG00000003512-8239.777ENSCAFG00000003997PARP127439.887Canis_familiaris
ENSXCOG00000003512-8239.777ENSCAFG00020022200PARP127439.887Canis_lupus_dingo
ENSXCOG00000003512-8838.544ENSCHIG00000014673PARP127439.122Capra_hircus
ENSXCOG00000003512-8242.286ENSTSYG00000004008PARP128441.288Carlito_syrichta
ENSXCOG00000003512-8339.552ENSCAPG00000009108PARP128639.739Cavia_aperea
ENSXCOG00000003512-8341.620ENSCPOG00000011210PARP128741.431Cavia_porcellus
ENSXCOG00000003512-8241.524ENSCCAG00000032426PARP127440.952Cebus_capucinus
ENSXCOG00000003512-8240.607ENSCATG00000029372PARP127440.607Cercocebus_atys
ENSXCOG00000003512-8240.417ENSCLAG00000002012PARP128140.417Chinchilla_lanigera
ENSXCOG00000003512-8240.607ENSCSAG00000008282PARP127440.607Chlorocebus_sabaeus
ENSXCOG00000003512-8643.551ENSCPBG00000013389PARP127343.444Chrysemys_picta_bellii
ENSXCOG00000003512-8240.417ENSCANG00000034582PARP128540.417Colobus_angolensis_palliatus
ENSXCOG00000003512-8639.927ENSCGRG00001010916Parp127340.377Cricetulus_griseus_chok1gshd
ENSXCOG00000003512-8639.927ENSCGRG00000015998Parp128540.377Cricetulus_griseus_crigri
ENSXCOG00000003512-8958.263ENSCSEG00000015804si:ch73-252i11.15662.791Cynoglossus_semilaevis
ENSXCOG00000003512-8240.816ENSCSEG00000009223parp12a7741.002Cynoglossus_semilaevis
ENSXCOG00000003512-8239.138ENSCVAG00000016385parp12a7739.781Cyprinodon_variegatus
ENSXCOG00000003512-8241.058ENSCVAG00000016405parp12a7840.693Cyprinodon_variegatus
ENSXCOG00000003512-6465.729ENSDARG00000100660si:ch73-252i11.17565.729Danio_rerio
ENSXCOG00000003512-8240.417ENSDARG00000042496parp12a7640.734Danio_rerio
ENSXCOG00000003512-5746.341ENSDNOG00000009685-9446.341Dasypus_novemcinctus
ENSXCOG00000003512-8239.405ENSDORG00000009525Parp128239.925Dipodomys_ordii
ENSXCOG00000003512-9035.439ENSEBUG00000000742-7735.461Eptatretus_burgeri
ENSXCOG00000003512-5436.145ENSEBUG00000016305-5936.145Eptatretus_burgeri
ENSXCOG00000003512-8240.571ENSECAG00000022601PARP126140.417Equus_caballus
ENSXCOG00000003512-6852.964ENSEEUG00000002654PARP127052.549Erinaceus_europaeus
ENSXCOG00000003512-8245.562ENSELUG00000002966-6045.365Esox_lucius
ENSXCOG00000003512-8354.972ENSELUG00000004066si:ch73-252i11.17155.682Esox_lucius
ENSXCOG00000003512-8242.911ENSELUG00000019421parp12a7642.911Esox_lucius
ENSXCOG00000003512-8340.187ENSFCAG00000026388PARP125639.813Felis_catus
ENSXCOG00000003512-8242.582ENSFALG00000009061PARP128242.389Ficedula_albicollis
ENSXCOG00000003512-8539.279ENSFDAG00000021493PARP128240.038Fukomys_damarensis
ENSXCOG00000003512-8240.325ENSFHEG00000011844parp12a7740.659Fundulus_heteroclitus
ENSXCOG00000003512-7079.398ENSFHEG00000016439si:ch73-252i11.15380.907Fundulus_heteroclitus
ENSXCOG00000003512-8239.241ENSFHEG00000011833parp12a7839.241Fundulus_heteroclitus
ENSXCOG00000003512-8236.973ENSGMOG00000009778-5344.819Gadus_morhua
ENSXCOG00000003512-6349.624ENSGMOG00000016384-9949.624Gadus_morhua
ENSXCOG00000003512-6564.407ENSGMOG00000005467-6964.407Gadus_morhua
ENSXCOG00000003512-6948.630ENSGMOG00000004950-10053.102Gadus_morhua
ENSXCOG00000003512-7053.456ENSGMOG00000001046-9955.065Gadus_morhua
ENSXCOG00000003512-8149.395ENSGMOG00000010741-9049.395Gadus_morhua
ENSXCOG00000003512-8042.604ENSGALG00000046187PARP129743.750Gallus_gallus
ENSXCOG00000003512-8239.138ENSGAFG00000021877parp12a7739.455Gambusia_affinis
ENSXCOG00000003512-8639.826ENSGAFG00000021878parp12a9139.378Gambusia_affinis
ENSXCOG00000003512-8240.812ENSGACG00000013321parp12a7640.076Gasterosteus_aculeatus
ENSXCOG00000003512-9157.612ENSGACG00000019123si:ch73-252i11.16761.923Gasterosteus_aculeatus
ENSXCOG00000003512-8243.110ENSGAGG00000001030PARP127342.913Gopherus_agassizii
ENSXCOG00000003512-8241.143ENSGGOG00000000828PARP127640.571Gorilla_gorilla
ENSXCOG00000003512-8569.195ENSHBUG00000011345si:ch73-252i11.17070.258Haplochromis_burtoni
ENSXCOG00000003512-8240.109ENSHBUG00000017751parp12a7740.290Haplochromis_burtoni
ENSXCOG00000003512-8241.399ENSHGLG00000018555PARP127241.098Heterocephalus_glaber_female
ENSXCOG00000003512-8839.789ENSHGLG00100013923PARP128141.098Heterocephalus_glaber_male
ENSXCOG00000003512-8339.002ENSHCOG00000007607parp12a7339.372Hippocampus_comes
ENSXCOG00000003512-8242.436ENSIPUG00000014496-7542.209Ictalurus_punctatus
ENSXCOG00000003512-8953.381ENSIPUG00000005487si:ch73-252i11.17154.545Ictalurus_punctatus
ENSXCOG00000003512-8239.526ENSIPUG00000014600parp12a7739.526Ictalurus_punctatus
ENSXCOG00000003512-8239.494ENSIPUG00000014525parp12a7639.494Ictalurus_punctatus
ENSXCOG00000003512-8241.535ENSIPUG00000005344-7339.881Ictalurus_punctatus
ENSXCOG00000003512-8240.037ENSSTOG00000004578PARP128440.341Ictidomys_tridecemlineatus
ENSXCOG00000003512-8638.980ENSJJAG00000019161Parp128239.700Jaculus_jaculus
ENSXCOG00000003512-8239.703ENSKMAG00000022046parp12a7740.260Kryptolebias_marmoratus
ENSXCOG00000003512-8470.998ENSKMAG00000003066-5071.529Kryptolebias_marmoratus
ENSXCOG00000003512-8366.157ENSLBEG00000027680si:ch73-252i11.16165.939Labrus_bergylta
ENSXCOG00000003512-6049.051ENSLBEG00000009125parp12a8449.051Labrus_bergylta
ENSXCOG00000003512-8241.267ENSLBEG00000009082parp12a7441.379Labrus_bergylta
ENSXCOG00000003512-8243.786ENSLACG00000018265PARP127143.786Latimeria_chalumnae
ENSXCOG00000003512-8240.769ENSLOCG00000016964parp12a7540.577Lepisosteus_oculatus
ENSXCOG00000003512-8241.026ENSLOCG00000016455-7640.691Lepisosteus_oculatus
ENSXCOG00000003512-8947.496ENSLOCG00000016450si:ch73-252i11.17249.543Lepisosteus_oculatus
ENSXCOG00000003512-8240.262ENSLAFG00000005717PARP129040.038Loxodonta_africana
ENSXCOG00000003512-8240.607ENSMFAG00000034646PARP127440.607Macaca_fascicularis
ENSXCOG00000003512-8240.000ENSMMUG00000004224PARP127440.000Macaca_mulatta
ENSXCOG00000003512-8240.607ENSMNEG00000028999PARP127440.607Macaca_nemestrina
ENSXCOG00000003512-8240.762ENSMLEG00000036058PARP128440.607Mandrillus_leucophaeus
ENSXCOG00000003512-8242.644ENSMAMG00000001755parp12a7742.644Mastacembelus_armatus
ENSXCOG00000003512-8865.208ENSMAMG00000001483si:ch73-252i11.15067.257Mastacembelus_armatus
ENSXCOG00000003512-8240.472ENSMZEG00005017042parp12a7740.109Maylandia_zebra
ENSXCOG00000003512-8556.838ENSMZEG00005018239-7757.428Maylandia_zebra
ENSXCOG00000003512-8763.983ENSMZEG00005018251-5769.087Maylandia_zebra
ENSXCOG00000003512-8241.923ENSMGAG00000013110PARP129041.923Meleagris_gallopavo
ENSXCOG00000003512-8139.089ENSMICG00000003163PARP127439.662Microcebus_murinus
ENSXCOG00000003512-8239.851ENSMOCG00000002228Parp127440.152Microtus_ochrogaster
ENSXCOG00000003512-8242.085ENSMMOG00000019226parp12a7542.085Mola_mola
ENSXCOG00000003512-8341.573ENSMODG00000013713PARP126741.698Monodelphis_domestica
ENSXCOG00000003512-8240.481ENSMALG00000022003parp12a7740.481Monopterus_albus
ENSXCOG00000003512-8561.377ENSMALG00000003217-6761.804Monopterus_albus
ENSXCOG00000003512-8240.454MGP_CAROLIEiJ_G0028242Parp127340.000Mus_caroli
ENSXCOG00000003512-8240.454ENSMUSG00000038507Parp127340.000Mus_musculus
ENSXCOG00000003512-8240.797MGP_PahariEiJ_G0022000Parp127340.797Mus_pahari
ENSXCOG00000003512-8240.643MGP_SPRETEiJ_G0029241Parp127340.189Mus_spretus
ENSXCOG00000003512-8638.998ENSMPUG00000003682PARP128740.571Mustela_putorius_furo
ENSXCOG00000003512-8240.341ENSMLUG00000004185PARP128640.114Myotis_lucifugus
ENSXCOG00000003512-8240.114ENSNGAG00000015925Parp127440.458Nannospalax_galili
ENSXCOG00000003512-8857.790ENSNBRG00000020115si:ch73-252i11.16959.923Neolamprologus_brichardi
ENSXCOG00000003512-8240.762ENSNLEG00000001802-7040.762Nomascus_leucogenys
ENSXCOG00000003512-8838.879ENSODEG00000013738PARP128439.560Octodon_degus
ENSXCOG00000003512-8360.753ENSONIG00000009963si:ch73-252i11.19060.250Oreochromis_niloticus
ENSXCOG00000003512-8243.021ENSONIG00000010409parp12a7642.830Oreochromis_niloticus
ENSXCOG00000003512-8638.434ENSOCUG00000003213PARP128639.279Oryctolagus_cuniculus
ENSXCOG00000003512-8465.138ENSORLG00000009167si:ch73-252i11.15563.478Oryzias_latipes
ENSXCOG00000003512-8339.266ENSORLG00000016148parp12a7739.889Oryzias_latipes
ENSXCOG00000003512-8366.512ENSORLG00020005374si:ch73-252i11.16063.478Oryzias_latipes_hni
ENSXCOG00000003512-8339.450ENSORLG00020010032parp12a7740.074Oryzias_latipes_hni
ENSXCOG00000003512-6668.250ENSORLG00015002400si:ch73-252i11.17468.861Oryzias_latipes_hsok
ENSXCOG00000003512-6542.389ENSORLG00015001179parp12a6435.275Oryzias_latipes_hsok
ENSXCOG00000003512-8964.488ENSOMEG00000023360-5367.757Oryzias_melastigma
ENSXCOG00000003512-8240.150ENSOMEG00000022731parp12a7740.150Oryzias_melastigma
ENSXCOG00000003512-8241.221ENSOGAG00000008906PARP127441.221Otolemur_garnettii
ENSXCOG00000003512-8838.938ENSOARG00000012408PARP127439.544Ovis_aries
ENSXCOG00000003512-8241.333ENSPPAG00000029869PARP128140.762Pan_paniscus
ENSXCOG00000003512-8340.000ENSPPRG00000024763PARP127539.626Panthera_pardus
ENSXCOG00000003512-8340.000ENSPTIG00000018638PARP128539.626Panthera_tigris_altaica
ENSXCOG00000003512-8241.333ENSPTRG00000019761PARP127440.762Pan_troglodytes
ENSXCOG00000003512-8240.607ENSPANG00000022225PARP127440.607Papio_anubis
ENSXCOG00000003512-8949.362ENSPKIG00000018215-5252.372Paramormyrops_kingsleyae
ENSXCOG00000003512-8542.537ENSPSIG00000015130PARP129543.385Pelodiscus_sinensis
ENSXCOG00000003512-8056.790ENSPMGG00000020753si:ch73-252i11.17653.162Periophthalmus_magnuspinnatus
ENSXCOG00000003512-8341.683ENSPMGG00000006266-7740.535Periophthalmus_magnuspinnatus
ENSXCOG00000003512-8241.045ENSPEMG00000023375Parp127340.832Peromyscus_maniculatus_bairdii
ENSXCOG00000003512-6133.166ENSPMAG00000001445-9933.166Petromyzon_marinus
ENSXCOG00000003512-8243.217ENSPCIG00000016386PARP127443.107Phascolarctos_cinereus
ENSXCOG00000003512-8142.126ENSPCIG00000021651-7442.209Phascolarctos_cinereus
ENSXCOG00000003512-8484.673ENSPFOG00000009053-9584.803Poecilia_formosa
ENSXCOG00000003512-8286.765ENSPFOG00000009078-5886.957Poecilia_formosa
ENSXCOG00000003512-8238.779ENSPLAG00000006241parp12a6045.412Poecilia_latipinna
ENSXCOG00000003512-8240.693ENSPLAG00000006271-7740.693Poecilia_latipinna
ENSXCOG00000003512-8386.957ENSPLAG00000000024-5687.832Poecilia_latipinna
ENSXCOG00000003512-8240.876ENSPMEG00000014115parp12a7740.876Poecilia_mexicana
ENSXCOG00000003512-8239.138ENSPMEG00000014083parp12a7739.318Poecilia_mexicana
ENSXCOG00000003512-9377.123ENSPMEG00000016654si:ch73-252i11.16981.818Poecilia_mexicana
ENSXCOG00000003512-8240.511ENSPREG00000000674parp12a7740.511Poecilia_reticulata
ENSXCOG00000003512-8238.628ENSPREG00000000666parp12a7739.209Poecilia_reticulata
ENSXCOG00000003512-5447.041ENSPPYG00000018053-7047.041Pongo_abelii
ENSXCOG00000003512-8235.645ENSPCOG00000016258PARP127235.838Propithecus_coquereli
ENSXCOG00000003512-7138.022ENSPVAG00000003159PARP127338.022Pteropus_vampyrus
ENSXCOG00000003512-8240.472ENSPNYG00000021033parp12a7740.109Pundamilia_nyererei
ENSXCOG00000003512-8368.578ENSPNYG00000012196si:ch73-252i11.15868.235Pundamilia_nyererei
ENSXCOG00000003512-8242.578ENSPNAG00000007780-5042.747Pygocentrus_nattereri
ENSXCOG00000003512-8952.594ENSPNAG00000007770si:ch73-252i11.16455.078Pygocentrus_nattereri
ENSXCOG00000003512-8241.732ENSPNAG00000021230parp12a7041.732Pygocentrus_nattereri
ENSXCOG00000003512-8640.406ENSPNAG00000007794PARP127140.546Pygocentrus_nattereri
ENSXCOG00000003512-8240.856ENSPNAG00000021181parp12a7740.856Pygocentrus_nattereri
ENSXCOG00000003512-8241.905ENSRNOG00000008196Parp127341.524Rattus_norvegicus
ENSXCOG00000003512-8240.417ENSRBIG00000039432PARP128640.417Rhinopithecus_bieti
ENSXCOG00000003512-8240.607ENSRROG00000036363PARP127440.607Rhinopithecus_roxellana
ENSXCOG00000003512-8241.333ENSSBOG00000035883PARP128640.762Saimiri_boliviensis_boliviensis
ENSXCOG00000003512-6447.654ENSSHAG00000014045-7347.654Sarcophilus_harrisii
ENSXCOG00000003512-8240.962ENSSHAG00000005831-8740.347Sarcophilus_harrisii
ENSXCOG00000003512-8250.784ENSSFOG00015010647-7250.784Scleropages_formosus
ENSXCOG00000003512-9147.469ENSSFOG00015010708-7351.163Scleropages_formosus
ENSXCOG00000003512-8342.085ENSSFOG00015003427parp12a8642.466Scleropages_formosus
ENSXCOG00000003512-8239.963ENSSMAG00000010702parp12a7739.890Scophthalmus_maximus
ENSXCOG00000003512-8365.826ENSSMAG00000014233si:ch73-252i11.15369.042Scophthalmus_maximus
ENSXCOG00000003512-8961.011ENSSDUG00000014148si:ch73-252i11.16962.547Seriola_dumerili
ENSXCOG00000003512-8241.367ENSSDUG00000000297parp12a7741.367Seriola_dumerili
ENSXCOG00000003512-8241.772ENSSLDG00000009897parp12a7741.486Seriola_lalandi_dorsalis
ENSXCOG00000003512-8663.138ENSSLDG00000013415si:ch73-252i11.17164.591Seriola_lalandi_dorsalis
ENSXCOG00000003512-6833.864ENSSARG00000012642-7933.864Sorex_araneus
ENSXCOG00000003512-8641.144ENSSPUG00000007335PARP129442.218Sphenodon_punctatus
ENSXCOG00000003512-8240.884ENSSPAG00000020097parp12a7740.700Stegastes_partitus
ENSXCOG00000003512-8068.810ENSSPAG00000020627si:ch73-252i11.16067.606Stegastes_partitus
ENSXCOG00000003512-8340.296ENSSSCG00000016502PARP127540.301Sus_scrofa
ENSXCOG00000003512-8240.467ENSTGUG00000011354PARP127740.194Taeniopygia_guttata
ENSXCOG00000003512-8239.926ENSTRUG00000007328parp12a7739.926Takifugu_rubripes
ENSXCOG00000003512-8354.599ENSTNIG00000006913si:ch73-252i11.18655.159Tetraodon_nigroviridis
ENSXCOG00000003512-8240.741ENSTNIG00000008377parp12a8541.045Tetraodon_nigroviridis
ENSXCOG00000003512-6048.500ENSTBEG00000000837-6248.500Tupaia_belangeri
ENSXCOG00000003512-8237.665ENSTTRG00000015180PARP127337.500Tursiops_truncatus
ENSXCOG00000003512-8639.356ENSUAMG00000013122PARP127940.262Ursus_americanus
ENSXCOG00000003512-8639.356ENSUMAG00000015082PARP128340.262Ursus_maritimus
ENSXCOG00000003512-8239.777ENSVVUG00000001841PARP128639.887Vulpes_vulpes
ENSXCOG00000003512-5353.963ENSXETG00000008923-5353.963Xenopus_tropicalis
ENSXCOG00000003512-8240.693ENSXMAG00000002950-7740.693Xiphophorus_maculatus
ENSXCOG00000003512-8493.679ENSXMAG00000024405-5796.690Xiphophorus_maculatus
ENSXCOG00000003512-8241.210ENSXMAG00000021188parp12a7841.399Xiphophorus_maculatus

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